RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 OR5AL1P0C617 328 aa6.09□□□□□ -1.43
HDAC3-212ENST00000492407 SERF2P84101 59 aa6.09□□□□□ -1.43
HDAC3-212ENST00000492407 C9orf153Q5TBE3 101 aa6.09□□□□□ -1.43
HDAC3-212ENST00000492407 CYB561D1Q8N8Q1 229 aa6.09□□□□□ -1.43
HDAC3-212ENST00000492407 C20orf78Q9BR46 151 aa6.09□□□□□ -1.43
HDAC3-212ENST00000492407 Q9UF83 564 aa6.09□□□□□ -1.43
HDAC3-212ENST00000492407 TRAPPC1Q9Y5R8 145 aa6.09□□□□□ -1.43
HDAC3-212ENST00000492407 TRAV8-1A0A0A6YYK1 113 aa6.08□□□□□ -1.44
HDAC3-212ENST00000492407 TRAV1-1A0A0B4J248 108 aa6.08□□□□□ -1.44
HDAC3-212ENST00000492407 A8MWV9 139 aa6.08□□□□□ -1.44
HDAC3-212ENST00000492407 APOMO95445 188 aa6.08□□□□□ -1.44
HDAC3-212ENST00000492407 SMR3BP02814 79 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-212ENST00000492407 KRTDAPP60985 99 aa6.08□□□□□ -1.44
HDAC3-212ENST00000492407 GAGE13Q4V321 117 aa6.08□□□□□ -1.44
HDAC3-212ENST00000492407 TMEM75Q8N9X5 138 aa6.08□□□□□ -1.44
HDAC3-212ENST00000492407 PRELID3AQ96N28 172 aa6.08□□□□□ -1.44
HDAC3-212ENST00000492407 TMEM167BQ9NRX6 74 aa6.08□□□□□ -1.44
HDAC3-212ENST00000492407 PYGO1Q9Y3Y4 419 aa6.08□□□□□ -1.44
HDAC3-212ENST00000492407 NDUFC2-KCTD14E9PQ53 114 aa6.07□□□□□ -1.44
HDAC3-212ENST00000492407 IGLV2-11P01706 119 aa6.07□□□□□ -1.44
HDAC3-212ENST00000492407 PLA2G1BP04054 148 aaKnown RBP6.07□□□□□ -1.44
HDAC3-212ENST00000492407 ARL14EPLP0DKL9 152 aa6.07□□□□□ -1.44
HDAC3-212ENST00000492407 PFN2P35080 140 aa6.07□□□□□ -1.44
HDAC3-212ENST00000492407 ZNF80P51504 273 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-212ENST00000492407 FOXA3P55318 350 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-212ENST00000492407 GAGE2AQ6NT46 116 aa6.07□□□□□ -1.44
HDAC3-212ENST00000492407 Q6ZSA8 131 aa6.07□□□□□ -1.44
HDAC3-212ENST00000492407 MRPL55Q7Z7F7 128 aaKnown RBP6.07□□□□□ -1.44
HDAC3-212ENST00000492407 GTSF1Q8WW33 167 aa6.07□□□□□ -1.44
HDAC3-212ENST00000492407 C11orf21Q9P2W6 132 aa6.07□□□□□ -1.44
HDAC3-212ENST00000492407 EPDR1Q9UM22 224 aa6.07□□□□□ -1.44
HDAC3-212ENST00000492407 IGHV3-30P01768 117 aa6.06□□□□□ -1.44
HDAC3-212ENST00000492407 IGHV3-33P01772 117 aa6.06□□□□□ -1.44
HDAC3-212ENST00000492407 C3orf79P0CE67 100 aa6.06□□□□□ -1.44
HDAC3-212ENST00000492407 SMIM13P0DJ93 91 aa6.06□□□□□ -1.44
HDAC3-212ENST00000492407 IGHV3-30-3P0DP02 117 aa6.06□□□□□ -1.44
HDAC3-212ENST00000492407 IGHV3-30-5P0DP03 117 aa6.06□□□□□ -1.44
HDAC3-212ENST00000492407 RNASE3P12724 160 aaKnown RBP6.06□□□□□ -1.44
HDAC3-212ENST00000492407 GCHFRP30047 84 aa6.06□□□□□ -1.44
HDAC3-212ENST00000492407 LYRM7Q5U5X0 104 aa6.06□□□□□ -1.44
HDAC3-212ENST00000492407 RMI2Q96E14 147 aa6.06□□□□□ -1.44
HDAC3-212ENST00000492407 Q9HAA7 133 aa6.06□□□□□ -1.44
HDAC3-212ENST00000492407 TRAV26-2A0A0B4J265 109 aa6.05□□□□□ -1.44
HDAC3-212ENST00000492407 NUPR1O60356 82 aa6.05□□□□□ -1.44
HDAC3-212ENST00000492407 WFDC2Q14508 124 aa6.05□□□□□ -1.44
HDAC3-212ENST00000492407 ETDBQ3ZM63 59 aa6.05□□□□□ -1.44
HDAC3-212ENST00000492407 Q6ZRU5 148 aa6.05□□□□□ -1.44
HDAC3-212ENST00000492407 COX8CQ7Z4L0 72 aa6.05□□□□□ -1.44
HDAC3-212ENST00000492407 LINC00479Q96M42 142 aa6.05□□□□□ -1.44
HDAC3-212ENST00000492407 CHCHD7Q9BUK0 85 aa6.05□□□□□ -1.44
HDAC3-212ENST00000492407 IL36BQ9NZH7 164 aa6.05□□□□□ -1.44
HDAC3-212ENST00000492407 PRO0461Q9UI25 63 aa6.05□□□□□ -1.44
HDAC3-212ENST00000492407 TRBV20-1A0A075B6N2 111 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 IGHV3-73A0A0B4J1V6 119 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
HDAC3-212ENST00000492407 H3BS24 57 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 H7C1H1 209 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 J3QL48 77 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 SERF1AO75920 110 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 S100A4P26447 101 aaKnown RBP6.04□□□□□ -1.44
HDAC3-212ENST00000492407 RPL7L1Q6DKI1 246 aaKnown RBP6.04□□□□□ -1.44
HDAC3-212ENST00000492407 PRNTQ86SH4 94 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 BAGE3Q86Y29 109 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 BAGE2Q86Y30 109 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 OR10G8Q8NGN5 311 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 DEFB104AQ8WTQ1 72 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 COPS9Q8WXC6 57 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 FAM30AQ9NZY2 134 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 DNAH8Q96JB1 4490 aa6.04□□□□□ -1.44
HDAC3-212ENST00000492407 IGKV3D-20A0A0C4DH25 116 aa6.03□□□□□ -1.44
HDAC3-212ENST00000492407 FAM236AA0A1B0GUQ0 79 aa6.03□□□□□ -1.44
HDAC3-212ENST00000492407 FAM236BA0A1B0GV22 79 aa6.03□□□□□ -1.44
HDAC3-212ENST00000492407 E9PLD3 99 aa6.03□□□□□ -1.44
HDAC3-212ENST00000492407 TRACP01848 142 aa6.03□□□□□ -1.44
HDAC3-212ENST00000492407 COX8AP10176 69 aa6.03□□□□□ -1.44
HDAC3-212ENST00000492407 LINC00310P59036 64 aa6.03□□□□□ -1.44
HDAC3-212ENST00000492407 RPL18AQ02543 176 aaKnown RBP6.03□□□□□ -1.44
HDAC3-212ENST00000492407 TMEM136Q6ZRR5 245 aa6.03□□□□□ -1.44
HDAC3-212ENST00000492407 ANKRD29Q8N6D5 301 aa6.03□□□□□ -1.44
HDAC3-212ENST00000492407 CARD19Q96LW7 228 aa6.03□□□□□ -1.44
HDAC3-212ENST00000492407 TRBV10-1A0A0K0K1A3 114 aa6.02□□□□□ -1.45
HDAC3-212ENST00000492407 TRBV7-7A0A0K0K1E9 115 aa6.02□□□□□ -1.45
HDAC3-212ENST00000492407 FGF6P10767 208 aa6.02□□□□□ -1.45
HDAC3-212ENST00000492407 FMC1Q96HJ9 113 aa6.02□□□□□ -1.45
HDAC3-212ENST00000492407 ARL2-SNX15V9GYD0 113 aa6.02□□□□□ -1.45
HDAC3-212ENST00000492407 TRBV6-1A0A0K0K1D8 114 aa6.01□□□□□ -1.45
HDAC3-212ENST00000492407 A0A1B0GWB2 263 aa6.01□□□□□ -1.45
HDAC3-212ENST00000492407 DAZ4Q86SG3 579 aaKnown RBP6.01□□□□□ -1.45
HDAC3-212ENST00000492407 TEN1Q86WV5 123 aa6.01□□□□□ -1.45
HDAC3-212ENST00000492407 LINC00528Q8N1L1 170 aa6.01□□□□□ -1.45
HDAC3-212ENST00000492407 DAZ3Q9NR90 486 aaKnown RBP6.01□□□□□ -1.45
HDAC3-212ENST00000492407 TRAV13-1A0A0B4J241 112 aa6□□□□□ -1.45
HDAC3-212ENST00000492407 CTXND1A0A1B0GTU2 59 aa6□□□□□ -1.45
HDAC3-212ENST00000492407 FAM240AA0A1B0GVK7 77 aa6□□□□□ -1.45
HDAC3-212ENST00000492407 PEX7O00628 323 aa6□□□□□ -1.45
HDAC3-212ENST00000492407 P01737 135 aa6□□□□□ -1.45
HDAC3-212ENST00000492407 ARMS2P0C7Q2 107 aa6□□□□□ -1.45
HDAC3-212ENST00000492407 COX7CP15954 63 aa6□□□□□ -1.45
HDAC3-212ENST00000492407 HAMPP81172 84 aa6□□□□□ -1.45
HDAC3-212ENST00000492407 C14orf177Q52M58 125 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms