RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SERF1AO75920 110 aa7.21□□□□□ -1.26
UBE4B-210ENST00000488228 NPSP0C0P6 89 aa7.21□□□□□ -1.26
UBE4B-210ENST00000488228 UBE2D1P51668 147 aa7.21□□□□□ -1.26
UBE4B-210ENST00000488228 C5orf38Q86SI9 138 aa7.21□□□□□ -1.26
UBE4B-210ENST00000488228 CHCHD1Q96BP2 118 aaKnown RBP7.21□□□□□ -1.26
UBE4B-210ENST00000488228 VCX2Q9H322 139 aa7.21□□□□□ -1.26
UBE4B-210ENST00000488228 PGPEP1Q9NXJ5 209 aa7.21□□□□□ -1.26
UBE4B-210ENST00000488228 GVQW2A0A096LPI5 108 aaPredicted RBP7.2□□□□□ -1.26
UBE4B-210ENST00000488228 KRTAP10-1P60331 282 aa7.2□□□□□ -1.26
UBE4B-210ENST00000488228 PDZD11Q5EBL8 140 aa7.2□□□□□ -1.26
UBE4B-210ENST00000488228 LINC00242Q5T6M2 205 aa7.2□□□□□ -1.26
UBE4B-210ENST00000488228 LINC00526Q96FQ7 95 aa7.2□□□□□ -1.26
UBE4B-210ENST00000488228 IGHV3OR16-9A0A0B4J2B5 98 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 LINC01549A6NIU2 74 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HIST1H2BKO60814 126 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HSBP1O75506 76 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HIST1H2BJP06899 126 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 MALP21145 153 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 GCSHP23434 173 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HIST1H2BOP23527 126 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HIST1H2BBP33778 126 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HIST1H2BDP58876 126 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HIST1H2BCP62807 126 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 COX6A2Q02221 97 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HIST2H2BEQ16778 126 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 PAPPA-AS1Q5QFB9 102 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.19□□□□□ -1.26
UBE4B-210ENST00000488228 FAM19A2Q8N3H0 131 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HIST1H2BHQ93079 126 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HIST1H2BNQ99877 126 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HIST1H2BMQ99879 126 aa7.19□□□□□ -1.26
UBE4B-210ENST00000488228 HSPG2P98160 4391 aa7.18□□□□□ -1.26
UBE4B-210ENST00000488228 IGHV1-58A0A0C4DH39 117 aa7.18□□□□□ -1.26
UBE4B-210ENST00000488228 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-210ENST00000488228 HERC2O95714 4834 aa7.17□□□□□ -1.26
UBE4B-210ENST00000488228 A0A0J9YXV3 536 aa7.17□□□□□ -1.26
UBE4B-210ENST00000488228 NUPR1O60356 82 aa7.17□□□□□ -1.26
UBE4B-210ENST00000488228 SLPIP03973 132 aa7.17□□□□□ -1.26
UBE4B-210ENST00000488228 NDUFA6P56556 154 aa7.17□□□□□ -1.26
UBE4B-210ENST00000488228 PMVKQ15126 192 aa7.17□□□□□ -1.26
UBE4B-210ENST00000488228 CST9LQ9H4G1 147 aa7.17□□□□□ -1.26
UBE4B-210ENST00000488228 ATP5LO75964 103 aa7.16□□□□□ -1.26
UBE4B-210ENST00000488228 CNBPP62633 177 aaKnown RBP7.16□□□□□ -1.26
UBE4B-210ENST00000488228 HAMPP81172 84 aa7.16□□□□□ -1.26
UBE4B-210ENST00000488228 SPAG11BQ08648 103 aa7.16□□□□□ -1.26
UBE4B-210ENST00000488228 FAM19A3Q7Z5A8 133 aa7.16□□□□□ -1.26
UBE4B-210ENST00000488228 ORAOV1Q8WV07 137 aa7.16□□□□□ -1.26
UBE4B-210ENST00000488228 A0A087WZ39 114 aa7.15□□□□□ -1.26
UBE4B-210ENST00000488228 CHAC1Q9BUX1 264 aa7.15□□□□□ -1.26
UBE4B-210ENST00000488228 GEMIN7Q9H840 131 aaKnown RBP7.15□□□□□ -1.26
UBE4B-210ENST00000488228 CDKN2A-AS1Q9UH64 79 aa7.15□□□□□ -1.26
UBE4B-210ENST00000488228 IGLV4-69A0A075B6H9 119 aa7.14□□□□□ -1.27
UBE4B-210ENST00000488228 IGHV3-64A0A075B6Q5 118 aa7.14□□□□□ -1.27
UBE4B-210ENST00000488228 ZNF561-AS1K7EIQ3 104 aa7.14□□□□□ -1.27
UBE4B-210ENST00000488228 APOMO95445 188 aa7.14□□□□□ -1.27
UBE4B-210ENST00000488228 HERVK_113P63121 156 aa7.14□□□□□ -1.27
UBE4B-210ENST00000488228 CTAG1AP78358 180 aa7.14□□□□□ -1.27
UBE4B-210ENST00000488228 LINC00469Q8N7U9 141 aa7.14□□□□□ -1.27
UBE4B-210ENST00000488228 OR10D4PQ8NGN7 298 aa7.14□□□□□ -1.27
UBE4B-210ENST00000488228 IFI27L1Q96BM0 104 aa7.14□□□□□ -1.27
UBE4B-210ENST00000488228 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.13□□□□□ -1.27
UBE4B-210ENST00000488228 TINCRA0A1B0GVN0 87 aa7.13□□□□□ -1.27
UBE4B-210ENST00000488228 IGLC3P0DOY3 106 aa7.13□□□□□ -1.27
UBE4B-210ENST00000488228 SEC11AP67812 179 aa7.13□□□□□ -1.27
UBE4B-210ENST00000488228 C9orf163Q8N9P6 203 aa7.13□□□□□ -1.27
UBE4B-210ENST00000488228 CARD19Q96LW7 228 aa7.13□□□□□ -1.27
UBE4B-210ENST00000488228 FAM30AQ9NZY2 134 aa7.13□□□□□ -1.27
UBE4B-210ENST00000488228 IGLV5-45A0A087WSX0 123 aa7.12□□□□□ -1.27
UBE4B-210ENST00000488228 H0Y8G0 127 aa7.12□□□□□ -1.27
UBE4B-210ENST00000488228 LEPROTL1O95214 131 aa7.12□□□□□ -1.27
UBE4B-210ENST00000488228 FABP4P15090 132 aa7.12□□□□□ -1.27
UBE4B-210ENST00000488228 CAMK2N2Q96S95 79 aa7.12□□□□□ -1.27
UBE4B-210ENST00000488228 C11orf86A6NJI1 115 aa7.11□□□□□ -1.27
UBE4B-210ENST00000488228 SMIM1B2RUZ4 78 aa7.11□□□□□ -1.27
UBE4B-210ENST00000488228 CDK2AP2O75956 126 aa7.11□□□□□ -1.27
UBE4B-210ENST00000488228 SPINK8P0C7L1 97 aa7.11□□□□□ -1.27
UBE4B-210ENST00000488228 SYCNQ0VAF6 134 aa7.11□□□□□ -1.27
UBE4B-210ENST00000488228 Q6ZRU5 148 aa7.11□□□□□ -1.27
UBE4B-210ENST00000488228 PACRGQ96M98 296 aaPredicted RBP7.11□□□□□ -1.27
UBE4B-210ENST00000488228 TOMM7Q9P0U1 55 aa7.11□□□□□ -1.27
UBE4B-210ENST00000488228 PANO1I0J062 215 aa7.1□□□□□ -1.27
UBE4B-210ENST00000488228 S100A6P06703 90 aa7.1□□□□□ -1.27
UBE4B-210ENST00000488228 CHTF8P0CG12 524 aa7.1□□□□□ -1.27
UBE4B-210ENST00000488228 ZNF22P17026 224 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-210ENST00000488228 KIAA0087Q14695 138 aa7.1□□□□□ -1.27
UBE4B-210ENST00000488228 Q6ZSA8 131 aa7.1□□□□□ -1.27
UBE4B-210ENST00000488228 LINC01561Q8N1V8 128 aa7.1□□□□□ -1.27
UBE4B-210ENST00000488228 C2orf48Q96LS8 159 aa7.1□□□□□ -1.27
UBE4B-210ENST00000488228 CHTOPQ9Y3Y2 248 aaKnown RBP7.1□□□□□ -1.27
UBE4B-210ENST00000488228 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.1□□□□□ -1.27
UBE4B-210ENST00000488228 TRAV12-1A0A0B4J245 112 aa7.09□□□□□ -1.27
UBE4B-210ENST00000488228 XGP55808 180 aa7.09□□□□□ -1.27
UBE4B-210ENST00000488228 COA6Q5JTJ3 125 aaKnown RBP7.09□□□□□ -1.27
UBE4B-210ENST00000488228 C10orf25Q5T742 122 aa7.09□□□□□ -1.27
UBE4B-210ENST00000488228 C2orf82Q6UX34 121 aa7.09□□□□□ -1.27
UBE4B-210ENST00000488228 SDIM1Q6ZPB5 146 aa7.09□□□□□ -1.27
UBE4B-210ENST00000488228 MRPL35Q9NZE8 188 aaKnown RBP7.09□□□□□ -1.27
UBE4B-210ENST00000488228 HSPB8Q9UJY1 196 aa7.09□□□□□ -1.27
UBE4B-210ENST00000488228 H3BRM9 83 aa7.08□□□□□ -1.28
UBE4B-210ENST00000488228 NDUFA1O15239 70 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms