RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 HHLA3Q9XRX5 114 aa6.54□□□□□ -1.36
CSTF1-206ENST00000493039 M0QY20 66 aa6.54□□□□□ -1.36
CSTF1-206ENST00000493039 CRYGAP11844 174 aa6.54□□□□□ -1.36
CSTF1-206ENST00000493039 PPDPFLQ8WWR9 84 aa6.54□□□□□ -1.36
CSTF1-206ENST00000493039 TRGV4A0A0C4DH28 118 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 LOC100131303A0A0U1RQF7 123 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 A0A1B0GWB2 263 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 MRPL51Q4U2R6 128 aaKnown RBP6.53□□□□□ -1.36
CSTF1-206ENST00000493039 SUMO4Q6EEV6 95 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 TMEM70Q9BUB7 260 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 PRO0255Q9UI72 69 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 TRAV10A0A0B4J240 114 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 A0A0J9YY99 117 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 TRBV6-4A0A1B0GX49 114 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 MGPP08493 103 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 C2orf91Q6ZV80 131 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 BAGE3Q86Y29 109 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 GNB1LQ9BYB4 327 aa6.53□□□□□ -1.36
CSTF1-206ENST00000493039 F5H697 171 aa6.52□□□□□ -1.37
CSTF1-206ENST00000493039 SMKR1H3BMG3 65 aa6.52□□□□□ -1.37
CSTF1-206ENST00000493039 ZNF56Q15929 161 aa6.52□□□□□ -1.37
CSTF1-206ENST00000493039 WWC2-AS2Q96NR7 200 aa6.52□□□□□ -1.37
CSTF1-206ENST00000493039 DNAH1Q9P2D7 4330 aa6.52□□□□□ -1.37
CSTF1-206ENST00000493039 NFE4Q86UQ8 179 aa6.52□□□□□ -1.37
CSTF1-206ENST00000493039 FAM240AA0A1B0GVK7 77 aa6.51□□□□□ -1.37
CSTF1-206ENST00000493039 K7EQD1 137 aa6.51□□□□□ -1.37
CSTF1-206ENST00000493039 CEMP1Q6PRD7 247 aaPredicted RBP6.51□□□□□ -1.37
CSTF1-206ENST00000493039 NRACQ8N912 160 aa6.51□□□□□ -1.37
CSTF1-206ENST00000493039 NEXN-AS1Q8NBZ9 246 aa6.51□□□□□ -1.37
CSTF1-206ENST00000493039 RPL39LQ96EH5 51 aaKnown RBP6.51□□□□□ -1.37
CSTF1-206ENST00000493039 TP73-AS1Q9UF72 201 aa6.51□□□□□ -1.37
CSTF1-206ENST00000493039 VPS13DQ5THJ4 4388 aa6.51□□□□□ -1.37
CSTF1-206ENST00000493039 VCYO14598 125 aa6.5□□□□□ -1.37
CSTF1-206ENST00000493039 PAX4O43316 350 aa6.5□□□□□ -1.37
CSTF1-206ENST00000493039 ANKRD29Q8N6D5 301 aa6.5□□□□□ -1.37
CSTF1-206ENST00000493039 MUC7Q8TAX7 377 aa6.5□□□□□ -1.37
CSTF1-206ENST00000493039 CHCHD5Q9BSY4 110 aa6.5□□□□□ -1.37
CSTF1-206ENST00000493039 D6R8Y8 96 aa6.5□□□□□ -1.37
CSTF1-206ENST00000493039 E9PLD3 99 aa6.5□□□□□ -1.37
CSTF1-206ENST00000493039 HLA-DQA1P01909 254 aa6.5□□□□□ -1.37
CSTF1-206ENST00000493039 GYPEP15421 78 aa6.5□□□□□ -1.37
CSTF1-206ENST00000493039 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
CSTF1-206ENST00000493039 RAB37Q96AX2 223 aa6.5□□□□□ -1.37
CSTF1-206ENST00000493039 A0A096LPF7 62 aa6.49□□□□□ -1.37
CSTF1-206ENST00000493039 IGLL5B9A064 214 aa6.49□□□□□ -1.37
CSTF1-206ENST00000493039 H3BNG1 76 aa6.49□□□□□ -1.37
CSTF1-206ENST00000493039 SMIM13P0DJ93 91 aa6.49□□□□□ -1.37
CSTF1-206ENST00000493039 RHOHQ15669 191 aa6.49□□□□□ -1.37
CSTF1-206ENST00000493039 MRPL18Q9H0U6 180 aaKnown RBP6.49□□□□□ -1.37
CSTF1-206ENST00000493039 TRAV13-1A0A0B4J241 112 aa6.49□□□□□ -1.37
CSTF1-206ENST00000493039 TRBV10-1A0A0K0K1A3 114 aa6.49□□□□□ -1.37
CSTF1-206ENST00000493039 EPM2AB3EWF7 344 aa6.49□□□□□ -1.37
CSTF1-206ENST00000493039 APCSP02743 223 aa6.49□□□□□ -1.37
CSTF1-206ENST00000493039 CKS2P33552 79 aa6.49□□□□□ -1.37
CSTF1-206ENST00000493039 Q6ZRU5 148 aa6.49□□□□□ -1.37
CSTF1-206ENST00000493039 NPYP01303 97 aa6.48□□□□□ -1.37
CSTF1-206ENST00000493039 TRACP01848 142 aa6.48□□□□□ -1.37
CSTF1-206ENST00000493039 COX8AP10176 69 aa6.48□□□□□ -1.37
CSTF1-206ENST00000493039 TRBV7-3A0A075B6L6 115 aa6.48□□□□□ -1.37
CSTF1-206ENST00000493039 UBE2D3P61077 147 aa6.48□□□□□ -1.37
CSTF1-206ENST00000493039 UBE2D2P62837 147 aa6.48□□□□□ -1.37
CSTF1-206ENST00000493039 BRK1Q8WUW1 75 aa6.48□□□□□ -1.37
CSTF1-206ENST00000493039 Q9H8V8 135 aa6.48□□□□□ -1.37
CSTF1-206ENST00000493039 APLNQ9ULZ1 77 aa6.48□□□□□ -1.37
CSTF1-206ENST00000493039 TRBV6-5A0A0K0K1A5 114 aa6.47□□□□□ -1.37
CSTF1-206ENST00000493039 NUPR2A6NF83 97 aa6.47□□□□□ -1.37
CSTF1-206ENST00000493039 POLR2KP53803 58 aaKnown RBP6.47□□□□□ -1.37
CSTF1-206ENST00000493039 CASC10Q5T4H9 136 aa6.47□□□□□ -1.37
CSTF1-206ENST00000493039 DAZ4Q86SG3 579 aaKnown RBP6.47□□□□□ -1.37
CSTF1-206ENST00000493039 PCP2Q8IVA1 136 aa6.47□□□□□ -1.37
CSTF1-206ENST00000493039 ORMDL3Q8N138 153 aa6.47□□□□□ -1.37
CSTF1-206ENST00000493039 DEFB104AQ8WTQ1 72 aa6.47□□□□□ -1.37
CSTF1-206ENST00000493039 DAZ3Q9NR90 486 aaKnown RBP6.47□□□□□ -1.37
CSTF1-206ENST00000493039 TEN1Q86WV5 123 aa6.46□□□□□ -1.37
CSTF1-206ENST00000493039 IGHV3-38A0A0C4DH36 116 aa6.46□□□□□ -1.38
CSTF1-206ENST00000493039 SDHAF1A6NFY7 115 aa6.46□□□□□ -1.38
CSTF1-206ENST00000493039 COX7CP15954 63 aa6.46□□□□□ -1.38
CSTF1-206ENST00000493039 SUMO2P61956 95 aaKnown RBP6.45□□□□□ -1.38
CSTF1-206ENST00000493039 RPL36AP83881 106 aaKnown RBP6.45□□□□□ -1.38
CSTF1-206ENST00000493039 ESRGQ1W209 222 aa6.45□□□□□ -1.38
CSTF1-206ENST00000493039 RPL36ALQ969Q0 106 aaKnown RBP6.45□□□□□ -1.38
CSTF1-206ENST00000493039 DSCR8Q96T75 97 aa6.45□□□□□ -1.38
CSTF1-206ENST00000493039 ICOSQ9Y6W8 199 aa6.45□□□□□ -1.38
CSTF1-206ENST00000493039 KMT2AQ03164 3969 aa6.45□□□□□ -1.38
CSTF1-206ENST00000493039 SACSQ9NZJ4 4579 aa6.45□□□□□ -1.38
CSTF1-206ENST00000493039 IGLV2-18A0A075B6J9 118 aa6.45□□□□□ -1.38
CSTF1-206ENST00000493039 TRBV7-7A0A0K0K1E9 115 aa6.45□□□□□ -1.38
CSTF1-206ENST00000493039 NTM-AS1Q6ZSK4 140 aa6.45□□□□□ -1.38
CSTF1-206ENST00000493039 C15orf53Q8NAA6 179 aa6.45□□□□□ -1.38
CSTF1-206ENST00000493039 TRBV27A0A0K0K1C4 114 aa6.44□□□□□ -1.38
CSTF1-206ENST00000493039 LYPD5Q6UWN5 251 aa6.44□□□□□ -1.38
CSTF1-206ENST00000493039 KMT2CQ8NEZ4 4911 aaKnown RBP6.44□□□□□ -1.38
CSTF1-206ENST00000493039 C3orf84H3BNL1 204 aa6.44□□□□□ -1.38
CSTF1-206ENST00000493039 SMCPP49901 116 aaPredicted RBP6.44□□□□□ -1.38
CSTF1-206ENST00000493039 RBM12B-AS1Q9P1G2 102 aa6.44□□□□□ -1.38
CSTF1-206ENST00000493039 LOC389332A0A1B0GUA5 103 aa6.43□□□□□ -1.38
CSTF1-206ENST00000493039 PPP1R17O96001 155 aa6.43□□□□□ -1.38
CSTF1-206ENST00000493039 RPL18AQ02543 176 aaKnown RBP6.43□□□□□ -1.38
CSTF1-206ENST00000493039 PRR15Q8IV56 129 aa6.43□□□□□ -1.38
CSTF1-206ENST00000493039 URB1-AS1Q96HZ7 61 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms