RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 SNRPFP62306 86 aaKnown RBP2.3□□□□□ -2.04
CCL20-204ENST00000489160 RHOHQ15669 191 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 KRTAP21-3Q3LHN1 58 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 NMSQ5H8A3 153 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 CASC2Q6XLA1 102 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 COA5Q86WW8 74 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 ARL17AQ8IVW1 177 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 C18orf32Q8TCD1 76 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 TMEM141Q96I45 108 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 LINC01600Q96MT4 127 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 AMELYQ99218 206 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 COL11A1P12107 1806 aaPredicted RBP2.3□□□□□ -2.04
CCL20-204ENST00000489160 PLXNA4Q9HCM2 1894 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 CACNA1HO95180 2353 aa2.3□□□□□ -2.04
CCL20-204ENST00000489160 HELZ2Q9BYK8 2649 aaKnown RBP2.29□□□□□ -2.04
CCL20-204ENST00000489160 TCHHQ07283 1943 aa2.29□□□□□ -2.04
CCL20-204ENST00000489160 ZNF236Q9UL36 1845 aa2.29□□□□□ -2.04
CCL20-204ENST00000489160 A6NIN4 97 aa2.29□□□□□ -2.04
CCL20-204ENST00000489160 H3BUT2 72 aa2.29□□□□□ -2.04
CCL20-204ENST00000489160 BCE1O60756 84 aa2.29□□□□□ -2.04
CCL20-204ENST00000489160 SMIM11AP58511 58 aa2.29□□□□□ -2.04
CCL20-204ENST00000489160 GNG11P61952 73 aa2.29□□□□□ -2.04
CCL20-204ENST00000489160 RBM3P98179 157 aaKnown RBP2.29□□□□□ -2.04
CCL20-204ENST00000489160 MPV17LQ2QL34 196 aa2.29□□□□□ -2.04
CCL20-204ENST00000489160 C1orf137Q5JT78 98 aa2.29□□□□□ -2.04
CCL20-204ENST00000489160 RPL7L1Q6DKI1 246 aaKnown RBP2.29□□□□□ -2.04
CCL20-204ENST00000489160 LINC00269Q8N2A0 174 aa2.29□□□□□ -2.04
CCL20-204ENST00000489160 NXT2Q9NPJ8 142 aaKnown RBP2.29□□□□□ -2.04
CCL20-204ENST00000489160 SIP14410 1827 aa2.28□□□□□ -2.04
CCL20-204ENST00000489160 EDC4Q6P2E9 1401 aaKnown RBP2.28□□□□□ -2.04
CCL20-204ENST00000489160 A0A087WSZ3 146 aa2.28□□□□□ -2.04
CCL20-204ENST00000489160 CRYM-AS1A6NIL9 109 aa2.28□□□□□ -2.04
CCL20-204ENST00000489160 UBE2G1P62253 170 aa2.28□□□□□ -2.04
CCL20-204ENST00000489160 WFDC2Q14508 124 aa2.28□□□□□ -2.04
CCL20-204ENST00000489160 SLC48A1Q6P1K1 146 aa2.28□□□□□ -2.04
CCL20-204ENST00000489160 CYP4F30PQ9H0H9 118 aa2.28□□□□□ -2.04
CCL20-204ENST00000489160 NDUFA12Q9UI09 145 aa2.28□□□□□ -2.04
CCL20-204ENST00000489160 LOC285556D6RIA3 1793 aa2.28□□□□□ -2.04
CCL20-204ENST00000489160 CFAP46Q8IYW2 2715 aa2.27□□□□□ -2.05
CCL20-204ENST00000489160 HECTD1Q9ULT8 2610 aa2.27□□□□□ -2.05
CCL20-204ENST00000489160 TANC2Q9HCD6 1990 aa2.27□□□□□ -2.05
CCL20-204ENST00000489160 MYO5AQ9Y4I1 1855 aaKnown RBP2.27□□□□□ -2.05
CCL20-204ENST00000489160 TRBV6-8A0A0A6YYG3 113 aa2.27□□□□□ -2.05
CCL20-204ENST00000489160 TRBV10-3A0A0K0K1G6 114 aa2.27□□□□□ -2.05
CCL20-204ENST00000489160 F2Z2F3 143 aa2.27□□□□□ -2.05
CCL20-204ENST00000489160 SIX6O95475 246 aa2.27□□□□□ -2.05
CCL20-204ENST00000489160 IL9P15248 144 aa2.27□□□□□ -2.05
CCL20-204ENST00000489160 KLK9Q9UKQ9 250 aa2.27□□□□□ -2.05
CCL20-204ENST00000489160 COL4A2P08572 1712 aa2.27□□□□□ -2.05
CCL20-204ENST00000489160 FREM2Q5SZK8 3169 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 IGSF10Q6WRI0 2623 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 NBPF19A0A087WUL8 3843 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 DSPP15924 2871 aaKnown RBP2.26□□□□□ -2.05
CCL20-204ENST00000489160 AKAP13Q12802 2813 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 TRAV13-2A0A0B4J235 113 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 TRBV6-5A0A0K0K1A5 114 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 SFTA3P0C7M3 94 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 C9orf116Q5BN46 136 aaPredicted RBP2.26□□□□□ -2.05
CCL20-204ENST00000489160 C10orf55Q5SWW7 151 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 S100A7L2Q5SY68 101 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 CFAP126Q5VTH2 177 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 CYP2G1PQ6ZSU1 146 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 ZNF833PQ6ZTB9 187 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 FAM19A2Q8N3H0 131 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 ORMDL1Q9P0S3 153 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 LAMA5O15230 3695 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 IGF2RP11717 2491 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 TEX15Q9BXT5 2789 aa2.26□□□□□ -2.05
CCL20-204ENST00000489160 ITPR3Q14573 2671 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 CCDC88CQ9P219 2028 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 ZFC3H1O60293 1989 aaKnown RBP2.25□□□□□ -2.05
CCL20-204ENST00000489160 TANC1Q9C0D5 1861 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 TRBV7-1A0A0A6YYK4 115 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 UMAD1C9J7I0 102 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 SMIM13P0DJ93 91 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 PSMG4Q5JS54 123 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 TMEM170BQ5T4T1 132 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 LINC00643Q86TS7 51 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 KRTAP13-1Q8IUC0 172 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 Q8TAT8 98 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 DOCK2Q92608 1830 aa2.25□□□□□ -2.05
CCL20-204ENST00000489160 RP1L1Q8IWN7 2480 aaPredicted RBP2.25□□□□□ -2.05
CCL20-204ENST00000489160 PATJQ8NI35 1801 aa2.24□□□□□ -2.05
CCL20-204ENST00000489160 TRGV2A0A075B6R0 118 aa2.24□□□□□ -2.05
CCL20-204ENST00000489160 KLKP1Q107X0 134 aa2.24□□□□□ -2.05
CCL20-204ENST00000489160 ZCCHC13Q8WW36 166 aaKnown RBP2.24□□□□□ -2.05
CCL20-204ENST00000489160 ODF3Q96PU9 254 aa2.24□□□□□ -2.05
CCL20-204ENST00000489160 LINC00474Q9P2X8 69 aa2.24□□□□□ -2.05
CCL20-204ENST00000489160 EP300Q09472 2414 aaPredicted RBP2.24□□□□□ -2.05
CCL20-204ENST00000489160 FBN2P35556 2912 aa2.24□□□□□ -2.05
CCL20-204ENST00000489160 PIEZO2Q9H5I5 2752 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 H7BZZ5 65 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 MIR22HGQ0VDD5 57 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 NDUFA11Q86Y39 141 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 FAM167A-AS1Q96KT0 104 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 DYNLRB1Q9NP97 96 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 CDC42SE1Q9NRR8 79 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 CEP295Q9C0D2 2601 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 MYO9AB2RTY4 2548 aa2.23□□□□□ -2.05
CCL20-204ENST00000489160 COL12A1Q99715 3063 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms