RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
PDZRN3-210ENST00000492909 UBE2D4Q9Y2X8 147 aa9.75□□□□□ -0.85
PDZRN3-210ENST00000492909 H7C423 109 aa9.74□□□□□ -0.85
PDZRN3-210ENST00000492909 SMAGPQ0VAQ4 97 aa9.74□□□□□ -0.85
PDZRN3-210ENST00000492909 CHCHD5Q9BSY4 110 aa9.74□□□□□ -0.85
PDZRN3-210ENST00000492909 TIMM21Q9BVV7 248 aa9.74□□□□□ -0.85
PDZRN3-210ENST00000492909 CEMP1Q6PRD7 247 aaPredicted RBP9.73□□□□□ -0.85
PDZRN3-210ENST00000492909 NFE4Q86UQ8 179 aa9.73□□□□□ -0.85
PDZRN3-210ENST00000492909 DGAT2L7PQ6IED9 249 aa9.73□□□□□ -0.85
PDZRN3-210ENST00000492909 SCGB1D4Q6XE38 83 aa9.73□□□□□ -0.85
PDZRN3-210ENST00000492909 C15orf53Q8NAA6 179 aa9.73□□□□□ -0.85
PDZRN3-210ENST00000492909 IGLV4-3A0A075B6K6 122 aa9.72□□□□□ -0.85
PDZRN3-210ENST00000492909 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
PDZRN3-210ENST00000492909 CSDC2Q9Y534 153 aaKnown RBP9.72□□□□□ -0.85
PDZRN3-210ENST00000492909 TIRAPP58753 221 aa9.71□□□□□ -0.85
PDZRN3-210ENST00000492909 GAGE6Q13070 117 aa9.71□□□□□ -0.85
PDZRN3-210ENST00000492909 TMEM170BQ5T4T1 132 aa9.71□□□□□ -0.85
PDZRN3-210ENST00000492909 LELP1Q5T871 98 aa9.71□□□□□ -0.85
PDZRN3-210ENST00000492909 LYPD5Q6UWN5 251 aa9.71□□□□□ -0.85
PDZRN3-210ENST00000492909 MRPS36P82909 103 aaKnown RBP9.7□□□□□ -0.86
PDZRN3-210ENST00000492909 C21orf62-AS1Q17RA5 79 aa9.7□□□□□ -0.86
PDZRN3-210ENST00000492909 SPANXB1Q9NS25 103 aaPredicted RBP9.7□□□□□ -0.86
PDZRN3-210ENST00000492909 F8W1H4 67 aa9.7□□□□□ -0.86
PDZRN3-210ENST00000492909 UBE2D1P51668 147 aa9.7□□□□□ -0.86
PDZRN3-210ENST00000492909 TSPEAR-AS2P59090 65 aa9.7□□□□□ -0.86
PDZRN3-210ENST00000492909 SRSF9Q13242 221 aaKnown RBP eCLIP9.7□□□□□ -0.86
PDZRN3-210ENST00000492909 FAM104AQ969W3 186 aa9.7□□□□□ -0.86
PDZRN3-210ENST00000492909 TMEM101Q96IK0 257 aa9.7□□□□□ -0.86
PDZRN3-210ENST00000492909 VCX2Q9H322 139 aa9.7□□□□□ -0.86
PDZRN3-210ENST00000492909 Q6ZUT4 128 aa9.69□□□□□ -0.86
PDZRN3-210ENST00000492909 WWC2-AS2Q96NR7 200 aa9.69□□□□□ -0.86
PDZRN3-210ENST00000492909 TMEM223A0PJW6 202 aa9.68□□□□□ -0.86
PDZRN3-210ENST00000492909 TMEM262E9PQX1 116 aa9.68□□□□□ -0.86
PDZRN3-210ENST00000492909 LEPROTO15243 131 aa9.68□□□□□ -0.86
PDZRN3-210ENST00000492909 AMELXQ99217 191 aa9.68□□□□□ -0.86
PDZRN3-210ENST00000492909 J3QQQ9 107 aa9.68□□□□□ -0.86
PDZRN3-210ENST00000492909 RNASE13Q5GAN3 156 aaKnown RBP9.68□□□□□ -0.86
PDZRN3-210ENST00000492909 A0A1B0GUV1 79 aa9.67□□□□□ -0.86
PDZRN3-210ENST00000492909 LGALS3P17931 250 aaKnown RBP9.67□□□□□ -0.86
PDZRN3-210ENST00000492909 ESRGQ1W209 222 aa9.67□□□□□ -0.86
PDZRN3-210ENST00000492909 CDC42SE2Q9NRR3 84 aa9.67□□□□□ -0.86
PDZRN3-210ENST00000492909 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
PDZRN3-210ENST00000492909 DNAH7Q8WXX0 4024 aa9.67□□□□□ -0.86
PDZRN3-210ENST00000492909 IGHV3-30P01768 117 aa9.66□□□□□ -0.86
PDZRN3-210ENST00000492909 IGHV3-30-5P0DP03 117 aa9.66□□□□□ -0.86
PDZRN3-210ENST00000492909 ZNF22P17026 224 aaPredicted RBP9.66□□□□□ -0.86
PDZRN3-210ENST00000492909 IGLV4-60A0A075B6I1 120 aa9.65□□□□□ -0.86
PDZRN3-210ENST00000492909 NUPR2A6NF83 97 aa9.65□□□□□ -0.86
PDZRN3-210ENST00000492909 H3BMG7 143 aa9.65□□□□□ -0.86
PDZRN3-210ENST00000492909 RPL24P83731 157 aaKnown RBP9.65□□□□□ -0.86
PDZRN3-210ENST00000492909 WFDC2Q14508 124 aa9.65□□□□□ -0.87
PDZRN3-210ENST00000492909 PRO0461Q9UI25 63 aa9.65□□□□□ -0.87
PDZRN3-210ENST00000492909 A0A0J9YXV3 536 aa9.64□□□□□ -0.87
PDZRN3-210ENST00000492909 TSPAN13O95857 204 aa9.64□□□□□ -0.87
PDZRN3-210ENST00000492909 ZFAND6Q6FIF0 208 aa9.64□□□□□ -0.87
PDZRN3-210ENST00000492909 KLK5Q9Y337 293 aaPredicted RBP9.63□□□□□ -0.87
PDZRN3-210ENST00000492909 APOMO95445 188 aa9.63□□□□□ -0.87
PDZRN3-210ENST00000492909 CCL18P55774 89 aa9.63□□□□□ -0.87
PDZRN3-210ENST00000492909 WFDC10BQ8IUB3 73 aa9.63□□□□□ -0.87
PDZRN3-210ENST00000492909 MUC7Q8TAX7 377 aa9.63□□□□□ -0.87
PDZRN3-210ENST00000492909 CFC1BP0CG36 223 aa9.61□□□□□ -0.87
PDZRN3-210ENST00000492909 CFC1P0CG37 223 aa9.61□□□□□ -0.87
PDZRN3-210ENST00000492909 LYRM7Q5U5X0 104 aa9.61□□□□□ -0.87
PDZRN3-210ENST00000492909 Q8N3U1 123 aa9.61□□□□□ -0.87
PDZRN3-210ENST00000492909 TRAV13-1A0A0B4J241 112 aa9.6□□□□□ -0.87
PDZRN3-210ENST00000492909 ANGP03950 147 aaKnown RBP9.6□□□□□ -0.87
PDZRN3-210ENST00000492909 APLNQ9ULZ1 77 aa9.6□□□□□ -0.87
PDZRN3-210ENST00000492909 LINC00588Q9Y4M8 146 aa9.6□□□□□ -0.87
PDZRN3-210ENST00000492909 CSMD3Q7Z407 3707 aa9.6□□□□□ -0.87
PDZRN3-210ENST00000492909 IGHV3-64A0A075B6Q5 118 aa9.59□□□□□ -0.87
PDZRN3-210ENST00000492909 IGKV3OR2-268A0A0C4DH90 116 aa9.59□□□□□ -0.87
PDZRN3-210ENST00000492909 TINCRA0A1B0GVN0 87 aa9.59□□□□□ -0.87
PDZRN3-210ENST00000492909 J3QR89 54 aa9.59□□□□□ -0.87
PDZRN3-210ENST00000492909 C10orf126Q8N4M7 172 aa9.59□□□□□ -0.87
PDZRN3-210ENST00000492909 LOC107984156A0A0G2JMH3 177 aa9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 TMEM238C9JI98 176 aa9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 IGHV3-33P01772 117 aa9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 IGHV3-30-3P0DP02 117 aa9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 ETDBQ3ZM63 59 aa9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 FAM19A3Q7Z5A8 133 aa9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 ARL17AQ8IVW1 177 aa9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 LINC00269Q8N2A0 174 aa9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 GEMIN7Q9H840 131 aaKnown RBP9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 PRO1854Q9UHT4 67 aa9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 PSMB2P49721 201 aa9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 LINC00242Q5T6M2 205 aa9.58□□□□□ -0.88
PDZRN3-210ENST00000492909 STARD9Q9P2P6 4700 aa9.57□□□□□ -0.88
PDZRN3-210ENST00000492909 IGHV1-58A0A0C4DH39 117 aa9.57□□□□□ -0.88
PDZRN3-210ENST00000492909 A0A0J9YXY3 114 aa9.57□□□□□ -0.88
PDZRN3-210ENST00000492909 HERVK_113P63121 156 aa9.57□□□□□ -0.88
PDZRN3-210ENST00000492909 REG3AQ06141 175 aa9.57□□□□□ -0.88
PDZRN3-210ENST00000492909 LINC01556Q5JQF7 62 aa9.57□□□□□ -0.88
PDZRN3-210ENST00000492909 CASC10Q5T4H9 136 aa9.57□□□□□ -0.88
PDZRN3-210ENST00000492909 CLPSL2Q6UWE3 100 aa9.57□□□□□ -0.88
PDZRN3-210ENST00000492909 MTURNQ8N3F0 131 aa9.57□□□□□ -0.88
PDZRN3-210ENST00000492909 KLK12Q9UKR0 248 aa9.57□□□□□ -0.88
PDZRN3-210ENST00000492909 TRBV20-1A0A075B6N2 111 aa9.56□□□□□ -0.88
PDZRN3-210ENST00000492909 A0A0B4J2C4 111 aa9.56□□□□□ -0.88
PDZRN3-210ENST00000492909 LINC00959A0A1B0GUT2 108 aa9.56□□□□□ -0.88
PDZRN3-210ENST00000492909 A4D1N5 150 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms