RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 C14orf144Q96I85 54 aa8.54□□□□□ -1.04
VPS52-220ENST00000493674 KLK12Q9UKR0 248 aa8.54□□□□□ -1.04
VPS52-220ENST00000493674 IGHV3OR16-9A0A0B4J2B5 98 aa8.53□□□□□ -1.04
VPS52-220ENST00000493674 TMEM223A0PJW6 202 aa8.53□□□□□ -1.04
VPS52-220ENST00000493674 SPATA45Q537H7 98 aa8.53□□□□□ -1.04
VPS52-220ENST00000493674 CLPSL2Q6UWE3 100 aa8.53□□□□□ -1.04
VPS52-220ENST00000493674 STPG4Q8N801 248 aa8.53□□□□□ -1.04
VPS52-220ENST00000493674 PAM16Q9Y3D7 125 aa8.53□□□□□ -1.04
VPS52-220ENST00000493674 TSTD3H0UI37 97 aa8.52□□□□□ -1.05
VPS52-220ENST00000493674 K7EP13 123 aa8.52□□□□□ -1.05
VPS52-220ENST00000493674 GEMIN7Q9H840 131 aaKnown RBP8.52□□□□□ -1.05
VPS52-220ENST00000493674 CDKN2A-AS1Q9UH64 79 aa8.52□□□□□ -1.05
VPS52-220ENST00000493674 IGKV2D-26A0A0A0MRZ7 120 aa8.51□□□□□ -1.05
VPS52-220ENST00000493674 TRAV8-4A0A0B4J246 113 aa8.51□□□□□ -1.05
VPS52-220ENST00000493674 IBA57-AS1B1ANH7 110 aa8.51□□□□□ -1.05
VPS52-220ENST00000493674 HSBP1L1C9JCN9 74 aa8.51□□□□□ -1.05
VPS52-220ENST00000493674 E9PLD3 99 aa8.51□□□□□ -1.05
VPS52-220ENST00000493674 SS18Q15532 418 aa8.51□□□□□ -1.05
VPS52-220ENST00000493674 MIAQ16674 131 aa8.51□□□□□ -1.05
VPS52-220ENST00000493674 TMEM170BQ5T4T1 132 aa8.51□□□□□ -1.05
VPS52-220ENST00000493674 KRTAP26-1Q6PEX3 210 aa8.51□□□□□ -1.05
VPS52-220ENST00000493674 Q9H8V8 135 aa8.51□□□□□ -1.05
VPS52-220ENST00000493674 IGKV3OR2-268A0A0C4DH90 116 aa8.5□□□□□ -1.05
VPS52-220ENST00000493674 IGLV5-39A0A0G2JS06 123 aa8.5□□□□□ -1.05
VPS52-220ENST00000493674 A0A1B0GV90 55 aa8.5□□□□□ -1.05
VPS52-220ENST00000493674 DDTP30046 118 aa8.5□□□□□ -1.05
VPS52-220ENST00000493674 CD164L2Q6UWJ8 174 aa8.5□□□□□ -1.05
VPS52-220ENST00000493674 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
VPS52-220ENST00000493674 C10orf126Q8N4M7 172 aa8.5□□□□□ -1.05
VPS52-220ENST00000493674 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
VPS52-220ENST00000493674 A0A087WZ39 114 aa8.49□□□□□ -1.05
VPS52-220ENST00000493674 SMIM1B2RUZ4 78 aa8.49□□□□□ -1.05
VPS52-220ENST00000493674 CRPP02741 224 aa8.49□□□□□ -1.05
VPS52-220ENST00000493674 HERVK_113P61574 105 aa8.49□□□□□ -1.05
VPS52-220ENST00000493674 FOXI1Q12951 378 aa8.49□□□□□ -1.05
VPS52-220ENST00000493674 UBE2DNLQ8IWF7 75 aa8.49□□□□□ -1.05
VPS52-220ENST00000493674 UBE2WQ96B02 151 aa8.49□□□□□ -1.05
VPS52-220ENST00000493674 LCE6AA0A183 80 aa8.48□□□□□ -1.05
VPS52-220ENST00000493674 H3BRM9 83 aa8.48□□□□□ -1.05
VPS52-220ENST00000493674 KRTAP1-5Q9BYS1 174 aa8.48□□□□□ -1.05
VPS52-220ENST00000493674 IGLV10-54A0A075B6I4 117 aa8.47□□□□□ -1.05
VPS52-220ENST00000493674 IGHV1-58A0A0C4DH39 117 aa8.47□□□□□ -1.05
VPS52-220ENST00000493674 LEPROTO15243 131 aa8.47□□□□□ -1.05
VPS52-220ENST00000493674 COX8AP10176 69 aa8.47□□□□□ -1.05
VPS52-220ENST00000493674 XCL1P47992 114 aa8.47□□□□□ -1.05
VPS52-220ENST00000493674 TSPEAR-AS2P59090 65 aa8.47□□□□□ -1.05
VPS52-220ENST00000493674 TRAV8-3A0A0A6YYJ7 113 aa8.46□□□□□ -1.06
VPS52-220ENST00000493674 DLEU1O43261 78 aa8.46□□□□□ -1.06
VPS52-220ENST00000493674 SPINK8P0C7L1 97 aa8.46□□□□□ -1.06
VPS52-220ENST00000493674 PRO1933Q9H354 126 aa8.46□□□□□ -1.06
VPS52-220ENST00000493674 RYR2Q92736 4967 aa8.46□□□□□ -1.06
VPS52-220ENST00000493674 RYR3Q15413 4870 aa8.46□□□□□ -1.06
VPS52-220ENST00000493674 DNAH10Q8IVF4 4471 aa8.46□□□□□ -1.06
VPS52-220ENST00000493674 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
VPS52-220ENST00000493674 PCP2Q8IVA1 136 aa8.45□□□□□ -1.06
VPS52-220ENST00000493674 BOD1L2Q8IYS8 172 aa8.45□□□□□ -1.06
VPS52-220ENST00000493674 PLEKHB2Q96CS7 222 aa8.45□□□□□ -1.06
VPS52-220ENST00000493674 J3QQQ9 107 aa8.44□□□□□ -1.06
VPS52-220ENST00000493674 COX7A2LO14548 114 aa8.44□□□□□ -1.06
VPS52-220ENST00000493674 NMUP48645 174 aa8.44□□□□□ -1.06
VPS52-220ENST00000493674 C5orf38Q86SI9 138 aa8.44□□□□□ -1.06
VPS52-220ENST00000493674 LINC00476Q8WZB0 136 aa8.44□□□□□ -1.06
VPS52-220ENST00000493674 NBDYA0A0U1RRE5 68 aa8.43□□□□□ -1.06
VPS52-220ENST00000493674 TTC32Q5I0X7 151 aa8.43□□□□□ -1.06
VPS52-220ENST00000493674 MAPKAPK5-AS1Q8N8E1 139 aa8.43□□□□□ -1.06
VPS52-220ENST00000493674 MIEN1Q9BRT3 115 aa8.43□□□□□ -1.06
VPS52-220ENST00000493674 C1orf43Q9BWL3 253 aa8.43□□□□□ -1.06
VPS52-220ENST00000493674 TTTY13Q9BZ97 58 aa8.43□□□□□ -1.06
VPS52-220ENST00000493674 TP73-AS1Q9UF72 201 aa8.43□□□□□ -1.06
VPS52-220ENST00000493674 KMT2AQ03164 3969 aa8.42□□□□□ -1.06
VPS52-220ENST00000493674 IGHV3-64A0A075B6Q5 118 aa8.42□□□□□ -1.06
VPS52-220ENST00000493674 SLC25A34Q6PIV7 304 aa8.42□□□□□ -1.06
VPS52-220ENST00000493674 UQCR10Q9UDW1 63 aa8.42□□□□□ -1.06
VPS52-220ENST00000493674 KIAA0087Q14695 138 aa8.41□□□□□ -1.06
VPS52-220ENST00000493674 RMI2Q96E14 147 aa8.41□□□□□ -1.06
VPS52-220ENST00000493674 Q9HAA7 133 aa8.41□□□□□ -1.06
VPS52-220ENST00000493674 DNAH2Q9P225 4427 aa8.41□□□□□ -1.06
VPS52-220ENST00000493674 HYDINQ4G0P3 5121 aa8.4□□□□□ -1.06
VPS52-220ENST00000493674 IGKV2D-24A0A075B6R9 120 aa8.4□□□□□ -1.06
VPS52-220ENST00000493674 NDUFA1O15239 70 aa8.4□□□□□ -1.06
VPS52-220ENST00000493674 LGALS3P17931 250 aaKnown RBP8.4□□□□□ -1.06
VPS52-220ENST00000493674 Q6ZR54 194 aa8.4□□□□□ -1.06
VPS52-220ENST00000493674 C2orf91Q6ZV80 131 aa8.4□□□□□ -1.06
VPS52-220ENST00000493674 Q8IZM0 81 aa8.4□□□□□ -1.06
VPS52-220ENST00000493674 COX7B2Q8TF08 81 aa8.4□□□□□ -1.06
VPS52-220ENST00000493674 ZNF625Q96I27 306 aaPredicted RBP8.4□□□□□ -1.06
VPS52-220ENST00000493674 MYMXA0A1B0GTQ4 84 aa8.39□□□□□ -1.07
VPS52-220ENST00000493674 ZNF815PA8K554 130 aa8.39□□□□□ -1.07
VPS52-220ENST00000493674 C15orf56Q8N910 161 aa8.39□□□□□ -1.07
VPS52-220ENST00000493674 COX11Q9Y6N1 276 aa8.39□□□□□ -1.07
VPS52-220ENST00000493674 APOMO95445 188 aa8.38□□□□□ -1.07
VPS52-220ENST00000493674 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
VPS52-220ENST00000493674 ORAOV1Q8WV07 137 aa8.38□□□□□ -1.07
VPS52-220ENST00000493674 HIGD1BQ9P298 99 aa8.38□□□□□ -1.07
VPS52-220ENST00000493674 NDUFA12Q9UI09 145 aa8.38□□□□□ -1.07
VPS52-220ENST00000493674 GVQW2A0A096LPI5 108 aaPredicted RBP8.37□□□□□ -1.07
VPS52-220ENST00000493674 LY6G6CO95867 125 aa8.37□□□□□ -1.07
VPS52-220ENST00000493674 MALP21145 153 aa8.37□□□□□ -1.07
VPS52-220ENST00000493674 TM2D2Q9BX73 214 aa8.36□□□□□ -1.07
VPS52-220ENST00000493674 CBY1Q9Y3M2 126 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms