RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 BAALCQ8WXS3 180 aa11.25□□□□□ -0.61
RAPGEF3-212ENST00000490387 KRTAP4-5Q9BYR2 181 aa11.25□□□□□ -0.61
RAPGEF3-212ENST00000490387 GAGE12HA6NDE8 117 aa11.24□□□□□ -0.61
RAPGEF3-212ENST00000490387 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF3-212ENST00000490387 XCL1P47992 114 aa11.24□□□□□ -0.61
RAPGEF3-212ENST00000490387 CD164L2Q6UWJ8 174 aa11.24□□□□□ -0.61
RAPGEF3-212ENST00000490387 PGPEP1Q9NXJ5 209 aa11.24□□□□□ -0.61
RAPGEF3-212ENST00000490387 ATP5LO75964 103 aa11.23□□□□□ -0.61
RAPGEF3-212ENST00000490387 FUSP35637 526 aaKnown RBP eCLIP11.23□□□□□ -0.61
RAPGEF3-212ENST00000490387 FAM19A3Q7Z5A8 133 aa11.23□□□□□ -0.61
RAPGEF3-212ENST00000490387 C2orf88Q9BSF0 95 aa11.23□□□□□ -0.61
RAPGEF3-212ENST00000490387 LINC00242Q5T6M2 205 aa11.22□□□□□ -0.61
RAPGEF3-212ENST00000490387 CDPF1Q6NVV7 123 aa11.22□□□□□ -0.61
RAPGEF3-212ENST00000490387 CST9LQ9H4G1 147 aa11.22□□□□□ -0.61
RAPGEF3-212ENST00000490387 IGHV3OR16-9A0A0B4J2B5 98 aa11.21□□□□□ -0.61
RAPGEF3-212ENST00000490387 NDUFA6P56556 154 aa11.21□□□□□ -0.61
RAPGEF3-212ENST00000490387 PMVKQ15126 192 aa11.21□□□□□ -0.61
RAPGEF3-212ENST00000490387 DNAH5Q8TE73 4624 aa11.21□□□□□ -0.62
RAPGEF3-212ENST00000490387 IFI27L1Q96BM0 104 aa11.2□□□□□ -0.62
RAPGEF3-212ENST00000490387 USP17L23D6RBM5 183 aa11.19□□□□□ -0.62
RAPGEF3-212ENST00000490387 LECT2O14960 151 aa11.19□□□□□ -0.62
RAPGEF3-212ENST00000490387 COX6A2Q02221 97 aa11.19□□□□□ -0.62
RAPGEF3-212ENST00000490387 Q8N1X5 172 aa11.19□□□□□ -0.62
RAPGEF3-212ENST00000490387 APOBP04114 4563 aaKnown RBP11.19□□□□□ -0.62
RAPGEF3-212ENST00000490387 LEPROTL1O95214 131 aa11.18□□□□□ -0.62
RAPGEF3-212ENST00000490387 C15orf56Q8N910 161 aa11.18□□□□□ -0.62
RAPGEF3-212ENST00000490387 Q8N814 137 aa11.17□□□□□ -0.62
RAPGEF3-212ENST00000490387 A0A0J9YXV3 536 aa11.16□□□□□ -0.62
RAPGEF3-212ENST00000490387 COX7A2LO14548 114 aa11.16□□□□□ -0.62
RAPGEF3-212ENST00000490387 PACRGQ96M98 296 aaPredicted RBP11.16□□□□□ -0.62
RAPGEF3-212ENST00000490387 HSPB8Q9UJY1 196 aa11.16□□□□□ -0.62
RAPGEF3-212ENST00000490387 ABCA13Q86UQ4 5058 aa11.16□□□□□ -0.62
RAPGEF3-212ENST00000490387 IGLV4-69A0A075B6H9 119 aa11.15□□□□□ -0.62
RAPGEF3-212ENST00000490387 IGLV5-45A0A087WSX0 123 aa11.15□□□□□ -0.62
RAPGEF3-212ENST00000490387 TRAV12-1A0A0B4J245 112 aa11.15□□□□□ -0.62
RAPGEF3-212ENST00000490387 TINCRA0A1B0GVN0 87 aa11.15□□□□□ -0.62
RAPGEF3-212ENST00000490387 FABP4P15090 132 aa11.15□□□□□ -0.62
RAPGEF3-212ENST00000490387 SEC11AP67812 179 aa11.15□□□□□ -0.62
RAPGEF3-212ENST00000490387 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
RAPGEF3-212ENST00000490387 A0A087WZ39 114 aa11.14□□□□□ -0.63
RAPGEF3-212ENST00000490387 PRSS1P07477 247 aa11.14□□□□□ -0.63
RAPGEF3-212ENST00000490387 IGLC3P0DOY3 106 aa11.14□□□□□ -0.63
RAPGEF3-212ENST00000490387 HERVK_113P63121 156 aa11.14□□□□□ -0.63
RAPGEF3-212ENST00000490387 C14orf177Q52M58 125 aa11.14□□□□□ -0.63
RAPGEF3-212ENST00000490387 GVQW2A0A096LPI5 108 aaPredicted RBP11.13□□□□□ -0.63
RAPGEF3-212ENST00000490387 IGHV1-58A0A0C4DH39 117 aa11.13□□□□□ -0.63
RAPGEF3-212ENST00000490387 CFAP161Q6P656 301 aa11.13□□□□□ -0.63
RAPGEF3-212ENST00000490387 GCSHP23434 173 aa11.12□□□□□ -0.63
RAPGEF3-212ENST00000490387 KRTAP10-1P60331 282 aa11.12□□□□□ -0.63
RAPGEF3-212ENST00000490387 LINC01561Q8N1V8 128 aa11.12□□□□□ -0.63
RAPGEF3-212ENST00000490387 GEMIN7Q9H840 131 aaKnown RBP11.12□□□□□ -0.63
RAPGEF3-212ENST00000490387 CDKN2A-AS1Q9UH64 79 aa11.12□□□□□ -0.63
RAPGEF3-212ENST00000490387 IGLV5-52A0A0A0MRZ9 124 aa11.11□□□□□ -0.63
RAPGEF3-212ENST00000490387 ODF1Q14990 250 aa11.11□□□□□ -0.63
RAPGEF3-212ENST00000490387 HIST3H2BBQ8N257 126 aa11.11□□□□□ -0.63
RAPGEF3-212ENST00000490387 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
RAPGEF3-212ENST00000490387 CHAC1Q9BUX1 264 aa11.11□□□□□ -0.63
RAPGEF3-212ENST00000490387 IGHV3-64A0A075B6Q5 118 aa11.1□□□□□ -0.63
RAPGEF3-212ENST00000490387 MALP21145 153 aa11.1□□□□□ -0.63
RAPGEF3-212ENST00000490387 CHTOPQ9Y3Y2 248 aaKnown RBP11.1□□□□□ -0.63
RAPGEF3-212ENST00000490387 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.09□□□□□ -0.63
RAPGEF3-212ENST00000490387 hDV102S1A0JD36 115 aa11.09□□□□□ -0.63
RAPGEF3-212ENST00000490387 C11orf86A6NJI1 115 aa11.09□□□□□ -0.63
RAPGEF3-212ENST00000490387 EPM2AB3EWF7 344 aa11.09□□□□□ -0.63
RAPGEF3-212ENST00000490387 F8VRH5 84 aa11.09□□□□□ -0.63
RAPGEF3-212ENST00000490387 APOMO95445 188 aa11.09□□□□□ -0.63
RAPGEF3-212ENST00000490387 SLPIP03973 132 aa11.09□□□□□ -0.63
RAPGEF3-212ENST00000490387 XGP55808 180 aa11.09□□□□□ -0.63
RAPGEF3-212ENST00000490387 HIGD2BQ4VC39 106 aa11.09□□□□□ -0.63
RAPGEF3-212ENST00000490387 LINC00469Q8N7U9 141 aa11.09□□□□□ -0.63
RAPGEF3-212ENST00000490387 MRPL35Q9NZE8 188 aaKnown RBP11.09□□□□□ -0.63
RAPGEF3-212ENST00000490387 S100A6P06703 90 aa11.08□□□□□ -0.64
RAPGEF3-212ENST00000490387 CNBPP62633 177 aaKnown RBP11.08□□□□□ -0.64
RAPGEF3-212ENST00000490387 OR10D4PQ8NGN7 298 aa11.08□□□□□ -0.64
RAPGEF3-212ENST00000490387 MAP1LC3CQ9BXW4 147 aa11.08□□□□□ -0.64
RAPGEF3-212ENST00000490387 C5orf52A6NGY3 159 aa11.07□□□□□ -0.64
RAPGEF3-212ENST00000490387 ZNF22P17026 224 aaPredicted RBP11.07□□□□□ -0.64
RAPGEF3-212ENST00000490387 SMIM1B2RUZ4 78 aa11.06□□□□□ -0.64
RAPGEF3-212ENST00000490387 H0Y8G0 127 aa11.06□□□□□ -0.64
RAPGEF3-212ENST00000490387 SYS1-DBNDD2H3BUS1 97 aa11.06□□□□□ -0.64
RAPGEF3-212ENST00000490387 SNRPEP62304 92 aaKnown RBP11.06□□□□□ -0.64
RAPGEF3-212ENST00000490387 KIAA0087Q14695 138 aa11.06□□□□□ -0.64
RAPGEF3-212ENST00000490387 ORAOV1Q8WV07 137 aa11.06□□□□□ -0.64
RAPGEF3-212ENST00000490387 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
RAPGEF3-212ENST00000490387 HIST1H2BLQ99880 126 aa11.06□□□□□ -0.64
RAPGEF3-212ENST00000490387 C3orf79P0CE67 100 aa11.05□□□□□ -0.64
RAPGEF3-212ENST00000490387 SPAG11BQ08648 103 aa11.05□□□□□ -0.64
RAPGEF3-212ENST00000490387 C2orf48Q96LS8 159 aa11.04□□□□□ -0.64
RAPGEF3-212ENST00000490387 IGLV5-39A0A0G2JS06 123 aa11.03□□□□□ -0.64
RAPGEF3-212ENST00000490387 H3BRM9 83 aa11.03□□□□□ -0.64
RAPGEF3-212ENST00000490387 ZNF561-AS1K7EIQ3 104 aa11.03□□□□□ -0.64
RAPGEF3-212ENST00000490387 SPINK8P0C7L1 97 aa11.03□□□□□ -0.64
RAPGEF3-212ENST00000490387 LINC01545Q5VT33 79 aa11.03□□□□□ -0.64
RAPGEF3-212ENST00000490387 PET117Q6UWS5 81 aa11.03□□□□□ -0.64
RAPGEF3-212ENST00000490387 PLNP26678 52 aa11.02□□□□□ -0.65
RAPGEF3-212ENST00000490387 S100A2P29034 98 aa11.02□□□□□ -0.65
RAPGEF3-212ENST00000490387 HAMPP81172 84 aa11.02□□□□□ -0.65
RAPGEF3-212ENST00000490387 Q5VSD8 79 aa11.02□□□□□ -0.65
RAPGEF3-212ENST00000490387 PMCHL2Q9BQD1 86 aa11.02□□□□□ -0.65
RAPGEF3-212ENST00000490387 DPM2O94777 84 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms