RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PLXNA1Q9UIW2 1896 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 MYOM1P52179 1685 aa1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.7□□□□□ -2.14
HMGB1P38-201ENST00000490557 MYO3AQ8NEV4 1616 aa1.69□□□□□ -2.14
HMGB1P38-201ENST00000490557 TNRC6BQ9UPQ9 1833 aaKnown RBP1.69□□□□□ -2.14
HMGB1P38-201ENST00000490557 MYMXA0A1B0GTQ4 84 aa1.69□□□□□ -2.14
HMGB1P38-201ENST00000490557 D6R8Y8 96 aa1.69□□□□□ -2.14
HMGB1P38-201ENST00000490557 MUSTN1Q8IVN3 82 aa1.69□□□□□ -2.14
HMGB1P38-201ENST00000490557 DLG5Q8TDM6 1919 aa1.69□□□□□ -2.14
HMGB1P38-201ENST00000490557 PHRF1Q9P1Y6 1649 aaKnown RBP1.69□□□□□ -2.14
HMGB1P38-201ENST00000490557 NCOA2Q15596 1464 aa1.69□□□□□ -2.14
HMGB1P38-201ENST00000490557 ABCC1P33527 1531 aa1.68□□□□□ -2.14
HMGB1P38-201ENST00000490557 NEXMIFQ5QGS0 1516 aa1.68□□□□□ -2.14
HMGB1P38-201ENST00000490557 KCPQ6ZWJ8 1503 aa1.68□□□□□ -2.14
HMGB1P38-201ENST00000490557 SMIM13P0DJ93 91 aa1.68□□□□□ -2.14
HMGB1P38-201ENST00000490557 ZNF137PP52743 207 aa1.68□□□□□ -2.14
HMGB1P38-201ENST00000490557 PLGLAQ15195 96 aa1.68□□□□□ -2.14
HMGB1P38-201ENST00000490557 C10orf99Q6UWK7 81 aa1.68□□□□□ -2.14
HMGB1P38-201ENST00000490557 CRCT1Q9UGL9 99 aa1.68□□□□□ -2.14
HMGB1P38-201ENST00000490557 ASCC3Q8N3C0 2202 aaKnown RBP1.68□□□□□ -2.14
HMGB1P38-201ENST00000490557 AFDNP55196 1824 aaKnown RBP1.68□□□□□ -2.14
HMGB1P38-201ENST00000490557 ARFGEF1Q9Y6D6 1849 aa1.68□□□□□ -2.14
HMGB1P38-201ENST00000490557 CEBPZOSA8MTT3 80 aa1.67□□□□□ -2.14
HMGB1P38-201ENST00000490557 PRB1P04280 392 aa1.67□□□□□ -2.14
HMGB1P38-201ENST00000490557 SPINT3P49223 89 aa1.67□□□□□ -2.14
HMGB1P38-201ENST00000490557 LINC00575Q6W349 94 aa1.67□□□□□ -2.14
HMGB1P38-201ENST00000490557 FDCSPQ8NFU4 85 aa1.67□□□□□ -2.14
HMGB1P38-201ENST00000490557 A0A087WVE0 104 aa1.66□□□□□ -2.14
HMGB1P38-201ENST00000490557 ARHGEF5Q12774 1597 aa1.66□□□□□ -2.14
HMGB1P38-201ENST00000490557 KIF21AQ7Z4S6 1674 aa1.65□□□□□ -2.15
HMGB1P38-201ENST00000490557 CFAP74Q9C0B2 1584 aa1.65□□□□□ -2.15
HMGB1P38-201ENST00000490557 MED13LQ71F56 2210 aa1.65□□□□□ -2.15
HMGB1P38-201ENST00000490557 SPINK13Q1W4C9 94 aa1.65□□□□□ -2.15
HMGB1P38-201ENST00000490557 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.65□□□□□ -2.15
HMGB1P38-201ENST00000490557 HEPN1Q6WQI6 88 aa1.65□□□□□ -2.15
HMGB1P38-201ENST00000490557 LINC00846Q9NV44 126 aa1.65□□□□□ -2.15
HMGB1P38-201ENST00000490557 UGGT2Q9NYU1 1516 aa1.65□□□□□ -2.15
HMGB1P38-201ENST00000490557 LRRIQ1Q96JM4 1722 aa1.64□□□□□ -2.15
HMGB1P38-201ENST00000490557 UMAD1C9J7I0 102 aa1.64□□□□□ -2.15
HMGB1P38-201ENST00000490557 S100ZQ8WXG8 99 aa1.64□□□□□ -2.15
HMGB1P38-201ENST00000490557 ZMYM4Q5VZL5 1548 aa1.64□□□□□ -2.15
HMGB1P38-201ENST00000490557 ABCA1O95477 2261 aa1.64□□□□□ -2.15
HMGB1P38-201ENST00000490557 ADAMTS12P58397 1594 aa1.64□□□□□ -2.15
HMGB1P38-201ENST00000490557 KIF20BQ96Q89 1820 aa1.63□□□□□ -2.15
HMGB1P38-201ENST00000490557 SMIM11BQ8TCY0 68 aa1.63□□□□□ -2.15
HMGB1P38-201ENST00000490557 SPRR4Q96PI1 79 aa1.63□□□□□ -2.15
HMGB1P38-201ENST00000490557 PDCD11Q14690 1871 aaKnown RBP1.63□□□□□ -2.15
HMGB1P38-201ENST00000490557 LRRC9Q6ZRR7 1453 aa1.63□□□□□ -2.15
HMGB1P38-201ENST00000490557 PTPN23Q9H3S7 1636 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 LOC285556D6RIA3 1793 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 CACNA1BQ00975 2339 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 MYH4Q9Y623 1939 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 DUOX2Q9NRD8 1548 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 E9PCH4 1651 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 A0A096LNT2 108 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 GCHFRP30047 84 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 DEFB121Q5J5C9 76 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 C6orf201Q7Z4U5 140 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 DEFB107AQ8IZN7 70 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 TMEM263Q8WUH6 116 aaKnown RBP1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 PLAC4Q8WY50 150 aa1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 SIPA1L3O60292 1781 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 NCOA6Q14686 2063 aaPredicted RBP1.62□□□□□ -2.15
HMGB1P38-201ENST00000490557 ABCA8O94911 1581 aa1.61□□□□□ -2.15
HMGB1P38-201ENST00000490557 GNGT1P63211 74 aa1.61□□□□□ -2.15
HMGB1P38-201ENST00000490557 Q6ZRX8 168 aa1.61□□□□□ -2.15
HMGB1P38-201ENST00000490557 DEFB119Q8N690 84 aa1.61□□□□□ -2.15
HMGB1P38-201ENST00000490557 MYO7BQ6PIF6 2116 aa1.61□□□□□ -2.15
HMGB1P38-201ENST00000490557 BTAF1O14981 1849 aa1.61□□□□□ -2.15
HMGB1P38-201ENST00000490557 SCN7AQ01118 1682 aa1.61□□□□□ -2.15
HMGB1P38-201ENST00000490557 CUX1P39880 1505 aa1.61□□□□□ -2.15
HMGB1P38-201ENST00000490557 H0Y9P7 68 aa1.6□□□□□ -2.15
HMGB1P38-201ENST00000490557 LY6G6CO95867 125 aa1.6□□□□□ -2.15
HMGB1P38-201ENST00000490557 ARL14EPLP0DKL9 152 aa1.6□□□□□ -2.15
HMGB1P38-201ENST00000490557 Q6JHZ5 121 aa1.6□□□□□ -2.15
HMGB1P38-201ENST00000490557 LINC00472Q9H8W2 130 aa1.6□□□□□ -2.15
HMGB1P38-201ENST00000490557 UBE2D4Q9Y2X8 147 aa1.6□□□□□ -2.15
HMGB1P38-201ENST00000490557 DNAJC13O75165 2243 aa1.6□□□□□ -2.15
HMGB1P38-201ENST00000490557 UBR1Q8IWV7 1749 aa1.6□□□□□ -2.15
HMGB1P38-201ENST00000490557 TECTAO75443 2155 aa1.59□□□□□ -2.15
HMGB1P38-201ENST00000490557 A0A087WXM4 84 aa1.59□□□□□ -2.15
HMGB1P38-201ENST00000490557 GVQW2A0A096LPI5 108 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P38-201ENST00000490557 ATP5EP2Q5VTU8 51 aa1.59□□□□□ -2.15
HMGB1P38-201ENST00000490557 Q6ZSA8 131 aa1.59□□□□□ -2.15
HMGB1P38-201ENST00000490557 PROK2Q9HC23 129 aa1.59□□□□□ -2.15
HMGB1P38-201ENST00000490557 IFT172Q9UG01 1749 aa1.59□□□□□ -2.16
HMGB1P38-201ENST00000490557 ZC3H13Q5T200 1668 aaKnown RBP1.58□□□□□ -2.16
HMGB1P38-201ENST00000490557 F5P12259 2224 aa1.58□□□□□ -2.16
HMGB1P38-201ENST00000490557 MYO7AQ13402 2215 aa1.58□□□□□ -2.16
HMGB1P38-201ENST00000490557 C10orf113Q5VZT2 155 aa1.58□□□□□ -2.16
HMGB1P38-201ENST00000490557 MAGI3Q5TCQ9 1506 aa1.57□□□□□ -2.16
HMGB1P38-201ENST00000490557 A0A1B0GUT8 65 aa1.57□□□□□ -2.16
HMGB1P38-201ENST00000490557 PIN1P1O15428 100 aa1.57□□□□□ -2.16
HMGB1P38-201ENST00000490557 RPL37P61927 97 aaKnown RBP1.57□□□□□ -2.16
HMGB1P38-201ENST00000490557 HAMPP81172 84 aa1.57□□□□□ -2.16
HMGB1P38-201ENST00000490557 SPATA8Q6RVD6 105 aa1.57□□□□□ -2.16
HMGB1P38-201ENST00000490557 RAPGEF6Q8TEU7 1601 aa1.57□□□□□ -2.16
HMGB1P38-201ENST00000490557 LAMA4Q16363 1823 aa1.56□□□□□ -2.16
HMGB1P38-201ENST00000490557 ZNF236Q9UL36 1845 aa1.56□□□□□ -2.16
HMGB1P38-201ENST00000490557 IQGAP3Q86VI3 1631 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms