RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 UBE2D1P51668 147 aa8.16□□□□□ -1.1
SAMM50-204ENST00000493161 KIR2DL4Q99706 377 aa8.16□□□□□ -1.1
SAMM50-204ENST00000493161 M0QXV9 152 aa8.15□□□□□ -1.1
SAMM50-204ENST00000493161 LINC01551Q86U37 167 aa8.15□□□□□ -1.1
SAMM50-204ENST00000493161 SLC51BQ86UW2 128 aa8.15□□□□□ -1.1
SAMM50-204ENST00000493161 SMDT1Q9H4I9 107 aa8.15□□□□□ -1.1
SAMM50-204ENST00000493161 UBE2BP63146 152 aa8.14□□□□□ -1.11
SAMM50-204ENST00000493161 SMAGPQ0VAQ4 97 aa8.14□□□□□ -1.11
SAMM50-204ENST00000493161 MRPL51Q4U2R6 128 aaKnown RBP8.14□□□□□ -1.11
SAMM50-204ENST00000493161 LCE2AQ5TA79 106 aaPredicted RBP8.14□□□□□ -1.11
SAMM50-204ENST00000493161 F8WDY8 70 aa8.13□□□□□ -1.11
SAMM50-204ENST00000493161 TSPAN13O95857 204 aa8.13□□□□□ -1.11
SAMM50-204ENST00000493161 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
SAMM50-204ENST00000493161 TMEM241Q24JQ0 296 aa8.13□□□□□ -1.11
SAMM50-204ENST00000493161 C9orf129Q5T035 196 aaKnown RBP8.13□□□□□ -1.11
SAMM50-204ENST00000493161 V9GYV3 84 aa8.13□□□□□ -1.11
SAMM50-204ENST00000493161 A0A0U1RQV1 116 aa8.12□□□□□ -1.11
SAMM50-204ENST00000493161 PPP1R17O96001 155 aa8.12□□□□□ -1.11
SAMM50-204ENST00000493161 RPL13AP40429 203 aaKnown RBP8.12□□□□□ -1.11
SAMM50-204ENST00000493161 RIGQ13278 110 aa8.12□□□□□ -1.11
SAMM50-204ENST00000493161 C2orf82Q6UX34 121 aa8.12□□□□□ -1.11
SAMM50-204ENST00000493161 TMEM18Q96B42 140 aa8.12□□□□□ -1.11
SAMM50-204ENST00000493161 SMIM7Q9BQ49 75 aa8.12□□□□□ -1.11
SAMM50-204ENST00000493161 OSTCQ9NRP0 149 aa8.12□□□□□ -1.11
SAMM50-204ENST00000493161 PPP1R2P9O14990 202 aa8.11□□□□□ -1.11
SAMM50-204ENST00000493161 FAM104BQ5XKR9 115 aa8.11□□□□□ -1.11
SAMM50-204ENST00000493161 IFITM10A6NMD0 228 aa8.1□□□□□ -1.11
SAMM50-204ENST00000493161 ALKAL2Q6UX46 152 aa8.1□□□□□ -1.11
SAMM50-204ENST00000493161 CARHSP1Q9Y2V2 147 aaKnown RBP8.1□□□□□ -1.11
SAMM50-204ENST00000493161 TRBV24-1A0A075B6N3 115 aa8.09□□□□□ -1.11
SAMM50-204ENST00000493161 TCAPO15273 167 aa8.09□□□□□ -1.11
SAMM50-204ENST00000493161 MRPS36P82909 103 aaKnown RBP8.09□□□□□ -1.11
SAMM50-204ENST00000493161 TCTE3Q8IZS6 198 aa8.09□□□□□ -1.11
SAMM50-204ENST00000493161 C20orf78Q9BR46 151 aa8.09□□□□□ -1.11
SAMM50-204ENST00000493161 SPANXA1Q9NS26 97 aa8.09□□□□□ -1.11
SAMM50-204ENST00000493161 KRTAP9-6A0A140TA67 174 aa8.08□□□□□ -1.12
SAMM50-204ENST00000493161 ZNF727A8MUV8 499 aa8.08□□□□□ -1.12
SAMM50-204ENST00000493161 NDUFC2-KCTD14E9PQ53 114 aa8.08□□□□□ -1.12
SAMM50-204ENST00000493161 ZNF861PO60384 105 aa8.08□□□□□ -1.12
SAMM50-204ENST00000493161 TNFRSF6BO95407 300 aa8.08□□□□□ -1.12
SAMM50-204ENST00000493161 CKS2P33552 79 aa8.08□□□□□ -1.12
SAMM50-204ENST00000493161 RPL32P62910 135 aaKnown RBP8.08□□□□□ -1.12
SAMM50-204ENST00000493161 HBBP68871 147 aa8.08□□□□□ -1.12
SAMM50-204ENST00000493161 BLOC1S1P78537 153 aa8.08□□□□□ -1.12
SAMM50-204ENST00000493161 SMIM2Q9BVW6 85 aa8.08□□□□□ -1.12
SAMM50-204ENST00000493161 A0A087X002 238 aa8.07□□□□□ -1.12
SAMM50-204ENST00000493161 SRP19P09132 144 aaKnown RBP8.07□□□□□ -1.12
SAMM50-204ENST00000493161 LINC00242Q5T6M2 205 aa8.07□□□□□ -1.12
SAMM50-204ENST00000493161 EIF5A2Q9GZV4 153 aaKnown RBP8.07□□□□□ -1.12
SAMM50-204ENST00000493161 NAT8BQ9UHF3 227 aa8.07□□□□□ -1.12
SAMM50-204ENST00000493161 TGIF2-C20orf24A0A0A6YYL0 155 aa8.06□□□□□ -1.12
SAMM50-204ENST00000493161 TRBV30A0A0K0K1B3 111 aa8.06□□□□□ -1.12
SAMM50-204ENST00000493161 LINC00862A6NCI5 91 aa8.06□□□□□ -1.12
SAMM50-204ENST00000493161 NPYP01303 97 aa8.06□□□□□ -1.12
SAMM50-204ENST00000493161 FAM74A3Q4VXF1 159 aa8.06□□□□□ -1.12
SAMM50-204ENST00000493161 D6R8Y8 96 aa8.05□□□□□ -1.12
SAMM50-204ENST00000493161 LINC00469Q8N7U9 141 aa8.05□□□□□ -1.12
SAMM50-204ENST00000493161 SMIM27A0A1W2PRY6 76 aa8.04□□□□□ -1.12
SAMM50-204ENST00000493161 CTDSP1Q9GZU7 261 aa8.04□□□□□ -1.12
SAMM50-204ENST00000493161 C22orf24Q9Y442 160 aa8.04□□□□□ -1.12
SAMM50-204ENST00000493161 IGLV4-3A0A075B6K6 122 aa8.03□□□□□ -1.12
SAMM50-204ENST00000493161 RPL23P62829 140 aaKnown RBP8.03□□□□□ -1.12
SAMM50-204ENST00000493161 ZC2HC1BQ5TFG8 222 aa8.03□□□□□ -1.12
SAMM50-204ENST00000493161 PACRGQ96M98 296 aaPredicted RBP8.03□□□□□ -1.12
SAMM50-204ENST00000493161 XAGE1AQ9HD64 81 aa8.03□□□□□ -1.12
SAMM50-204ENST00000493161 ANAPC11Q9NYG5 84 aa8.03□□□□□ -1.12
SAMM50-204ENST00000493161 RETNLBQ9BQ08 111 aa8.02□□□□□ -1.13
SAMM50-204ENST00000493161 NUPR1O60356 82 aa8.01□□□□□ -1.13
SAMM50-204ENST00000493161 IFI27P40305 119 aaPredicted RBP8.01□□□□□ -1.13
SAMM50-204ENST00000493161 ADIRFQ15847 76 aa8.01□□□□□ -1.13
SAMM50-204ENST00000493161 MRPL54Q6P161 138 aaKnown RBP8.01□□□□□ -1.13
SAMM50-204ENST00000493161 TYMSOSQ8TAI1 123 aa8.01□□□□□ -1.13
SAMM50-204ENST00000493161 C9JQL5 133 aa8□□□□□ -1.13
SAMM50-204ENST00000493161 TMEM141Q96I45 108 aa8□□□□□ -1.13
SAMM50-204ENST00000493161 PYGO1Q9Y3Y4 419 aa8□□□□□ -1.13
SAMM50-204ENST00000493161 MUC17Q685J3 4493 aa7.99□□□□□ -1.13
SAMM50-204ENST00000493161 A0A1B0GW15 77 aa7.99□□□□□ -1.13
SAMM50-204ENST00000493161 A0A1B0GXF2 115 aa7.99□□□□□ -1.13
SAMM50-204ENST00000493161 CRYGAP11844 174 aa7.99□□□□□ -1.13
SAMM50-204ENST00000493161 KRTAP13-2Q52LG2 175 aa7.99□□□□□ -1.13
SAMM50-204ENST00000493161 LINC00173Q6ZV60 143 aa7.99□□□□□ -1.13
SAMM50-204ENST00000493161 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
SAMM50-204ENST00000493161 BCE1O60756 84 aa7.98□□□□□ -1.13
SAMM50-204ENST00000493161 RAB5AP20339 215 aa7.98□□□□□ -1.13
SAMM50-204ENST00000493161 LBHQ53QV2 105 aaPredicted RBP7.98□□□□□ -1.13
SAMM50-204ENST00000493161 LINC01561Q8N1V8 128 aa7.98□□□□□ -1.13
SAMM50-204ENST00000493161 RPL37AP8A6NKH3 93 aa7.97□□□□□ -1.13
SAMM50-204ENST00000493161 RPL28P46779 137 aaKnown RBP7.97□□□□□ -1.13
SAMM50-204ENST00000493161 CKS1BP61024 79 aa7.97□□□□□ -1.13
SAMM50-204ENST00000493161 TEX43Q6ZNM6 134 aa7.97□□□□□ -1.13
SAMM50-204ENST00000493161 MRPL55Q7Z7F7 128 aaKnown RBP7.97□□□□□ -1.13
SAMM50-204ENST00000493161 F8W036 122 aa7.96□□□□□ -1.14
SAMM50-204ENST00000493161 PPBPP02775 128 aa7.96□□□□□ -1.14
SAMM50-204ENST00000493161 PRSS2P07478 247 aa7.96□□□□□ -1.14
SAMM50-204ENST00000493161 SRSF3P84103 164 aaKnown RBP7.96□□□□□ -1.14
SAMM50-204ENST00000493161 C6orf226Q5I0X4 101 aa7.96□□□□□ -1.14
SAMM50-204ENST00000493161 Q6ZN92 141 aa7.96□□□□□ -1.14
SAMM50-204ENST00000493161 PRELID3AQ96N28 172 aa7.96□□□□□ -1.14
SAMM50-204ENST00000493161 NAT8Q9UHE5 227 aa7.96□□□□□ -1.14
SAMM50-204ENST00000493161 LOC389332A0A1B0GUA5 103 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms