RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 IGIPA6NJ69 53 aa7.58□□□□□ -1.2
CTSA-209ENST00000493522 PRSS1P07477 247 aa7.58□□□□□ -1.2
CTSA-209ENST00000493522 LINC00614P0C842 121 aa7.58□□□□□ -1.2
CTSA-209ENST00000493522 CD164L2Q6UWJ8 174 aa7.58□□□□□ -1.2
CTSA-209ENST00000493522 C15orf56Q8N910 161 aa7.58□□□□□ -1.2
CTSA-209ENST00000493522 URB1-AS1Q96HZ7 61 aa7.58□□□□□ -1.2
CTSA-209ENST00000493522 TIMM17AQ99595 171 aa7.58□□□□□ -1.2
CTSA-209ENST00000493522 LINC01549A6NIU2 74 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 HBDP02042 147 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 NPSP0C0P6 89 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 S100A1P23297 94 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 GCSHP23434 173 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 XGP55808 180 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 PMCHL1Q16048 86 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 PAPPA-AS1Q5QFB9 102 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 ZC2HC1BQ5TFG8 222 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 CFAP161Q6P656 301 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 LINC00173Q6ZV60 143 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 VCX2Q9H322 139 aa7.57□□□□□ -1.2
CTSA-209ENST00000493522 SRRM2Q9UQ35 2752 aaKnown RBP7.57□□□□□ -1.2
CTSA-209ENST00000493522 COX7A2LO14548 114 aa7.56□□□□□ -1.2
CTSA-209ENST00000493522 MALP21145 153 aa7.56□□□□□ -1.2
CTSA-209ENST00000493522 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
CTSA-209ENST00000493522 ERASQ7Z444 233 aa7.56□□□□□ -1.2
CTSA-209ENST00000493522 BAGE3Q86Y29 109 aa7.56□□□□□ -1.2
CTSA-209ENST00000493522 A0A096LNJ9 63 aa7.55□□□□□ -1.2
CTSA-209ENST00000493522 IGHV1-58A0A0C4DH39 117 aa7.55□□□□□ -1.2
CTSA-209ENST00000493522 KRTAP10-1P60331 282 aa7.55□□□□□ -1.2
CTSA-209ENST00000493522 C5orf38Q86SI9 138 aa7.55□□□□□ -1.2
CTSA-209ENST00000493522 CHCHD1Q96BP2 118 aaKnown RBP7.55□□□□□ -1.2
CTSA-209ENST00000493522 AMELXQ99217 191 aa7.55□□□□□ -1.2
CTSA-209ENST00000493522 GVQW2A0A096LPI5 108 aaPredicted RBP7.54□□□□□ -1.2
CTSA-209ENST00000493522 UBE2D1P51668 147 aa7.54□□□□□ -1.2
CTSA-209ENST00000493522 LINC01620Q4KN68 170 aa7.54□□□□□ -1.2
CTSA-209ENST00000493522 FLG2Q5D862 2391 aaPredicted RBP7.54□□□□□ -1.2
CTSA-209ENST00000493522 DNAH8Q96JB1 4490 aa7.53□□□□□ -1.2
CTSA-209ENST00000493522 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.53□□□□□ -1.2
CTSA-209ENST00000493522 FAM229AH3BQW9 127 aa7.53□□□□□ -1.2
CTSA-209ENST00000493522 HSBP1O75506 76 aa7.53□□□□□ -1.2
CTSA-209ENST00000493522 APOMO95445 188 aa7.53□□□□□ -1.2
CTSA-209ENST00000493522 LINC00242Q5T6M2 205 aa7.53□□□□□ -1.2
CTSA-209ENST00000493522 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.52□□□□□ -1.21
CTSA-209ENST00000493522 IGHV3OR16-9A0A0B4J2B5 98 aa7.52□□□□□ -1.21
CTSA-209ENST00000493522 ZNF561-AS1K7EIQ3 104 aa7.52□□□□□ -1.21
CTSA-209ENST00000493522 SERF1AO75920 110 aa7.52□□□□□ -1.21
CTSA-209ENST00000493522 LINC00526Q96FQ7 95 aa7.52□□□□□ -1.21
CTSA-209ENST00000493522 ATP5LO75964 103 aa7.51□□□□□ -1.21
CTSA-209ENST00000493522 SMR3BP02814 79 aaPredicted RBP7.51□□□□□ -1.21
CTSA-209ENST00000493522 NDUFA6P56556 154 aa7.51□□□□□ -1.21
CTSA-209ENST00000493522 CNBPP62633 177 aaKnown RBP7.51□□□□□ -1.21
CTSA-209ENST00000493522 COX6A2Q02221 97 aa7.51□□□□□ -1.21
CTSA-209ENST00000493522 SPAG11BQ08648 103 aa7.51□□□□□ -1.21
CTSA-209ENST00000493522 PMVKQ15126 192 aa7.51□□□□□ -1.21
CTSA-209ENST00000493522 PDZD11Q5EBL8 140 aa7.51□□□□□ -1.21
CTSA-209ENST00000493522 LINC00528Q8N1L1 170 aa7.51□□□□□ -1.21
CTSA-209ENST00000493522 ORAOV1Q8WV07 137 aa7.51□□□□□ -1.21
CTSA-209ENST00000493522 GEMIN7Q9H840 131 aaKnown RBP7.51□□□□□ -1.21
CTSA-209ENST00000493522 A0A0J9YXV3 536 aa7.5□□□□□ -1.21
CTSA-209ENST00000493522 HERVK_113P63121 156 aa7.5□□□□□ -1.21
CTSA-209ENST00000493522 SEC11AP67812 179 aa7.5□□□□□ -1.21
CTSA-209ENST00000493522 FAM19A2Q8N3H0 131 aa7.5□□□□□ -1.21
CTSA-209ENST00000493522 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
CTSA-209ENST00000493522 IGLV4-69A0A075B6H9 119 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 A0A087WZ39 114 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 HIST1H2BKO60814 126 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 SLPIP03973 132 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 HIST1H2BJP06899 126 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 LORP23490 312 aaPredicted RBP7.49□□□□□ -1.21
CTSA-209ENST00000493522 HIST1H2BOP23527 126 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 HIST1H2BBP33778 126 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 HIST1H2BDP58876 126 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 LINC00310P59036 64 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 HIST1H2BCP62807 126 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 HIST2H2BEQ16778 126 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.49□□□□□ -1.21
CTSA-209ENST00000493522 FAM19A3Q7Z5A8 133 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 C9orf163Q8N9P6 203 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 OR10D4PQ8NGN7 298 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 HIST1H2BHQ93079 126 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 CARD19Q96LW7 228 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 HIST1H2BNQ99877 126 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 HIST1H2BMQ99879 126 aa7.49□□□□□ -1.21
CTSA-209ENST00000493522 IGHV3-64A0A075B6Q5 118 aa7.48□□□□□ -1.21
CTSA-209ENST00000493522 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
CTSA-209ENST00000493522 PACRGQ96M98 296 aaPredicted RBP7.48□□□□□ -1.21
CTSA-209ENST00000493522 CAMK2N2Q96S95 79 aa7.48□□□□□ -1.21
CTSA-209ENST00000493522 CHAC1Q9BUX1 264 aa7.48□□□□□ -1.21
CTSA-209ENST00000493522 TINCRA0A1B0GVN0 87 aa7.47□□□□□ -1.21
CTSA-209ENST00000493522 HAMPP81172 84 aa7.47□□□□□ -1.21
CTSA-209ENST00000493522 SYCNQ0VAF6 134 aa7.47□□□□□ -1.21
CTSA-209ENST00000493522 IFI27L1Q96BM0 104 aa7.47□□□□□ -1.21
CTSA-209ENST00000493522 CDKN2A-AS1Q9UH64 79 aa7.47□□□□□ -1.21
CTSA-209ENST00000493522 HMCN2Q8NDA2 5059 aa7.47□□□□□ -1.21
CTSA-209ENST00000493522 NUPR1O60356 82 aa7.46□□□□□ -1.22
CTSA-209ENST00000493522 LINC01561Q8N1V8 128 aa7.46□□□□□ -1.22
CTSA-209ENST00000493522 C2orf48Q96LS8 159 aa7.46□□□□□ -1.22
CTSA-209ENST00000493522 FAM30AQ9NZY2 134 aa7.46□□□□□ -1.22
CTSA-209ENST00000493522 TOMM7Q9P0U1 55 aa7.46□□□□□ -1.22
CTSA-209ENST00000493522 H0Y8G0 127 aa7.45□□□□□ -1.22
CTSA-209ENST00000493522 LEPROTL1O95214 131 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms