RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 RETNQ9HD89 108 aa9.76□□□□□ -0.85
PTPN7-216ENST00000492977 CBY1Q9Y3M2 126 aa9.76□□□□□ -0.85
PTPN7-216ENST00000492977 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
PTPN7-216ENST00000492977 C12orf74Q32Q52 190 aa9.75□□□□□ -0.85
PTPN7-216ENST00000492977 A0A096LPF7 62 aa9.74□□□□□ -0.85
PTPN7-216ENST00000492977 IGLV5-39A0A0G2JS06 123 aa9.74□□□□□ -0.85
PTPN7-216ENST00000492977 K7EP13 123 aa9.74□□□□□ -0.85
PTPN7-216ENST00000492977 HTN3P15516 51 aa9.74□□□□□ -0.85
PTPN7-216ENST00000492977 ICOSQ9Y6W8 199 aa9.74□□□□□ -0.85
PTPN7-216ENST00000492977 CMYA5Q8N3K9 4069 aa9.73□□□□□ -0.85
PTPN7-216ENST00000492977 C9orf118A6NHY6 69 aa9.73□□□□□ -0.85
PTPN7-216ENST00000492977 TMEM262E9PQX1 116 aa9.73□□□□□ -0.85
PTPN7-216ENST00000492977 ZFAND6Q6FIF0 208 aa9.73□□□□□ -0.85
PTPN7-216ENST00000492977 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
PTPN7-216ENST00000492977 COL6A5A8TX70 2615 aa9.72□□□□□ -0.85
PTPN7-216ENST00000492977 A0A0J9YXY3 114 aa9.72□□□□□ -0.85
PTPN7-216ENST00000492977 RBX1P62877 108 aa9.72□□□□□ -0.85
PTPN7-216ENST00000492977 C10orf126Q8N4M7 172 aa9.72□□□□□ -0.85
PTPN7-216ENST00000492977 CDIP1Q9H305 208 aa9.72□□□□□ -0.85
PTPN7-216ENST00000492977 NHP2Q9NX24 153 aaKnown RBP9.72□□□□□ -0.85
PTPN7-216ENST00000492977 A0A1B0GWB2 263 aa9.71□□□□□ -0.85
PTPN7-216ENST00000492977 SMIM1B2RUZ4 78 aa9.71□□□□□ -0.85
PTPN7-216ENST00000492977 TMEM238C9JI98 176 aa9.71□□□□□ -0.85
PTPN7-216ENST00000492977 H3BNG1 76 aa9.71□□□□□ -0.85
PTPN7-216ENST00000492977 IGHV3-30P01768 117 aa9.71□□□□□ -0.86
PTPN7-216ENST00000492977 IGHV3-30-5P0DP03 117 aa9.71□□□□□ -0.86
PTPN7-216ENST00000492977 VAMP3Q15836 100 aa9.71□□□□□ -0.86
PTPN7-216ENST00000492977 RAB37Q96AX2 223 aa9.71□□□□□ -0.86
PTPN7-216ENST00000492977 NDUFA1O15239 70 aa9.7□□□□□ -0.86
PTPN7-216ENST00000492977 LELP1Q5T871 98 aa9.7□□□□□ -0.86
PTPN7-216ENST00000492977 LINC00959A0A1B0GUT2 108 aa9.69□□□□□ -0.86
PTPN7-216ENST00000492977 CCL25O15444 150 aa9.69□□□□□ -0.86
PTPN7-216ENST00000492977 UBE2V1Q13404 147 aa9.69□□□□□ -0.86
PTPN7-216ENST00000492977 KPRPQ5T749 579 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-216ENST00000492977 IGKV3OR2-268A0A0C4DH90 116 aa9.68□□□□□ -0.86
PTPN7-216ENST00000492977 A0A0J9YWU9 116 aa9.68□□□□□ -0.86
PTPN7-216ENST00000492977 H3BUT2 72 aa9.68□□□□□ -0.86
PTPN7-216ENST00000492977 K7ERJ3 54 aa9.68□□□□□ -0.86
PTPN7-216ENST00000492977 TIMM17BO60830 172 aa9.68□□□□□ -0.86
PTPN7-216ENST00000492977 IGHV3OR16-9A0A0B4J2B5 98 aa9.67□□□□□ -0.86
PTPN7-216ENST00000492977 ZNF561-AS1K7EIQ3 104 aa9.67□□□□□ -0.86
PTPN7-216ENST00000492977 SS18Q15532 418 aa9.67□□□□□ -0.86
PTPN7-216ENST00000492977 SPATA25Q9BR10 227 aa9.67□□□□□ -0.86
PTPN7-216ENST00000492977 PKD1L1Q8TDX9 2849 aa9.67□□□□□ -0.86
PTPN7-216ENST00000492977 DNAH3Q8TD57 4116 aa9.67□□□□□ -0.86
PTPN7-216ENST00000492977 K7EIL1 84 aa9.67□□□□□ -0.86
PTPN7-216ENST00000492977 Q6ZTC4 211 aa9.67□□□□□ -0.86
PTPN7-216ENST00000492977 LITAFQ99732 161 aa9.67□□□□□ -0.86
PTPN7-216ENST00000492977 SPANXDQ9BXN6 97 aa9.67□□□□□ -0.86
PTPN7-216ENST00000492977 SPANXCQ9NY87 97 aa9.67□□□□□ -0.86
PTPN7-216ENST00000492977 A0A087WZ39 114 aa9.66□□□□□ -0.86
PTPN7-216ENST00000492977 RPL24P83731 157 aaKnown RBP9.66□□□□□ -0.86
PTPN7-216ENST00000492977 C11orf45Q8TAV5 145 aa9.66□□□□□ -0.86
PTPN7-216ENST00000492977 TM2D3Q9BRN9 247 aa9.66□□□□□ -0.86
PTPN7-216ENST00000492977 A0A1W2PPM0 123 aa9.65□□□□□ -0.86
PTPN7-216ENST00000492977 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.86
PTPN7-216ENST00000492977 CIRBPQ14011 172 aaKnown RBP9.65□□□□□ -0.86
PTPN7-216ENST00000492977 LYPD5Q6UWN5 251 aa9.65□□□□□ -0.86
PTPN7-216ENST00000492977 Q9H8V8 135 aa9.65□□□□□ -0.86
PTPN7-216ENST00000492977 IGLL5B9A064 214 aa9.64□□□□□ -0.87
PTPN7-216ENST00000492977 HERV-K104P63124 156 aa9.64□□□□□ -0.87
PTPN7-216ENST00000492977 MUSTN1Q8IVN3 82 aa9.64□□□□□ -0.87
PTPN7-216ENST00000492977 ZNF625Q96I27 306 aaPredicted RBP9.64□□□□□ -0.87
PTPN7-216ENST00000492977 ANGP03950 147 aaKnown RBP9.63□□□□□ -0.87
PTPN7-216ENST00000492977 FABP2P12104 132 aa9.63□□□□□ -0.87
PTPN7-216ENST00000492977 MIAQ16674 131 aa9.63□□□□□ -0.87
PTPN7-216ENST00000492977 DEFB121Q5J5C9 76 aa9.63□□□□□ -0.87
PTPN7-216ENST00000492977 ADAMTSL4-AS1Q5T5F5 129 aa9.63□□□□□ -0.87
PTPN7-216ENST00000492977 LINC01561Q8N1V8 128 aa9.63□□□□□ -0.87
PTPN7-216ENST00000492977 LINC00269Q8N2A0 174 aa9.63□□□□□ -0.87
PTPN7-216ENST00000492977 COX7B2Q8TF08 81 aa9.63□□□□□ -0.87
PTPN7-216ENST00000492977 NAA38Q9BRA0 125 aaKnown RBP9.63□□□□□ -0.87
PTPN7-216ENST00000492977 CFC1BP0CG36 223 aa9.63□□□□□ -0.87
PTPN7-216ENST00000492977 CFC1P0CG37 223 aa9.63□□□□□ -0.87
PTPN7-216ENST00000492977 IFITM1P13164 125 aa9.63□□□□□ -0.87
PTPN7-216ENST00000492977 NANOS2P60321 138 aaKnown RBP9.63□□□□□ -0.87
PTPN7-216ENST00000492977 GTF2H5Q6ZYL4 71 aa9.63□□□□□ -0.87
PTPN7-216ENST00000492977 A4D1N5 150 aa9.62□□□□□ -0.87
PTPN7-216ENST00000492977 GAGE10A6NGK3 116 aa9.62□□□□□ -0.87
PTPN7-216ENST00000492977 PRSS2P07478 247 aa9.62□□□□□ -0.87
PTPN7-216ENST00000492977 REG3AQ06141 175 aa9.62□□□□□ -0.87
PTPN7-216ENST00000492977 DEFB131BA0A096LNP1 70 aa9.61□□□□□ -0.87
PTPN7-216ENST00000492977 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.61□□□□□ -0.87
PTPN7-216ENST00000492977 APOMO95445 188 aa9.61□□□□□ -0.87
PTPN7-216ENST00000492977 XCL1P47992 114 aa9.61□□□□□ -0.87
PTPN7-216ENST00000492977 C5orf38Q86SI9 138 aa9.61□□□□□ -0.87
PTPN7-216ENST00000492977 ANK2Q01484 3957 aa9.6□□□□□ -0.87
PTPN7-216ENST00000492977 K7EP34 96 aa9.6□□□□□ -0.87
PTPN7-216ENST00000492977 SFTA2Q6UW10 78 aa9.6□□□□□ -0.87
PTPN7-216ENST00000492977 CLPSL2Q6UWE3 100 aa9.6□□□□□ -0.87
PTPN7-216ENST00000492977 CD164L2Q6UWJ8 174 aa9.6□□□□□ -0.87
PTPN7-216ENST00000492977 SVIPQ8NHG7 77 aa9.6□□□□□ -0.87
PTPN7-216ENST00000492977 A0A0B4J2C4 111 aa9.59□□□□□ -0.87
PTPN7-216ENST00000492977 Q8N3U1 123 aa9.59□□□□□ -0.87
PTPN7-216ENST00000492977 MRAPQ8TCY5 172 aa9.59□□□□□ -0.87
PTPN7-216ENST00000492977 COPS9Q8WXC6 57 aa9.59□□□□□ -0.87
PTPN7-216ENST00000492977 PRO1854Q9UHT4 67 aa9.59□□□□□ -0.87
PTPN7-216ENST00000492977 CHCHD10Q8WYQ3 142 aaPredicted RBP9.58□□□□□ -0.88
PTPN7-216ENST00000492977 PRR34Q9NV39 138 aa9.58□□□□□ -0.88
PTPN7-216ENST00000492977 TOMM7Q9P0U1 55 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms