RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 A0A0U1RQV1 116 aa11.46□□□□□ -0.57
GGPS1-206ENST00000488594 PRR4Q16378 134 aa11.46□□□□□ -0.57
GGPS1-206ENST00000488594 C10orf25Q5T742 122 aa11.45□□□□□ -0.58
GGPS1-206ENST00000488594 SMDT1Q9H4I9 107 aa11.45□□□□□ -0.58
GGPS1-206ENST00000488594 SPANXA1Q9NS26 97 aa11.45□□□□□ -0.58
GGPS1-206ENST00000488594 C6orf48Q9UBA6 75 aa11.45□□□□□ -0.58
GGPS1-206ENST00000488594 LINC00862A6NCI5 91 aa11.44□□□□□ -0.58
GGPS1-206ENST00000488594 RPL32P62910 135 aaKnown RBP11.44□□□□□ -0.58
GGPS1-206ENST00000488594 UNQ6190/PRO20217Q6UXQ8 127 aa11.44□□□□□ -0.58
GGPS1-206ENST00000488594 TRBV24-1A0A075B6N3 115 aa11.43□□□□□ -0.58
GGPS1-206ENST00000488594 ZNF727A8MUV8 499 aa11.43□□□□□ -0.58
GGPS1-206ENST00000488594 M0QXV9 152 aa11.43□□□□□ -0.58
GGPS1-206ENST00000488594 UBE2BP63146 152 aa11.43□□□□□ -0.58
GGPS1-206ENST00000488594 HBBP68871 147 aa11.43□□□□□ -0.58
GGPS1-206ENST00000488594 MRPS36P82909 103 aaKnown RBP11.43□□□□□ -0.58
GGPS1-206ENST00000488594 MRPL51Q4U2R6 128 aaKnown RBP11.43□□□□□ -0.58
GGPS1-206ENST00000488594 GAGE2EQ4V326 116 aa11.43□□□□□ -0.58
GGPS1-206ENST00000488594 FAM104BQ5XKR9 115 aa11.43□□□□□ -0.58
GGPS1-206ENST00000488594 GAGE2DQ9UEU5 116 aa11.43□□□□□ -0.58
GGPS1-206ENST00000488594 NAT8BQ9UHF3 227 aa11.43□□□□□ -0.58
GGPS1-206ENST00000488594 V9GYV3 84 aa11.43□□□□□ -0.58
GGPS1-206ENST00000488594 RPL39P62891 51 aaKnown RBP11.42□□□□□ -0.58
GGPS1-206ENST00000488594 EIF5A2Q9GZV4 153 aaKnown RBP11.42□□□□□ -0.58
GGPS1-206ENST00000488594 MUC2Q02817 5179 aa11.42□□□□□ -0.58
GGPS1-206ENST00000488594 IFITM10A6NMD0 228 aa11.41□□□□□ -0.58
GGPS1-206ENST00000488594 FAM104AQ969W3 186 aa11.41□□□□□ -0.58
GGPS1-206ENST00000488594 CARHSP1Q9Y2V2 147 aaKnown RBP11.41□□□□□ -0.58
GGPS1-206ENST00000488594 TGIF2-C20orf24A0A0A6YYL0 155 aa11.41□□□□□ -0.58
GGPS1-206ENST00000488594 ALKAL2Q6UX46 152 aa11.41□□□□□ -0.58
GGPS1-206ENST00000488594 KRTAP7-1Q8IUC3 87 aa11.41□□□□□ -0.58
GGPS1-206ENST00000488594 TRBV30A0A0K0K1B3 111 aa11.4□□□□□ -0.59
GGPS1-206ENST00000488594 CKS2P33552 79 aa11.4□□□□□ -0.59
GGPS1-206ENST00000488594 A0A1B0GW15 77 aa11.39□□□□□ -0.59
GGPS1-206ENST00000488594 SMIM2Q9BVW6 85 aa11.39□□□□□ -0.59
GGPS1-206ENST00000488594 NDUFC2-KCTD14E9PQ53 114 aa11.38□□□□□ -0.59
GGPS1-206ENST00000488594 TNFRSF6BO95407 300 aa11.38□□□□□ -0.59
GGPS1-206ENST00000488594 KIAA0087Q14695 138 aa11.38□□□□□ -0.59
GGPS1-206ENST00000488594 FAM74A3Q4VXF1 159 aa11.37□□□□□ -0.59
GGPS1-206ENST00000488594 PACRGQ96M98 296 aaPredicted RBP11.36□□□□□ -0.59
GGPS1-206ENST00000488594 SMIM27A0A1W2PRY6 76 aa11.35□□□□□ -0.59
GGPS1-206ENST00000488594 ZNF861PO60384 105 aa11.35□□□□□ -0.59
GGPS1-206ENST00000488594 SRP19P09132 144 aaKnown RBP11.35□□□□□ -0.59
GGPS1-206ENST00000488594 IFI27P40305 119 aaPredicted RBP11.34□□□□□ -0.59
GGPS1-206ENST00000488594 C9orf129Q5T035 196 aaKnown RBP11.34□□□□□ -0.59
GGPS1-206ENST00000488594 KRTAP9-2Q9BYQ4 174 aa11.34□□□□□ -0.59
GGPS1-206ENST00000488594 D6R8Y8 96 aa11.33□□□□□ -0.6
GGPS1-206ENST00000488594 F8W036 122 aa11.33□□□□□ -0.6
GGPS1-206ENST00000488594 S100A8P05109 93 aa11.33□□□□□ -0.6
GGPS1-206ENST00000488594 LINC00242Q5T6M2 205 aa11.33□□□□□ -0.6
GGPS1-206ENST00000488594 PPBPP02775 128 aa11.32□□□□□ -0.6
GGPS1-206ENST00000488594 C2orf82Q6UX34 121 aa11.32□□□□□ -0.6
GGPS1-206ENST00000488594 PYGO1Q9Y3Y4 419 aa11.32□□□□□ -0.6
GGPS1-206ENST00000488594 NUPR1O60356 82 aa11.31□□□□□ -0.6
GGPS1-206ENST00000488594 NPYP01303 97 aa11.31□□□□□ -0.6
GGPS1-206ENST00000488594 RAB5AP20339 215 aa11.31□□□□□ -0.6
GGPS1-206ENST00000488594 RPL23P62829 140 aaKnown RBP11.31□□□□□ -0.6
GGPS1-206ENST00000488594 LINC01561Q8N1V8 128 aa11.31□□□□□ -0.6
GGPS1-206ENST00000488594 ADIRFQ15847 76 aa11.29□□□□□ -0.6
GGPS1-206ENST00000488594 TMEM141Q96I45 108 aa11.29□□□□□ -0.6
GGPS1-206ENST00000488594 IGLV4-3A0A075B6K6 122 aa11.28□□□□□ -0.6
GGPS1-206ENST00000488594 TSPAN13O95857 204 aa11.28□□□□□ -0.6
GGPS1-206ENST00000488594 LBHQ53QV2 105 aaPredicted RBP11.28□□□□□ -0.6
GGPS1-206ENST00000488594 TEX43Q6ZNM6 134 aa11.28□□□□□ -0.6
GGPS1-206ENST00000488594 NAT8Q9UHE5 227 aa11.28□□□□□ -0.6
GGPS1-206ENST00000488594 PRSS2P07478 247 aa11.27□□□□□ -0.61
GGPS1-206ENST00000488594 CKS1BP61024 79 aa11.27□□□□□ -0.61
GGPS1-206ENST00000488594 MRPL54Q6P161 138 aaKnown RBP11.27□□□□□ -0.61
GGPS1-206ENST00000488594 ORMDL3Q8N138 153 aa11.27□□□□□ -0.61
GGPS1-206ENST00000488594 C2orf88Q9BSF0 95 aa11.27□□□□□ -0.61
GGPS1-206ENST00000488594 C22orf24Q9Y442 160 aa11.27□□□□□ -0.61
GGPS1-206ENST00000488594 A0A1B0GXF2 115 aa11.26□□□□□ -0.61
GGPS1-206ENST00000488594 AKAP14Q86UN6 197 aa11.26□□□□□ -0.61
GGPS1-206ENST00000488594 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
GGPS1-206ENST00000488594 CTDSP1Q9GZU7 261 aa11.25□□□□□ -0.61
GGPS1-206ENST00000488594 CRYGAP11844 174 aa11.24□□□□□ -0.61
GGPS1-206ENST00000488594 Q6ZN92 141 aa11.24□□□□□ -0.61
GGPS1-206ENST00000488594 C6orf226Q5I0X4 101 aa11.23□□□□□ -0.61
GGPS1-206ENST00000488594 TMEM136Q6ZRR5 245 aa11.23□□□□□ -0.61
GGPS1-206ENST00000488594 Q8IZM0 81 aa11.23□□□□□ -0.61
GGPS1-206ENST00000488594 TYMSOSQ8TAI1 123 aa11.23□□□□□ -0.61
GGPS1-206ENST00000488594 PRELID3AQ96N28 172 aa11.23□□□□□ -0.61
GGPS1-206ENST00000488594 TP73-AS1Q9UF72 201 aa11.23□□□□□ -0.61
GGPS1-206ENST00000488594 A0A087X002 238 aa11.22□□□□□ -0.61
GGPS1-206ENST00000488594 BCE1O60756 84 aa11.22□□□□□ -0.61
GGPS1-206ENST00000488594 LCE2AQ5TA79 106 aaPredicted RBP11.22□□□□□ -0.61
GGPS1-206ENST00000488594 LINC00469Q8N7U9 141 aa11.22□□□□□ -0.61
GGPS1-206ENST00000488594 XAGE1AQ9HD64 81 aa11.22□□□□□ -0.61
GGPS1-206ENST00000488594 TOMM7Q9P0U1 55 aa11.22□□□□□ -0.61
GGPS1-206ENST00000488594 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.61
GGPS1-206ENST00000488594 PRSS47A8MTI9 375 aa11.2□□□□□ -0.62
GGPS1-206ENST00000488594 ATP5L2Q7Z4Y8 100 aa11.2□□□□□ -0.62
GGPS1-206ENST00000488594 ALKBH7Q9BT30 221 aaPredicted RBP11.2□□□□□ -0.62
GGPS1-206ENST00000488594 VCX2Q9H322 139 aa11.2□□□□□ -0.62
GGPS1-206ENST00000488594 CYSLTR1Q9Y271 337 aa11.2□□□□□ -0.62
GGPS1-206ENST00000488594 LAMTOR2Q9Y2Q5 125 aa11.2□□□□□ -0.62
GGPS1-206ENST00000488594 NPSP0C0P6 89 aa11.19□□□□□ -0.62
GGPS1-206ENST00000488594 AMELXQ99217 191 aa11.19□□□□□ -0.62
GGPS1-206ENST00000488594 C9JQL5 133 aa11.18□□□□□ -0.62
GGPS1-206ENST00000488594 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
GGPS1-206ENST00000488594 F8VRH5 84 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms