RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ZNF345Q14585 488 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 SPANXN1Q5VSR9 72 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 RPL7L1Q6DKI1 246 aaKnown RBP5.34□□□□□ -1.55
SSBP1-212ENST00000489378 SUMO4Q6EEV6 95 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 NUP35Q8NFH5 326 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 PGLYRP4Q96LB8 373 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 TMEM167BQ9NRX6 74 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 ZFP30Q9Y2G7 519 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 IGLV4-69A0A075B6H9 119 aa5.33□□□□□ -1.56
SSBP1-212ENST00000489378 IGLV7-46A0A075B6I9 117 aa5.33□□□□□ -1.56
SSBP1-212ENST00000489378 A0A087X002 238 aa5.33□□□□□ -1.56
SSBP1-212ENST00000489378 A0A1W2PRE2 83 aa5.33□□□□□ -1.56
SSBP1-212ENST00000489378 F8W036 122 aa5.33□□□□□ -1.56
SSBP1-212ENST00000489378 CCL25O15444 150 aa5.33□□□□□ -1.56
SSBP1-212ENST00000489378 BCL2L11O43521 198 aa5.33□□□□□ -1.56
SSBP1-212ENST00000489378 BLOC1S1P78537 153 aa5.33□□□□□ -1.56
SSBP1-212ENST00000489378 Q75L30 129 aa5.33□□□□□ -1.56
SSBP1-212ENST00000489378 MRPL52Q86TS9 123 aaKnown RBP5.33□□□□□ -1.56
SSBP1-212ENST00000489378 TSTD3H0UI37 97 aa5.32□□□□□ -1.56
SSBP1-212ENST00000489378 PPBPP02775 128 aa5.32□□□□□ -1.56
SSBP1-212ENST00000489378 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
SSBP1-212ENST00000489378 AMMECR1LQ6DCA0 310 aa5.32□□□□□ -1.56
SSBP1-212ENST00000489378 OR5A1Q8NGJ0 315 aa5.32□□□□□ -1.56
SSBP1-212ENST00000489378 AP1S3Q96PC3 154 aa5.32□□□□□ -1.56
SSBP1-212ENST00000489378 CXorf1O96002 111 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 OR5AL1P0C617 328 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 OPRPNQ99935 248 aaPredicted RBP5.31□□□□□ -1.56
SSBP1-212ENST00000489378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.31□□□□□ -1.56
SSBP1-212ENST00000489378 LINC00959A0A1B0GUT2 108 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 IGKV2-29A2NJV5 120 aaPredicted RBP5.31□□□□□ -1.56
SSBP1-212ENST00000489378 LINC00587B1AMM8 73 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 LTAP01374 205 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 CXCL1P09341 107 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 ATP6V0CP27449 155 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 RASL11AQ6T310 242 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 FAM19A5Q7Z5A7 132 aaPredicted RBP5.31□□□□□ -1.56
SSBP1-212ENST00000489378 KRTAP7-1Q8IUC3 87 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 TYMSOSQ8TAI1 123 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 STOML3Q8TAV4 291 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 HIST1H2BAQ96A08 127 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 CAMK2N2Q96S95 79 aa5.31□□□□□ -1.56
SSBP1-212ENST00000489378 ZNF726P1Q15940 193 aa5.3□□□□□ -1.56
SSBP1-212ENST00000489378 EIF5AL1Q6IS14 154 aaKnown RBP5.3□□□□□ -1.56
SSBP1-212ENST00000489378 TSKUQ8WUA8 353 aa5.3□□□□□ -1.56
SSBP1-212ENST00000489378 FMC1Q96HJ9 113 aa5.3□□□□□ -1.56
SSBP1-212ENST00000489378 NIT2Q9NQR4 276 aa5.3□□□□□ -1.56
SSBP1-212ENST00000489378 UBE2G1P62253 170 aa5.29□□□□□ -1.56
SSBP1-212ENST00000489378 ASB16-AS1Q495Z4 193 aa5.29□□□□□ -1.56
SSBP1-212ENST00000489378 LINC01561Q8N1V8 128 aa5.29□□□□□ -1.56
SSBP1-212ENST00000489378 KANTRA0A1W2PQU2 76 aa5.28□□□□□ -1.56
SSBP1-212ENST00000489378 NTF3P20783 257 aa5.28□□□□□ -1.56
SSBP1-212ENST00000489378 S100PP25815 95 aa5.28□□□□□ -1.56
SSBP1-212ENST00000489378 UBE2BP63146 152 aa5.28□□□□□ -1.56
SSBP1-212ENST00000489378 LINC00173Q6ZV60 143 aa5.28□□□□□ -1.56
SSBP1-212ENST00000489378 PPDPFQ9H3Y8 114 aa5.28□□□□□ -1.56
SSBP1-212ENST00000489378 ZNF861PO60384 105 aa5.27□□□□□ -1.57
SSBP1-212ENST00000489378 MT1HP80294 61 aa5.27□□□□□ -1.57
SSBP1-212ENST00000489378 ALKAL2Q6UX46 152 aa5.27□□□□□ -1.57
SSBP1-212ENST00000489378 TINCRA0A1B0GVN0 87 aa5.26□□□□□ -1.57
SSBP1-212ENST00000489378 C19orf71A6NCJ1 209 aa5.26□□□□□ -1.57
SSBP1-212ENST00000489378 SS18Q15532 418 aa5.26□□□□□ -1.57
SSBP1-212ENST00000489378 KRTAP13-2Q52LG2 175 aa5.26□□□□□ -1.57
SSBP1-212ENST00000489378 TEX261Q6UWH6 196 aa5.26□□□□□ -1.57
SSBP1-212ENST00000489378 SMIM12Q96EX1 92 aa5.26□□□□□ -1.57
SSBP1-212ENST00000489378 C2orf48Q96LS8 159 aa5.26□□□□□ -1.57
SSBP1-212ENST00000489378 PSMG3Q9BT73 122 aaPredicted RBP5.26□□□□□ -1.57
SSBP1-212ENST00000489378 ANAPC11Q9NYG5 84 aa5.26□□□□□ -1.57
SSBP1-212ENST00000489378 PAM16Q9Y3D7 125 aa5.26□□□□□ -1.57
SSBP1-212ENST00000489378 H7C423 109 aa5.25□□□□□ -1.57
SSBP1-212ENST00000489378 ESDP10768 282 aa5.25□□□□□ -1.57
SSBP1-212ENST00000489378 SEC61BP60468 96 aaKnown RBP5.25□□□□□ -1.57
SSBP1-212ENST00000489378 CCL20P78556 96 aa5.25□□□□□ -1.57
SSBP1-212ENST00000489378 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
SSBP1-212ENST00000489378 BORCS7-ASMTA0A0B4J1R7 106 aa5.24□□□□□ -1.57
SSBP1-212ENST00000489378 A0A1B0GV90 55 aa5.24□□□□□ -1.57
SSBP1-212ENST00000489378 COX7A2LO14548 114 aa5.24□□□□□ -1.57
SSBP1-212ENST00000489378 TSHBP01222 138 aa5.24□□□□□ -1.57
SSBP1-212ENST00000489378 APCSP02743 223 aa5.24□□□□□ -1.57
SSBP1-212ENST00000489378 CFC1BP0CG36 223 aa5.24□□□□□ -1.57
SSBP1-212ENST00000489378 ZNF25P17030 456 aaPredicted RBP5.24□□□□□ -1.57
SSBP1-212ENST00000489378 RPL32P62910 135 aaKnown RBP5.24□□□□□ -1.57
SSBP1-212ENST00000489378 KRTAP19-2Q3LHN2 52 aa5.24□□□□□ -1.57
SSBP1-212ENST00000489378 LINC00304Q8N9R0 145 aa5.24□□□□□ -1.57
SSBP1-212ENST00000489378 C12orf57Q99622 126 aa5.24□□□□□ -1.57
SSBP1-212ENST00000489378 NKX6-2Q9C056 277 aaPredicted RBP5.24□□□□□ -1.57
SSBP1-212ENST00000489378 SSPOA2VEC9 5147 aa5.24□□□□□ -1.57
SSBP1-212ENST00000489378 NCR2O95944 276 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 IGLC6P0CF74 106 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 AKR1C3P42330 323 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 KRTAP10-6P60371 365 aaPredicted RBP5.23□□□□□ -1.57
SSBP1-212ENST00000489378 CD164Q04900 197 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 TMEM101Q96IK0 257 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 BTF3L4Q96K17 158 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 C2orf88Q9BSF0 95 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 MAP1LC3AQ9H492 121 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 SERF2P84101 59 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 SPAG11BQ08648 103 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 C10orf25Q5T742 122 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 FAM19A1Q7Z5A9 133 aa5.23□□□□□ -1.57
SSBP1-212ENST00000489378 C5orf38Q86SI9 138 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms