RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 LINC00269Q8N2A0 174 aa6.55□□□□□ -1.36
USP54-214ENST00000492357 Q9H8V8 135 aa6.55□□□□□ -1.36
USP54-214ENST00000492357 TRAV13-1A0A0B4J241 112 aa6.54□□□□□ -1.36
USP54-214ENST00000492357 IGHV3OR16-9A0A0B4J2B5 98 aa6.54□□□□□ -1.36
USP54-214ENST00000492357 E9PLD3 99 aa6.54□□□□□ -1.36
USP54-214ENST00000492357 ZNF22P17026 224 aaPredicted RBP6.54□□□□□ -1.36
USP54-214ENST00000492357 A0A087WZ39 114 aa6.53□□□□□ -1.36
USP54-214ENST00000492357 TMEM223A0PJW6 202 aa6.53□□□□□ -1.36
USP54-214ENST00000492357 TMEM170BQ5T4T1 132 aa6.53□□□□□ -1.36
USP54-214ENST00000492357 LINC00469Q8N7U9 141 aa6.53□□□□□ -1.36
USP54-214ENST00000492357 PLEKHB2Q96CS7 222 aa6.53□□□□□ -1.36
USP54-214ENST00000492357 KLK12Q9UKR0 248 aa6.53□□□□□ -1.36
USP54-214ENST00000492357 IGLV5-39A0A0G2JS06 123 aa6.52□□□□□ -1.37
USP54-214ENST00000492357 DLEU1O43261 78 aa6.52□□□□□ -1.37
USP54-214ENST00000492357 APOMO95445 188 aa6.52□□□□□ -1.37
USP54-214ENST00000492357 NMUP48645 174 aa6.52□□□□□ -1.37
USP54-214ENST00000492357 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
USP54-214ENST00000492357 CASC10Q5T4H9 136 aa6.52□□□□□ -1.37
USP54-214ENST00000492357 ENHOQ6UWT2 76 aa6.52□□□□□ -1.37
USP54-214ENST00000492357 CHCHD10Q8WYQ3 142 aaPredicted RBP6.52□□□□□ -1.37
USP54-214ENST00000492357 PMCHL2Q9BQD1 86 aa6.52□□□□□ -1.37
USP54-214ENST00000492357 C1orf43Q9BWL3 253 aa6.52□□□□□ -1.37
USP54-214ENST00000492357 TM2D2Q9BX73 214 aa6.52□□□□□ -1.37
USP54-214ENST00000492357 IGHV1-58A0A0C4DH39 117 aa6.51□□□□□ -1.37
USP54-214ENST00000492357 F8WDY8 70 aa6.51□□□□□ -1.37
USP54-214ENST00000492357 TSTD3H0UI37 97 aa6.51□□□□□ -1.37
USP54-214ENST00000492357 IGHV3-30P01768 117 aa6.51□□□□□ -1.37
USP54-214ENST00000492357 IGHV3-33P01772 117 aa6.51□□□□□ -1.37
USP54-214ENST00000492357 IGHV3-30-3P0DP02 117 aa6.51□□□□□ -1.37
USP54-214ENST00000492357 IGHV3-30-5P0DP03 117 aa6.51□□□□□ -1.37
USP54-214ENST00000492357 SPATA45Q537H7 98 aa6.51□□□□□ -1.37
USP54-214ENST00000492357 UBE2WQ96B02 151 aa6.51□□□□□ -1.37
USP54-214ENST00000492357 CDKN2A-AS1Q9UH64 79 aa6.51□□□□□ -1.37
USP54-214ENST00000492357 DYNC2H1Q8NCM8 4307 aaKnown RBP6.5□□□□□ -1.37
USP54-214ENST00000492357 COX7A2LO14548 114 aa6.5□□□□□ -1.37
USP54-214ENST00000492357 LEPROTO15243 131 aa6.5□□□□□ -1.37
USP54-214ENST00000492357 EIF4EBP3O60516 100 aaPredicted RBP6.5□□□□□ -1.37
USP54-214ENST00000492357 ATOH7Q8N100 152 aa6.5□□□□□ -1.37
USP54-214ENST00000492357 NBDYA0A0U1RRE5 68 aa6.49□□□□□ -1.37
USP54-214ENST00000492357 hDV102S1A0JD36 115 aa6.49□□□□□ -1.37
USP54-214ENST00000492357 SMIM1B2RUZ4 78 aa6.49□□□□□ -1.37
USP54-214ENST00000492357 COX8AP10176 69 aa6.49□□□□□ -1.37
USP54-214ENST00000492357 CXCL5P42830 114 aa6.49□□□□□ -1.37
USP54-214ENST00000492357 ZFAND6Q6FIF0 208 aa6.49□□□□□ -1.37
USP54-214ENST00000492357 PAM16Q9Y3D7 125 aa6.49□□□□□ -1.37
USP54-214ENST00000492357 DNAH7Q8WXX0 4024 aa6.49□□□□□ -1.37
USP54-214ENST00000492357 J3QQQ9 107 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 XCL1P47992 114 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 COX6A2Q02221 97 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 FOXI1Q12951 378 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 ANKRD39Q53RE8 183 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 CFAP161Q6P656 301 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 SLC25A34Q6PIV7 304 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 BOD1L2Q8IYS8 172 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 Q8IZM0 81 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 Q8N3U1 123 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 STPG4Q8N801 248 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 UQCR10Q9UDW1 63 aa6.48□□□□□ -1.37
USP54-214ENST00000492357 IGHV3-64A0A075B6Q5 118 aa6.47□□□□□ -1.37
USP54-214ENST00000492357 IGKV3OR2-268A0A0C4DH90 116 aa6.47□□□□□ -1.37
USP54-214ENST00000492357 PCP4L1A6NKN8 68 aa6.47□□□□□ -1.37
USP54-214ENST00000492357 LINC00587B1AMM8 73 aa6.47□□□□□ -1.37
USP54-214ENST00000492357 LGALS3P17931 250 aaKnown RBP6.47□□□□□ -1.37
USP54-214ENST00000492357 MALP21145 153 aa6.47□□□□□ -1.37
USP54-214ENST00000492357 GCSHP23434 173 aa6.47□□□□□ -1.37
USP54-214ENST00000492357 HERV-K104P63124 156 aa6.47□□□□□ -1.37
USP54-214ENST00000492357 KRTAP26-1Q6PEX3 210 aa6.47□□□□□ -1.37
USP54-214ENST00000492357 LINC00476Q8WZB0 136 aa6.47□□□□□ -1.37
USP54-214ENST00000492357 MYMXA0A1B0GTQ4 84 aa6.46□□□□□ -1.38
USP54-214ENST00000492357 GAGE12HA6NDE8 117 aa6.46□□□□□ -1.38
USP54-214ENST00000492357 TGP01266 2768 aa6.46□□□□□ -1.38
USP54-214ENST00000492357 DDTP30046 118 aa6.46□□□□□ -1.38
USP54-214ENST00000492357 CLPSL2Q6UWE3 100 aa6.46□□□□□ -1.38
USP54-214ENST00000492357 MIEN1Q9BRT3 115 aa6.46□□□□□ -1.38
USP54-214ENST00000492357 PRO1933Q9H354 126 aa6.46□□□□□ -1.38
USP54-214ENST00000492357 HIGD1BQ9P298 99 aa6.46□□□□□ -1.38
USP54-214ENST00000492357 IGLV10-54A0A075B6I4 117 aa6.45□□□□□ -1.38
USP54-214ENST00000492357 IGKV2D-24A0A075B6R9 120 aa6.45□□□□□ -1.38
USP54-214ENST00000492357 NDUFA1O15239 70 aa6.45□□□□□ -1.38
USP54-214ENST00000492357 SPINK8P0C7L1 97 aa6.45□□□□□ -1.38
USP54-214ENST00000492357 MAJINQ3KP22 176 aa6.45□□□□□ -1.38
USP54-214ENST00000492357 Q6ZR54 194 aa6.45□□□□□ -1.38
USP54-214ENST00000492357 COX7B2Q8TF08 81 aa6.45□□□□□ -1.38
USP54-214ENST00000492357 C2orf48Q96LS8 159 aa6.45□□□□□ -1.38
USP54-214ENST00000492357 IGKV2D-26A0A0A0MRZ7 120 aa6.44□□□□□ -1.38
USP54-214ENST00000492357 TIMM17BO60830 172 aa6.44□□□□□ -1.38
USP54-214ENST00000492357 PRSS2P07478 247 aa6.44□□□□□ -1.38
USP54-214ENST00000492357 C14orf177Q52M58 125 aa6.44□□□□□ -1.38
USP54-214ENST00000492357 Q6ZVH6 145 aa6.44□□□□□ -1.38
USP54-214ENST00000492357 C5orf38Q86SI9 138 aa6.44□□□□□ -1.38
USP54-214ENST00000492357 PPDPFQ9H3Y8 114 aa6.44□□□□□ -1.38
USP54-214ENST00000492357 NDUFA12Q9UI09 145 aa6.44□□□□□ -1.38
USP54-214ENST00000492357 CSMD3Q7Z407 3707 aa6.43□□□□□ -1.38
USP54-214ENST00000492357 GVQW2A0A096LPI5 108 aaPredicted RBP6.43□□□□□ -1.38
USP54-214ENST00000492357 A0A0J9YXY3 114 aa6.43□□□□□ -1.38
USP54-214ENST00000492357 ZNF815PA8K554 130 aa6.43□□□□□ -1.38
USP54-214ENST00000492357 C6orf226Q5I0X4 101 aa6.43□□□□□ -1.38
USP54-214ENST00000492357 ORAOV1Q8WV07 137 aa6.43□□□□□ -1.38
USP54-214ENST00000492357 ZNF625Q96I27 306 aaPredicted RBP6.43□□□□□ -1.38
USP54-214ENST00000492357 CIRBPQ14011 172 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms