RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 CHCHD10Q8WYQ3 142 aaPredicted RBP8.97□□□□□ -0.97
MSH6-208ENST00000493177 CHTOPQ9Y3Y2 248 aaKnown RBP8.97□□□□□ -0.97
MSH6-208ENST00000493177 FAT2Q9NYQ8 4349 aa8.96□□□□□ -0.97
MSH6-208ENST00000493177 A0A0J9YXV3 536 aa8.96□□□□□ -0.98
MSH6-208ENST00000493177 GAGE12HA6NDE8 117 aa8.96□□□□□ -0.98
MSH6-208ENST00000493177 SYS1-DBNDD2H3BUS1 97 aa8.96□□□□□ -0.98
MSH6-208ENST00000493177 C3orf79P0CE67 100 aa8.96□□□□□ -0.98
MSH6-208ENST00000493177 TM2D2Q9BX73 214 aa8.96□□□□□ -0.98
MSH6-208ENST00000493177 PSCAO43653 123 aa8.95□□□□□ -0.98
MSH6-208ENST00000493177 SEC11AP67812 179 aa8.95□□□□□ -0.98
MSH6-208ENST00000493177 GEMIN7Q9H840 131 aaKnown RBP8.95□□□□□ -0.98
MSH6-208ENST00000493177 LINC00242Q5T6M2 205 aa8.94□□□□□ -0.98
MSH6-208ENST00000493177 PET117Q6UWS5 81 aa8.94□□□□□ -0.98
MSH6-208ENST00000493177 OR10D4PQ8NGN7 298 aa8.94□□□□□ -0.98
MSH6-208ENST00000493177 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
MSH6-208ENST00000493177 MRPL35Q9NZE8 188 aaKnown RBP8.94□□□□□ -0.98
MSH6-208ENST00000493177 COX11Q9Y6N1 276 aa8.94□□□□□ -0.98
MSH6-208ENST00000493177 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
MSH6-208ENST00000493177 C20orf202A1L168 122 aa8.93□□□□□ -0.98
MSH6-208ENST00000493177 F8VRH5 84 aa8.93□□□□□ -0.98
MSH6-208ENST00000493177 HERVK_113P63121 156 aa8.93□□□□□ -0.98
MSH6-208ENST00000493177 COX6A2Q02221 97 aa8.93□□□□□ -0.98
MSH6-208ENST00000493177 ODF1Q14990 250 aa8.93□□□□□ -0.98
MSH6-208ENST00000493177 CD164L2Q6UWJ8 174 aa8.93□□□□□ -0.98
MSH6-208ENST00000493177 CHAC1Q9BUX1 264 aa8.93□□□□□ -0.98
MSH6-208ENST00000493177 IGLV4-69A0A075B6H9 119 aa8.92□□□□□ -0.98
MSH6-208ENST00000493177 IGLC3P0DOY3 106 aa8.92□□□□□ -0.98
MSH6-208ENST00000493177 Q6ZRN7 208 aaPredicted RBP8.92□□□□□ -0.98
MSH6-208ENST00000493177 FAM19A3Q7Z5A8 133 aa8.92□□□□□ -0.98
MSH6-208ENST00000493177 C5orf38Q86SI9 138 aa8.92□□□□□ -0.98
MSH6-208ENST00000493177 LINC00469Q8N7U9 141 aa8.92□□□□□ -0.98
MSH6-208ENST00000493177 DPM2O94777 84 aa8.91□□□□□ -0.98
MSH6-208ENST00000493177 FOXI1Q12951 378 aa8.91□□□□□ -0.98
MSH6-208ENST00000493177 C11orf86A6NJI1 115 aa8.9□□□□□ -0.98
MSH6-208ENST00000493177 COX7A2LO14548 114 aa8.9□□□□□ -0.98
MSH6-208ENST00000493177 IGKCP01834 107 aa8.9□□□□□ -0.98
MSH6-208ENST00000493177 MALP21145 153 aa8.9□□□□□ -0.98
MSH6-208ENST00000493177 KRTAP10-2P60368 255 aa8.9□□□□□ -0.98
MSH6-208ENST00000493177 TMEM170BQ5T4T1 132 aa8.9□□□□□ -0.98
MSH6-208ENST00000493177 LINC01545Q5VT33 79 aa8.9□□□□□ -0.98
MSH6-208ENST00000493177 KRTAP26-1Q6PEX3 210 aa8.9□□□□□ -0.98
MSH6-208ENST00000493177 PKD1P98161 4303 aa8.89□□□□□ -0.99
MSH6-208ENST00000493177 H3BRM9 83 aa8.89□□□□□ -0.99
MSH6-208ENST00000493177 SCGB1D1O95968 90 aa8.89□□□□□ -0.99
MSH6-208ENST00000493177 PLNP26678 52 aa8.89□□□□□ -0.99
MSH6-208ENST00000493177 AKR1D1P51857 326 aa8.89□□□□□ -0.99
MSH6-208ENST00000493177 CDKN2A-AS1Q9UH64 79 aa8.89□□□□□ -0.99
MSH6-208ENST00000493177 A0A087WTM6 91 aa8.88□□□□□ -0.99
MSH6-208ENST00000493177 IGHV3OR16-9A0A0B4J2B5 98 aa8.88□□□□□ -0.99
MSH6-208ENST00000493177 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
MSH6-208ENST00000493177 PGPEP1Q9NXJ5 209 aa8.88□□□□□ -0.99
MSH6-208ENST00000493177 LECT2O14960 151 aa8.87□□□□□ -0.99
MSH6-208ENST00000493177 CDK2AP2O75956 126 aa8.87□□□□□ -0.99
MSH6-208ENST00000493177 APOMO95445 188 aa8.87□□□□□ -0.99
MSH6-208ENST00000493177 DYNC1H1Q14204 4646 aaKnown RBP8.87□□□□□ -0.99
MSH6-208ENST00000493177 IGLV5-45A0A087WSX0 123 aa8.86□□□□□ -0.99
MSH6-208ENST00000493177 A0A087WZ39 114 aa8.86□□□□□ -0.99
MSH6-208ENST00000493177 SPINK8P0C7L1 97 aa8.86□□□□□ -0.99
MSH6-208ENST00000493177 FUSP35637 526 aaKnown RBP eCLIP8.86□□□□□ -0.99
MSH6-208ENST00000493177 CDPF1Q6NVV7 123 aa8.86□□□□□ -0.99
MSH6-208ENST00000493177 CFAP161Q6P656 301 aa8.86□□□□□ -0.99
MSH6-208ENST00000493177 ATOH7Q8N100 152 aa8.86□□□□□ -0.99
MSH6-208ENST00000493177 MAPKAPK5-AS1Q8N8E1 139 aa8.86□□□□□ -0.99
MSH6-208ENST00000493177 DNAH11Q96DT5 4516 aa8.85□□□□□ -0.99
MSH6-208ENST00000493177 PKHD1P08F94 4074 aa8.85□□□□□ -0.99
MSH6-208ENST00000493177 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
MSH6-208ENST00000493177 IGHV3-64A0A075B6Q5 118 aa8.85□□□□□ -0.99
MSH6-208ENST00000493177 IGHV1-58A0A0C4DH39 117 aa8.85□□□□□ -0.99
MSH6-208ENST00000493177 HERVK_113P61574 105 aa8.85□□□□□ -0.99
MSH6-208ENST00000493177 ORAOV1Q8WV07 137 aa8.85□□□□□ -0.99
MSH6-208ENST00000493177 HERC2O95714 4834 aa8.84□□□□□ -0.99
MSH6-208ENST00000493177 USP17L23D6RBM5 183 aa8.84□□□□□ -0.99
MSH6-208ENST00000493177 HIGD2BQ4VC39 106 aa8.84□□□□□ -0.99
MSH6-208ENST00000493177 LINC01561Q8N1V8 128 aa8.84□□□□□ -0.99
MSH6-208ENST00000493177 TOMM7Q9P0U1 55 aa8.84□□□□□ -0.99
MSH6-208ENST00000493177 TMEM223A0PJW6 202 aa8.83□□□□□ -1
MSH6-208ENST00000493177 IGLV5-52A0A0A0MRZ9 124 aa8.82□□□□□ -1
MSH6-208ENST00000493177 hDV102S1A0JD36 115 aa8.82□□□□□ -1
MSH6-208ENST00000493177 SMIM1B2RUZ4 78 aa8.82□□□□□ -1
MSH6-208ENST00000493177 PRSS2P07478 247 aa8.82□□□□□ -1
MSH6-208ENST00000493177 SPAG11BQ08648 103 aa8.82□□□□□ -1
MSH6-208ENST00000493177 WFDC2Q14508 124 aa8.82□□□□□ -1
MSH6-208ENST00000493177 JOSD1Q15040 202 aaPredicted RBP8.82□□□□□ -1
MSH6-208ENST00000493177 C14orf177Q52M58 125 aa8.82□□□□□ -1
MSH6-208ENST00000493177 C15orf56Q8N910 161 aa8.82□□□□□ -1
MSH6-208ENST00000493177 ZNF561-AS1K7EIQ3 104 aa8.81□□□□□ -1
MSH6-208ENST00000493177 STPG4Q8N801 248 aa8.81□□□□□ -1
MSH6-208ENST00000493177 LOC105371267A0A1B0GV96 52 aa8.8□□□□□ -1
MSH6-208ENST00000493177 LRCOL1A6NCL2 159 aa8.8□□□□□ -1
MSH6-208ENST00000493177 HSBP1L1C9JCN9 74 aa8.8□□□□□ -1
MSH6-208ENST00000493177 GCSHP23434 173 aa8.8□□□□□ -1
MSH6-208ENST00000493177 Q8N814 137 aa8.8□□□□□ -1
MSH6-208ENST00000493177 COX7B2Q8TF08 81 aa8.8□□□□□ -1
MSH6-208ENST00000493177 NTN5Q8WTR8 489 aaPredicted RBP8.8□□□□□ -1
MSH6-208ENST00000493177 LINC00526Q96FQ7 95 aa8.8□□□□□ -1
MSH6-208ENST00000493177 GVQW2A0A096LPI5 108 aaPredicted RBP8.79□□□□□ -1
MSH6-208ENST00000493177 C6orf226Q5I0X4 101 aa8.79□□□□□ -1
MSH6-208ENST00000493177 PYY3Q5JQD4 70 aa8.79□□□□□ -1
MSH6-208ENST00000493177 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.78□□□□□ -1
MSH6-208ENST00000493177 IGLV5-39A0A0G2JS06 123 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms