RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 FHITP49789 147 aa8.19□□□□□ -1.1
UFD1-209ENST00000489406 RPS20P60866 119 aaKnown RBP8.19□□□□□ -1.1
UFD1-209ENST00000489406 KIAA0087Q14695 138 aa8.18□□□□□ -1.1
UFD1-209ENST00000489406 LINC00167Q96N53 147 aa8.18□□□□□ -1.1
UFD1-209ENST00000489406 TP73-AS1Q9UF72 201 aa8.18□□□□□ -1.1
UFD1-209ENST00000489406 IGHV3OR16-9A0A0B4J2B5 98 aa8.17□□□□□ -1.1
UFD1-209ENST00000489406 SCO2A0A1W2PP80 73 aa8.17□□□□□ -1.1
UFD1-209ENST00000489406 UPK1BO75841 260 aa8.17□□□□□ -1.1
UFD1-209ENST00000489406 Q6ZUT4 128 aa8.17□□□□□ -1.1
UFD1-209ENST00000489406 ZNF727A8MUV8 499 aa8.16□□□□□ -1.1
UFD1-209ENST00000489406 CCDC32Q9BV29 185 aa8.16□□□□□ -1.1
UFD1-209ENST00000489406 CSDC2Q9Y534 153 aaKnown RBP8.16□□□□□ -1.1
UFD1-209ENST00000489406 GAGE10A6NGK3 116 aa8.15□□□□□ -1.1
UFD1-209ENST00000489406 GHRHP01286 108 aa8.15□□□□□ -1.1
UFD1-209ENST00000489406 TEX261Q6UWH6 196 aa8.15□□□□□ -1.1
UFD1-209ENST00000489406 TRBV6-5A0A0K0K1A5 114 aa8.14□□□□□ -1.11
UFD1-209ENST00000489406 LOC100996750A0A140TA64 210 aa8.14□□□□□ -1.11
UFD1-209ENST00000489406 PAGE4O60829 102 aa8.14□□□□□ -1.11
UFD1-209ENST00000489406 IFNA1P01562 189 aa8.14□□□□□ -1.11
UFD1-209ENST00000489406 PRLHP81277 87 aa8.14□□□□□ -1.11
UFD1-209ENST00000489406 Q8NBF4 154 aa8.14□□□□□ -1.11
UFD1-209ENST00000489406 KRTAP4-6Q9BYQ5 205 aa8.14□□□□□ -1.11
UFD1-209ENST00000489406 ST20Q9HBF5 79 aa8.14□□□□□ -1.11
UFD1-209ENST00000489406 NEBP20929 6669 aa8.14□□□□□ -1.11
UFD1-209ENST00000489406 MAP1LC3B2A6NCE7 125 aa8.13□□□□□ -1.11
UFD1-209ENST00000489406 SPINK1P00995 79 aa8.13□□□□□ -1.11
UFD1-209ENST00000489406 KRTAP9-8Q9BYQ0 159 aa8.13□□□□□ -1.11
UFD1-209ENST00000489406 MAP1LC3BQ9GZQ8 125 aa8.13□□□□□ -1.11
UFD1-209ENST00000489406 FAM240BA0A1B0GVZ2 78 aa8.12□□□□□ -1.11
UFD1-209ENST00000489406 XKRY2A2RUG3 117 aa8.12□□□□□ -1.11
UFD1-209ENST00000489406 TMUB2Q71RG4 321 aa8.12□□□□□ -1.11
UFD1-209ENST00000489406 C9orf62Q8N4C0 152 aa8.12□□□□□ -1.11
UFD1-209ENST00000489406 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
UFD1-209ENST00000489406 SMAGPQ0VAQ4 97 aa8.11□□□□□ -1.11
UFD1-209ENST00000489406 PNRC1Q12796 327 aaPredicted RBP8.11□□□□□ -1.11
UFD1-209ENST00000489406 PLEKHB2Q96CS7 222 aa8.11□□□□□ -1.11
UFD1-209ENST00000489406 POLR2KP53803 58 aaKnown RBP8.1□□□□□ -1.11
UFD1-209ENST00000489406 RPL32P62910 135 aaKnown RBP8.1□□□□□ -1.11
UFD1-209ENST00000489406 FCER1GP30273 86 aa8.09□□□□□ -1.11
UFD1-209ENST00000489406 KRTAP20-1Q3LI63 56 aa8.09□□□□□ -1.11
UFD1-209ENST00000489406 SMIM15Q7Z3B0 74 aa8.09□□□□□ -1.11
UFD1-209ENST00000489406 Q8N377 158 aa8.09□□□□□ -1.11
UFD1-209ENST00000489406 FAM19A2Q8N3H0 131 aa8.09□□□□□ -1.11
UFD1-209ENST00000489406 CNFNQ9BYD5 112 aa8.09□□□□□ -1.11
UFD1-209ENST00000489406 TRBV27A0A0K0K1C4 114 aa8.08□□□□□ -1.12
UFD1-209ENST00000489406 RPL35P42766 123 aaKnown RBP8.08□□□□□ -1.12
UFD1-209ENST00000489406 RAB19A4D1S5 217 aa8.07□□□□□ -1.12
UFD1-209ENST00000489406 AKR1C8PQ5T2L2 129 aa8.07□□□□□ -1.12
UFD1-209ENST00000489406 PFDN1O60925 122 aa8.06□□□□□ -1.12
UFD1-209ENST00000489406 FAM19A1Q7Z5A9 133 aa8.06□□□□□ -1.12
UFD1-209ENST00000489406 IGKV2-28A0A075B6P5 120 aa8.05□□□□□ -1.12
UFD1-209ENST00000489406 TGIF2-C20orf24A0A0A6YYL0 155 aa8.05□□□□□ -1.12
UFD1-209ENST00000489406 IGKV2D-28P01615 120 aa8.05□□□□□ -1.12
UFD1-209ENST00000489406 RPL7L1Q6DKI1 246 aaKnown RBP8.05□□□□□ -1.12
UFD1-209ENST00000489406 CENPWQ5EE01 88 aa8.04□□□□□ -1.12
UFD1-209ENST00000489406 FAM104AQ969W3 186 aa8.04□□□□□ -1.12
UFD1-209ENST00000489406 TIMM21Q9BVV7 248 aa8.04□□□□□ -1.12
UFD1-209ENST00000489406 LINC00846Q9NV44 126 aa8.04□□□□□ -1.12
UFD1-209ENST00000489406 SLC25A20O43772 301 aa8.03□□□□□ -1.12
UFD1-209ENST00000489406 CBLN2Q8IUK8 224 aa8.03□□□□□ -1.12
UFD1-209ENST00000489406 IFITM10A6NMD0 228 aa8.02□□□□□ -1.13
UFD1-209ENST00000489406 VCYO14598 125 aa8.02□□□□□ -1.13
UFD1-209ENST00000489406 SSNA1O43805 119 aa8.02□□□□□ -1.13
UFD1-209ENST00000489406 A0A1B0GV50 99 aa8.01□□□□□ -1.13
UFD1-209ENST00000489406 CKS1BP61024 79 aa8.01□□□□□ -1.13
UFD1-209ENST00000489406 SPRR4Q96PI1 79 aa8.01□□□□□ -1.13
UFD1-209ENST00000489406 HIGD2AQ9BW72 106 aa8.01□□□□□ -1.13
UFD1-209ENST00000489406 MRPL18Q9H0U6 180 aaKnown RBP8.01□□□□□ -1.13
UFD1-209ENST00000489406 C9orf92A6NGG3 77 aa8□□□□□ -1.13
UFD1-209ENST00000489406 SCO1O75880 301 aa8□□□□□ -1.13
UFD1-209ENST00000489406 TOMM7Q9P0U1 55 aa8□□□□□ -1.13
UFD1-209ENST00000489406 BORCS7-ASMTA0A0B4J1R7 106 aa7.99□□□□□ -1.13
UFD1-209ENST00000489406 TMEM238C9JI98 176 aa7.99□□□□□ -1.13
UFD1-209ENST00000489406 PRSS2P07478 247 aa7.99□□□□□ -1.13
UFD1-209ENST00000489406 H2AFB1P0C5Y9 115 aa7.99□□□□□ -1.13
UFD1-209ENST00000489406 RPL39P62891 51 aaKnown RBP7.99□□□□□ -1.13
UFD1-209ENST00000489406 HBBP68871 147 aa7.99□□□□□ -1.13
UFD1-209ENST00000489406 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
UFD1-209ENST00000489406 NUDT10Q8NFP7 164 aa7.99□□□□□ -1.13
UFD1-209ENST00000489406 TMEM18Q96B42 140 aa7.99□□□□□ -1.13
UFD1-209ENST00000489406 NUDT11Q96G61 164 aa7.99□□□□□ -1.13
UFD1-209ENST00000489406 GNB1LQ9BYB4 327 aa7.99□□□□□ -1.13
UFD1-209ENST00000489406 RPS29P62273 56 aaKnown RBP7.98□□□□□ -1.13
UFD1-209ENST00000489406 TMEM126AQ9H061 195 aa7.98□□□□□ -1.13
UFD1-209ENST00000489406 IGLV5-37A0A075B6J1 123 aa7.97□□□□□ -1.13
UFD1-209ENST00000489406 C6orf226Q5I0X4 101 aa7.97□□□□□ -1.13
UFD1-209ENST00000489406 Q6Q795 121 aa7.97□□□□□ -1.13
UFD1-209ENST00000489406 ENKURQ8TC29 256 aa7.97□□□□□ -1.13
UFD1-209ENST00000489406 GNG4P50150 75 aa7.96□□□□□ -1.14
UFD1-209ENST00000489406 KCNRGQ8N5I3 272 aa7.96□□□□□ -1.14
UFD1-209ENST00000489406 SFT2D1Q8WV19 159 aa7.96□□□□□ -1.14
UFD1-209ENST00000489406 KRTAP19-6Q3LI70 58 aa7.95□□□□□ -1.14
UFD1-209ENST00000489406 SMKR1H3BMG3 65 aa7.94□□□□□ -1.14
UFD1-209ENST00000489406 MRPS36P82909 103 aaKnown RBP7.94□□□□□ -1.14
UFD1-209ENST00000489406 C11orf52Q96A22 123 aa7.93□□□□□ -1.14
UFD1-209ENST00000489406 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
UFD1-209ENST00000489406 TRBV20OR9-2A0A075B6H5 130 aa7.92□□□□□ -1.14
UFD1-209ENST00000489406 M0R378 163 aa7.92□□□□□ -1.14
UFD1-209ENST00000489406 MT2AP02795 61 aa7.92□□□□□ -1.14
UFD1-209ENST00000489406 RAB4AP20338 218 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms