RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 COX7A2LO14548 114 aa13.7□□□□□ -0.22
HOXA9-205ENST00000489695 PNRC1Q12796 327 aaPredicted RBP13.7□□□□□ -0.22
HOXA9-205ENST00000489695 RNASE13Q5GAN3 156 aaKnown RBP13.7□□□□□ -0.22
HOXA9-205ENST00000489695 TRAV13-1A0A0B4J241 112 aa13.69□□□□□ -0.22
HOXA9-205ENST00000489695 SYCNQ0VAF6 134 aa13.69□□□□□ -0.22
HOXA9-205ENST00000489695 RPL39P62891 51 aaKnown RBP13.68□□□□□ -0.22
HOXA9-205ENST00000489695 ORMDL3Q8N138 153 aa13.68□□□□□ -0.22
HOXA9-205ENST00000489695 SPANXA1Q9NS26 97 aa13.68□□□□□ -0.22
HOXA9-205ENST00000489695 MUC2Q02817 5179 aa13.68□□□□□ -0.22
HOXA9-205ENST00000489695 TMEM218A2RU14 115 aa13.67□□□□□ -0.22
HOXA9-205ENST00000489695 MALP21145 153 aa13.67□□□□□ -0.22
HOXA9-205ENST00000489695 MRPS36P82909 103 aaKnown RBP13.67□□□□□ -0.22
HOXA9-205ENST00000489695 TMEM136Q6ZRR5 245 aa13.67□□□□□ -0.22
HOXA9-205ENST00000489695 IGLV4-69A0A075B6H9 119 aa13.66□□□□□ -0.22
HOXA9-205ENST00000489695 PRSS47A8MTI9 375 aa13.66□□□□□ -0.22
HOXA9-205ENST00000489695 ANAPC16Q96DE5 110 aa13.66□□□□□ -0.22
HOXA9-205ENST00000489695 PTTG1IPP53801 180 aa13.65□□□□□ -0.22
HOXA9-205ENST00000489695 C2orf48Q96LS8 159 aa13.65□□□□□ -0.22
HOXA9-205ENST00000489695 PRELID3AQ96N28 172 aa13.65□□□□□ -0.22
HOXA9-205ENST00000489695 MT-ND4LP03901 98 aa13.64□□□□□ -0.23
HOXA9-205ENST00000489695 C5orf38Q86SI9 138 aa13.64□□□□□ -0.23
HOXA9-205ENST00000489695 APOMO95445 188 aa13.63□□□□□ -0.23
HOXA9-205ENST00000489695 LAMTOR2Q9Y2Q5 125 aa13.63□□□□□ -0.23
HOXA9-205ENST00000489695 IGHV3OR16-9A0A0B4J2B5 98 aa13.62□□□□□ -0.23
HOXA9-205ENST00000489695 ADCYAP1P18509 176 aa13.62□□□□□ -0.23
HOXA9-205ENST00000489695 OPRPNQ99935 248 aaPredicted RBP13.62□□□□□ -0.23
HOXA9-205ENST00000489695 RAB5AP20339 215 aa13.61□□□□□ -0.23
HOXA9-205ENST00000489695 PYGO1Q9Y3Y4 419 aa13.61□□□□□ -0.23
HOXA9-205ENST00000489695 LOC107984640A0A0U1RRK4 108 aa13.6□□□□□ -0.23
HOXA9-205ENST00000489695 A0A1W2PNN7 141 aa13.6□□□□□ -0.23
HOXA9-205ENST00000489695 OR10D4PQ8NGN7 298 aa13.6□□□□□ -0.23
HOXA9-205ENST00000489695 CAMK2N2Q96S95 79 aa13.6□□□□□ -0.23
HOXA9-205ENST00000489695 SEC11CQ9BY50 192 aa13.6□□□□□ -0.23
HOXA9-205ENST00000489695 PSORS1C2Q9UIG4 136 aa13.6□□□□□ -0.23
HOXA9-205ENST00000489695 RNF151Q2KHN1 245 aa13.59□□□□□ -0.23
HOXA9-205ENST00000489695 GAGE2BQ13066 116 aa13.58□□□□□ -0.24
HOXA9-205ENST00000489695 IFITM10A6NMD0 228 aa13.57□□□□□ -0.24
HOXA9-205ENST00000489695 F8WDY8 70 aa13.57□□□□□ -0.24
HOXA9-205ENST00000489695 IFI27P40305 119 aaPredicted RBP13.57□□□□□ -0.24
HOXA9-205ENST00000489695 SPAG11BQ08648 103 aa13.57□□□□□ -0.24
HOXA9-205ENST00000489695 C10orf91Q5T1B1 145 aa13.57□□□□□ -0.24
HOXA9-205ENST00000489695 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.56□□□□□ -0.24
HOXA9-205ENST00000489695 MT-ND6P03923 174 aa13.56□□□□□ -0.24
HOXA9-205ENST00000489695 Q8N8P6 123 aa13.56□□□□□ -0.24
HOXA9-205ENST00000489695 IMMP2LQ96T52 175 aa13.56□□□□□ -0.24
HOXA9-205ENST00000489695 MAP1LC3AQ9H492 121 aa13.56□□□□□ -0.24
HOXA9-205ENST00000489695 CARHSP1Q9Y2V2 147 aaKnown RBP13.56□□□□□ -0.24
HOXA9-205ENST00000489695 IGLV4-3A0A075B6K6 122 aa13.55□□□□□ -0.24
HOXA9-205ENST00000489695 ATP6V1G1O75348 118 aa13.55□□□□□ -0.24
HOXA9-205ENST00000489695 LOC389332A0A1B0GUA5 103 aa13.54□□□□□ -0.24
HOXA9-205ENST00000489695 PRR26Q8N8Z3 221 aa13.54□□□□□ -0.24
HOXA9-205ENST00000489695 ORAOV1Q8WV07 137 aa13.54□□□□□ -0.24
HOXA9-205ENST00000489695 MRPL35Q9NZE8 188 aaKnown RBP13.54□□□□□ -0.24
HOXA9-205ENST00000489695 APOC3P02656 99 aa13.53□□□□□ -0.24
HOXA9-205ENST00000489695 C9orf116Q5BN46 136 aaPredicted RBP13.53□□□□□ -0.24
HOXA9-205ENST00000489695 C1orf137Q5JT78 98 aa13.53□□□□□ -0.24
HOXA9-205ENST00000489695 K7EMI3 77 aa13.52□□□□□ -0.25
HOXA9-205ENST00000489695 LINC00242Q5T6M2 205 aa13.52□□□□□ -0.25
HOXA9-205ENST00000489695 TMEM141Q96I45 108 aa13.52□□□□□ -0.25
HOXA9-205ENST00000489695 A0A087WZ39 114 aa13.51□□□□□ -0.25
HOXA9-205ENST00000489695 KRTAP9-2Q9BYQ4 174 aa13.51□□□□□ -0.25
HOXA9-205ENST00000489695 NPSP0C0P6 89 aa13.5□□□□□ -0.25
HOXA9-205ENST00000489695 ORMDL2Q53FV1 153 aa13.5□□□□□ -0.25
HOXA9-205ENST00000489695 DIRC1Q969H9 104 aa13.5□□□□□ -0.25
HOXA9-205ENST00000489695 CTDSP1Q9GZU7 261 aa13.5□□□□□ -0.25
HOXA9-205ENST00000489695 CYSLTR1Q9Y271 337 aa13.5□□□□□ -0.25
HOXA9-205ENST00000489695 TGIF2-C20orf24A0A0A6YYL0 155 aa13.49□□□□□ -0.25
HOXA9-205ENST00000489695 NDUFA1O15239 70 aa13.49□□□□□ -0.25
HOXA9-205ENST00000489695 KIAA0087Q14695 138 aa13.49□□□□□ -0.25
HOXA9-205ENST00000489695 C2orf66Q6UXQ4 117 aa13.49□□□□□ -0.25
HOXA9-205ENST00000489695 PHF5AQ7RTV0 110 aaKnown RBP13.49□□□□□ -0.25
HOXA9-205ENST00000489695 IGLV7-43P04211 117 aa13.48□□□□□ -0.25
HOXA9-205ENST00000489695 TLX1NBP0CAT3 122 aa13.48□□□□□ -0.25
HOXA9-205ENST00000489695 UBE2D1P51668 147 aa13.48□□□□□ -0.25
HOXA9-205ENST00000489695 TEX43Q6ZNM6 134 aa13.48□□□□□ -0.25
HOXA9-205ENST00000489695 LINC01561Q8N1V8 128 aa13.48□□□□□ -0.25
HOXA9-205ENST00000489695 SVBPQ8N300 66 aa13.48□□□□□ -0.25
HOXA9-205ENST00000489695 AMELXQ99217 191 aa13.48□□□□□ -0.25
HOXA9-205ENST00000489695 TRAV9-1A0A075B6T8 112 aa13.47□□□□□ -0.25
HOXA9-205ENST00000489695 IGIPA6NJ69 53 aa13.47□□□□□ -0.25
HOXA9-205ENST00000489695 S100A1P23297 94 aa13.47□□□□□ -0.25
HOXA9-205ENST00000489695 RPL18AQ02543 176 aaKnown RBP13.47□□□□□ -0.25
HOXA9-205ENST00000489695 C10orf25Q5T742 122 aa13.47□□□□□ -0.25
HOXA9-205ENST00000489695 NXT2Q9NPJ8 142 aaKnown RBP13.47□□□□□ -0.25
HOXA9-205ENST00000489695 SNAPINO95295 136 aa13.46□□□□□ -0.25
HOXA9-205ENST00000489695 UNQ6190/PRO20217Q6UXQ8 127 aa13.46□□□□□ -0.25
HOXA9-205ENST00000489695 LINC00173Q6ZV60 143 aa13.46□□□□□ -0.25
HOXA9-205ENST00000489695 C2orf88Q9BSF0 95 aa13.45□□□□□ -0.26
HOXA9-205ENST00000489695 C6orf48Q9UBA6 75 aa13.45□□□□□ -0.26
HOXA9-205ENST00000489695 H0Y9J4 135 aa13.44□□□□□ -0.26
HOXA9-205ENST00000489695 Q6ZN92 141 aa13.44□□□□□ -0.26
HOXA9-205ENST00000489695 FAM19A3Q7Z5A8 133 aa13.44□□□□□ -0.26
HOXA9-205ENST00000489695 VCX2Q9H322 139 aa13.44□□□□□ -0.26
HOXA9-205ENST00000489695 IGLV1-50A0A075B6I6 118 aa13.43□□□□□ -0.26
HOXA9-205ENST00000489695 G0S2P27469 103 aa13.43□□□□□ -0.26
HOXA9-205ENST00000489695 ZC2HC1BQ5TFG8 222 aa13.43□□□□□ -0.26
HOXA9-205ENST00000489695 RHEBQ15382 184 aa13.42□□□□□ -0.26
HOXA9-205ENST00000489695 RPS10P5Q9NQ39 176 aa13.42□□□□□ -0.26
HOXA9-205ENST00000489695 A0A0U1RQV1 116 aa13.41□□□□□ -0.26
HOXA9-205ENST00000489695 KRTAP1-4P0C5Y4 121 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms