RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 A0A0B4J2C4 111 aa11.17□□□□□ -0.62
RAPGEF3-211ENST00000488250 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.16□□□□□ -0.62
RAPGEF3-211ENST00000488250 PRO1854Q9UHT4 67 aa11.16□□□□□ -0.62
RAPGEF3-211ENST00000488250 PAX4O43316 350 aa11.15□□□□□ -0.62
RAPGEF3-211ENST00000488250 MIAQ16674 131 aa11.15□□□□□ -0.62
RAPGEF3-211ENST00000488250 ADAMTSL4-AS1Q5T5F5 129 aa11.15□□□□□ -0.62
RAPGEF3-211ENST00000488250 IGLV4-60A0A075B6I1 120 aa11.15□□□□□ -0.62
RAPGEF3-211ENST00000488250 DAD1P61803 113 aa11.15□□□□□ -0.62
RAPGEF3-211ENST00000488250 A0A1B0GUV1 79 aa11.14□□□□□ -0.63
RAPGEF3-211ENST00000488250 COL6A5A8TX70 2615 aa11.13□□□□□ -0.63
RAPGEF3-211ENST00000488250 DEFB4AO15263 64 aa11.13□□□□□ -0.63
RAPGEF3-211ENST00000488250 EIF4EBP3O60516 100 aaPredicted RBP11.13□□□□□ -0.63
RAPGEF3-211ENST00000488250 IFITM1P13164 125 aa11.13□□□□□ -0.63
RAPGEF3-211ENST00000488250 NBEAL2Q6ZNJ1 2754 aa11.13□□□□□ -0.63
RAPGEF3-211ENST00000488250 SPART-AS1P0CW21 52 aa11.13□□□□□ -0.63
RAPGEF3-211ENST00000488250 LYRM7Q5U5X0 104 aa11.13□□□□□ -0.63
RAPGEF3-211ENST00000488250 ZNF625Q96I27 306 aaPredicted RBP11.13□□□□□ -0.63
RAPGEF3-211ENST00000488250 TRAV26-1A0A087WT03 109 aa11.12□□□□□ -0.63
RAPGEF3-211ENST00000488250 ATP5G1P05496 136 aa11.12□□□□□ -0.63
RAPGEF3-211ENST00000488250 EGFEM1PQ0D2K5 195 aa11.12□□□□□ -0.63
RAPGEF3-211ENST00000488250 OCIAD2Q56VL3 154 aa11.12□□□□□ -0.63
RAPGEF3-211ENST00000488250 PRIMA1Q86XR5 153 aa11.12□□□□□ -0.63
RAPGEF3-211ENST00000488250 Q9H8V8 135 aa11.12□□□□□ -0.63
RAPGEF3-211ENST00000488250 F8W1H4 67 aa11.11□□□□□ -0.63
RAPGEF3-211ENST00000488250 CIRBPQ14011 172 aaKnown RBP11.11□□□□□ -0.63
RAPGEF3-211ENST00000488250 SHISA2Q6UWI4 295 aa11.11□□□□□ -0.63
RAPGEF3-211ENST00000488250 CELA1Q9UNI1 258 aa11.11□□□□□ -0.63
RAPGEF3-211ENST00000488250 IGHV3OR16-9A0A0B4J2B5 98 aa11.11□□□□□ -0.63
RAPGEF3-211ENST00000488250 IGHV3-33P01772 117 aa11.11□□□□□ -0.63
RAPGEF3-211ENST00000488250 PRSS2P07478 247 aa11.11□□□□□ -0.63
RAPGEF3-211ENST00000488250 HERV-K104P63124 156 aa11.11□□□□□ -0.63
RAPGEF3-211ENST00000488250 STAB1Q9NY15 2570 aa11.1□□□□□ -0.63
RAPGEF3-211ENST00000488250 TRRAPQ9Y4A5 3859 aa11.1□□□□□ -0.63
RAPGEF3-211ENST00000488250 H3BMG7 143 aa11.1□□□□□ -0.63
RAPGEF3-211ENST00000488250 KRTAP10-11P60412 298 aa11.1□□□□□ -0.63
RAPGEF3-211ENST00000488250 OXLD1Q5BKU9 147 aa11.1□□□□□ -0.63
RAPGEF3-211ENST00000488250 TEX48A0A1B0GUV7 120 aa11.09□□□□□ -0.63
RAPGEF3-211ENST00000488250 C3orf56Q8N813 242 aa11.09□□□□□ -0.63
RAPGEF3-211ENST00000488250 RBX1P62877 108 aa11.09□□□□□ -0.63
RAPGEF3-211ENST00000488250 A0A087WZ39 114 aa11.08□□□□□ -0.64
RAPGEF3-211ENST00000488250 LINC00959A0A1B0GUT2 108 aa11.08□□□□□ -0.64
RAPGEF3-211ENST00000488250 PPDPFQ9H3Y8 114 aa11.08□□□□□ -0.64
RAPGEF3-211ENST00000488250 ERG28Q9UKR5 140 aa11.08□□□□□ -0.64
RAPGEF3-211ENST00000488250 TRBV20-1A0A075B6N2 111 aa11.07□□□□□ -0.64
RAPGEF3-211ENST00000488250 LOC107984156A0A0G2JMH3 177 aa11.07□□□□□ -0.64
RAPGEF3-211ENST00000488250 ARL17AQ8IVW1 177 aa11.07□□□□□ -0.64
RAPGEF3-211ENST00000488250 PRO0461Q9UI25 63 aa11.07□□□□□ -0.64
RAPGEF3-211ENST00000488250 K7ERU9 68 aa11.07□□□□□ -0.64
RAPGEF3-211ENST00000488250 SH2D6Q7Z4S9 175 aa11.07□□□□□ -0.64
RAPGEF3-211ENST00000488250 COPS9Q8WXC6 57 aa11.07□□□□□ -0.64
RAPGEF3-211ENST00000488250 TMEM262E9PQX1 116 aa11.06□□□□□ -0.64
RAPGEF3-211ENST00000488250 COX7B2Q8TF08 81 aa11.06□□□□□ -0.64
RAPGEF3-211ENST00000488250 ANK2Q01484 3957 aa11.06□□□□□ -0.64
RAPGEF3-211ENST00000488250 IGKV3OR2-268A0A0C4DH90 116 aa11.05□□□□□ -0.64
RAPGEF3-211ENST00000488250 MRPL23Q16540 153 aaKnown RBP11.05□□□□□ -0.64
RAPGEF3-211ENST00000488250 A0A096LPF7 62 aa11.05□□□□□ -0.64
RAPGEF3-211ENST00000488250 LINC00308Q8TCZ7 52 aa11.05□□□□□ -0.64
RAPGEF3-211ENST00000488250 SS18Q15532 418 aa11.04□□□□□ -0.64
RAPGEF3-211ENST00000488250 LINC01561Q8N1V8 128 aa11.04□□□□□ -0.64
RAPGEF3-211ENST00000488250 PSMB2P49721 201 aa11.03□□□□□ -0.64
RAPGEF3-211ENST00000488250 SFTA2Q6UW10 78 aa11.03□□□□□ -0.64
RAPGEF3-211ENST00000488250 WFDC2Q14508 124 aa11.03□□□□□ -0.64
RAPGEF3-211ENST00000488250 DAND5Q8N907 189 aa11.03□□□□□ -0.64
RAPGEF3-211ENST00000488250 ICOSQ9Y6W8 199 aa11.03□□□□□ -0.64
RAPGEF3-211ENST00000488250 TRBV30A0A0K0K1B3 111 aa11.02□□□□□ -0.65
RAPGEF3-211ENST00000488250 TCL1BO95988 128 aa11.02□□□□□ -0.65
RAPGEF3-211ENST00000488250 MEIG1Q5JSS6 88 aa11.02□□□□□ -0.65
RAPGEF3-211ENST00000488250 SCGB1C2P0DMR2 95 aa11.01□□□□□ -0.65
RAPGEF3-211ENST00000488250 NPC2P61916 151 aa11.01□□□□□ -0.65
RAPGEF3-211ENST00000488250 LELP1Q5T871 98 aa11.01□□□□□ -0.65
RAPGEF3-211ENST00000488250 C5orf38Q86SI9 138 aa11□□□□□ -0.65
RAPGEF3-211ENST00000488250 G3V4G9 280 aa10.99□□□□□ -0.65
RAPGEF3-211ENST00000488250 Q1RN00 199 aa10.99□□□□□ -0.65
RAPGEF3-211ENST00000488250 SOSTDC1Q6X4U4 206 aa10.99□□□□□ -0.65
RAPGEF3-211ENST00000488250 C11orf68Q9H3H3 251 aaKnown RBP10.99□□□□□ -0.65
RAPGEF3-211ENST00000488250 H3BNG1 76 aa10.99□□□□□ -0.65
RAPGEF3-211ENST00000488250 H7C2G1 150 aa10.99□□□□□ -0.65
RAPGEF3-211ENST00000488250 HTN3P15516 51 aa10.99□□□□□ -0.65
RAPGEF3-211ENST00000488250 XCL1P47992 114 aa10.98□□□□□ -0.65
RAPGEF3-211ENST00000488250 LINC00269Q8N2A0 174 aa10.98□□□□□ -0.65
RAPGEF3-211ENST00000488250 TOMM7Q9P0U1 55 aa10.98□□□□□ -0.65
RAPGEF3-211ENST00000488250 A0A0U1RRA0 63 aa10.97□□□□□ -0.65
RAPGEF3-211ENST00000488250 IBA57-AS1B1ANH7 110 aa10.97□□□□□ -0.65
RAPGEF3-211ENST00000488250 TRIAP1O43715 76 aa10.97□□□□□ -0.65
RAPGEF3-211ENST00000488250 SMCPP49901 116 aaPredicted RBP10.97□□□□□ -0.65
RAPGEF3-211ENST00000488250 CD164L2Q6UWJ8 174 aa10.97□□□□□ -0.65
RAPGEF3-211ENST00000488250 RETNQ9HD89 108 aa10.97□□□□□ -0.65
RAPGEF3-211ENST00000488250 CBY1Q9Y3M2 126 aa10.97□□□□□ -0.65
RAPGEF3-211ENST00000488250 Q8IZM0 81 aa10.96□□□□□ -0.65
RAPGEF3-211ENST00000488250 ANGP03950 147 aaKnown RBP10.96□□□□□ -0.66
RAPGEF3-211ENST00000488250 RPL13AP40429 203 aaKnown RBP10.96□□□□□ -0.66
RAPGEF3-211ENST00000488250 REG3AQ06141 175 aa10.96□□□□□ -0.66
RAPGEF3-211ENST00000488250 RNF151Q2KHN1 245 aa10.96□□□□□ -0.66
RAPGEF3-211ENST00000488250 ETDBQ3ZM63 59 aa10.96□□□□□ -0.66
RAPGEF3-211ENST00000488250 MTURNQ8N3F0 131 aa10.96□□□□□ -0.66
RAPGEF3-211ENST00000488250 PKD1L1Q8TDX9 2849 aa10.95□□□□□ -0.66
RAPGEF3-211ENST00000488250 CLPSL2Q6UWE3 100 aa10.95□□□□□ -0.66
RAPGEF3-211ENST00000488250 M0QXV9 152 aa10.94□□□□□ -0.66
RAPGEF3-211ENST00000488250 ATXN8Q156A1 80 aa10.94□□□□□ -0.66
RAPGEF3-211ENST00000488250 CHCHD10Q8WYQ3 142 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms