RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 IGLV1-40P01703 118 aa9.33□□□□□ -0.92
SHOX2-205ENST00000490689 COX7CP15954 63 aa9.33□□□□□ -0.92
SHOX2-205ENST00000490689 AMELXQ99217 191 aa9.33□□□□□ -0.92
SHOX2-205ENST00000490689 TIMM17BO60830 172 aa9.33□□□□□ -0.92
SHOX2-205ENST00000490689 NBL1P41271 181 aa9.33□□□□□ -0.92
SHOX2-205ENST00000490689 SMIM11BQ8TCY0 68 aa9.33□□□□□ -0.92
SHOX2-205ENST00000490689 CHCHD7Q9BUK0 85 aa9.33□□□□□ -0.92
SHOX2-205ENST00000490689 IMUPQ9GZP8 106 aa9.33□□□□□ -0.92
SHOX2-205ENST00000490689 DOPEY1Q5JWR5 2465 aa9.32□□□□□ -0.92
SHOX2-205ENST00000490689 USP17L23D6RBM5 183 aa9.32□□□□□ -0.92
SHOX2-205ENST00000490689 F5H768 121 aa9.32□□□□□ -0.92
SHOX2-205ENST00000490689 ENHOQ6UWT2 76 aa9.32□□□□□ -0.92
SHOX2-205ENST00000490689 SBSPONQ8IVN8 264 aa9.32□□□□□ -0.92
SHOX2-205ENST00000490689 Q8N2B8 174 aa9.32□□□□□ -0.92
SHOX2-205ENST00000490689 RNF152Q8N8N0 203 aa9.32□□□□□ -0.92
SHOX2-205ENST00000490689 DCHS1Q96JQ0 3298 aa9.32□□□□□ -0.92
SHOX2-205ENST00000490689 WFDC11Q8NEX6 87 aa9.32□□□□□ -0.92
SHOX2-205ENST00000490689 Q96MF0 132 aa9.32□□□□□ -0.92
SHOX2-205ENST00000490689 ATMQ13315 3056 aa9.31□□□□□ -0.92
SHOX2-205ENST00000490689 DEFB4AO15263 64 aa9.31□□□□□ -0.92
SHOX2-205ENST00000490689 ZNF575Q86XF7 245 aa9.31□□□□□ -0.92
SHOX2-205ENST00000490689 NHLRC4P0CG21 123 aaPredicted RBP9.31□□□□□ -0.92
SHOX2-205ENST00000490689 C1orf43Q9BWL3 253 aa9.31□□□□□ -0.92
SHOX2-205ENST00000490689 TRBV10-1A0A0K0K1A3 114 aa9.3□□□□□ -0.92
SHOX2-205ENST00000490689 SMIM1B2RUZ4 78 aa9.3□□□□□ -0.92
SHOX2-205ENST00000490689 FAM110AQ9BQ89 295 aa9.3□□□□□ -0.92
SHOX2-205ENST00000490689 DAD1P61803 113 aa9.3□□□□□ -0.92
SHOX2-205ENST00000490689 RPL18AQ02543 176 aaKnown RBP9.3□□□□□ -0.92
SHOX2-205ENST00000490689 CMC4P56277 68 aaPredicted RBP9.29□□□□□ -0.92
SHOX2-205ENST00000490689 AKAP13Q12802 2813 aa9.29□□□□□ -0.92
SHOX2-205ENST00000490689 SCXQ7RTU7 201 aa9.29□□□□□ -0.92
SHOX2-205ENST00000490689 COL27A1Q8IZC6 1860 aaPredicted RBP9.28□□□□□ -0.92
SHOX2-205ENST00000490689 JMJD7-PLA2G4BH0Y9G9 81 aa9.28□□□□□ -0.92
SHOX2-205ENST00000490689 CXCL5P42830 114 aa9.28□□□□□ -0.92
SHOX2-205ENST00000490689 EIF4EBP3O60516 100 aaPredicted RBP9.28□□□□□ -0.92
SHOX2-205ENST00000490689 DEFB114Q30KQ6 69 aa9.28□□□□□ -0.92
SHOX2-205ENST00000490689 A0A087WYN8 130 aa9.28□□□□□ -0.92
SHOX2-205ENST00000490689 J3QLI3 93 aa9.28□□□□□ -0.92
SHOX2-205ENST00000490689 MRAPQ8TCY5 172 aa9.28□□□□□ -0.92
SHOX2-205ENST00000490689 UPK3BQ9BT76 320 aa9.28□□□□□ -0.92
SHOX2-205ENST00000490689 CCL18P55774 89 aa9.27□□□□□ -0.92
SHOX2-205ENST00000490689 SERP2Q8N6R1 65 aa9.27□□□□□ -0.92
SHOX2-205ENST00000490689 WFDC10AQ9H1F0 79 aa9.27□□□□□ -0.92
SHOX2-205ENST00000490689 LRBAP50851 2863 aa9.27□□□□□ -0.93
SHOX2-205ENST00000490689 TMEM89A2RUT3 159 aa9.27□□□□□ -0.93
SHOX2-205ENST00000490689 C16orf74Q96GX8 76 aa9.27□□□□□ -0.93
SHOX2-205ENST00000490689 PRB2P02812 416 aaPredicted RBP9.26□□□□□ -0.93
SHOX2-205ENST00000490689 DEFB105AQ8NG35 78 aa9.26□□□□□ -0.93
SHOX2-205ENST00000490689 CITED2Q99967 270 aaPredicted RBP9.26□□□□□ -0.93
SHOX2-205ENST00000490689 PRR3P79522 188 aaKnown RBP9.26□□□□□ -0.93
SHOX2-205ENST00000490689 CDC42SE2Q9NRR3 84 aa9.26□□□□□ -0.93
SHOX2-205ENST00000490689 ZNF292O60281 2723 aa9.26□□□□□ -0.93
SHOX2-205ENST00000490689 TMEM256-PLSCR3K7ERE1 68 aa9.26□□□□□ -0.93
SHOX2-205ENST00000490689 C5orf47Q569G3 176 aa9.26□□□□□ -0.93
SHOX2-205ENST00000490689 LINC00526Q96FQ7 95 aa9.26□□□□□ -0.93
SHOX2-205ENST00000490689 ZNF561-AS1K7EIQ3 104 aa9.25□□□□□ -0.93
SHOX2-205ENST00000490689 FAM19A5Q7Z5A7 132 aaPredicted RBP9.25□□□□□ -0.93
SHOX2-205ENST00000490689 F8P00451 2351 aa9.25□□□□□ -0.93
SHOX2-205ENST00000490689 LINC00269Q8N2A0 174 aa9.25□□□□□ -0.93
SHOX2-205ENST00000490689 C6orf99Q4VX62 202 aa9.25□□□□□ -0.93
SHOX2-205ENST00000490689 FAM19A4Q96LR4 140 aa9.25□□□□□ -0.93
SHOX2-205ENST00000490689 IGHV4-28A0A0C4DH34 117 aa9.24□□□□□ -0.93
SHOX2-205ENST00000490689 IBA57-AS1B1ANH7 110 aa9.23□□□□□ -0.93
SHOX2-205ENST00000490689 TRBV7-7A0A0K0K1E9 115 aa9.23□□□□□ -0.93
SHOX2-205ENST00000490689 HRCT1Q6UXD1 115 aa9.23□□□□□ -0.93
SHOX2-205ENST00000490689 LRRC75A-AS1Q8N1F1 130 aa9.23□□□□□ -0.93
SHOX2-205ENST00000490689 LINC00846Q9NV44 126 aa9.23□□□□□ -0.93
SHOX2-205ENST00000490689 SNURFQ9Y675 71 aa9.23□□□□□ -0.93
SHOX2-205ENST00000490689 SOSTDC1Q6X4U4 206 aa9.23□□□□□ -0.93
SHOX2-205ENST00000490689 FAM218AQ96MZ4 157 aa9.23□□□□□ -0.93
SHOX2-205ENST00000490689 LINC00337Q8N6G1 96 aa9.22□□□□□ -0.93
SHOX2-205ENST00000490689 TRBV6-8A0A0A6YYG3 113 aa9.22□□□□□ -0.93
SHOX2-205ENST00000490689 ASPMQ8IZT6 3477 aa9.22□□□□□ -0.93
SHOX2-205ENST00000490689 C4orf3Q8WVX3 66 aa9.21□□□□□ -0.93
SHOX2-205ENST00000490689 ZZEF1O43149 2961 aa9.21□□□□□ -0.93
SHOX2-205ENST00000490689 LITAFQ99732 161 aa9.21□□□□□ -0.93
SHOX2-205ENST00000490689 SMIM9A6NGZ8 99 aa9.2□□□□□ -0.94
SHOX2-205ENST00000490689 IGLV4-60A0A075B6I1 120 aa9.2□□□□□ -0.94
SHOX2-205ENST00000490689 SPAG11BQ08648 103 aa9.2□□□□□ -0.94
SHOX2-205ENST00000490689 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
SHOX2-205ENST00000490689 TMEM258P61165 79 aa9.2□□□□□ -0.94
SHOX2-205ENST00000490689 FAM222AQ5U5X8 452 aa9.2□□□□□ -0.94
SHOX2-205ENST00000490689 ZNF702PQ9H963 129 aa9.2□□□□□ -0.94
SHOX2-205ENST00000490689 XAGE1AQ9HD64 81 aa9.2□□□□□ -0.94
SHOX2-205ENST00000490689 PLA2G2AP14555 144 aa9.2□□□□□ -0.94
SHOX2-205ENST00000490689 HILS1P60008 231 aa9.2□□□□□ -0.94
SHOX2-205ENST00000490689 KLK12Q9UKR0 248 aa9.2□□□□□ -0.94
SHOX2-205ENST00000490689 FAM236DA0A1B0GTK5 79 aa9.19□□□□□ -0.94
SHOX2-205ENST00000490689 FAM236CP0DP71 79 aa9.19□□□□□ -0.94
SHOX2-205ENST00000490689 ODF3L2Q3SX64 289 aa9.19□□□□□ -0.94
SHOX2-205ENST00000490689 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.19□□□□□ -0.94
SHOX2-205ENST00000490689 FAM19A1Q7Z5A9 133 aa9.18□□□□□ -0.94
SHOX2-205ENST00000490689 C9orf116Q5BN46 136 aaPredicted RBP9.18□□□□□ -0.94
SHOX2-205ENST00000490689 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
SHOX2-205ENST00000490689 Q6YL49 198 aa9.17□□□□□ -0.94
SHOX2-205ENST00000490689 DEFB135Q30KP9 77 aa9.17□□□□□ -0.94
SHOX2-205ENST00000490689 Q6JHZ5 121 aa9.17□□□□□ -0.94
SHOX2-205ENST00000490689 SMCR5Q8TEV8 140 aa9.17□□□□□ -0.94
SHOX2-205ENST00000490689 C1orf158Q8N1D5 194 aa9.16□□□□□ -0.94
SHOX2-205ENST00000490689 PKIGQ9Y2B9 76 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms