RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 ERASQ7Z444 233 aa11.1□□□□□ -0.63
SHROOM1-205ENST00000488072 TIMM17AQ99595 171 aa11.1□□□□□ -0.63
SHROOM1-205ENST00000488072 IGHV3OR16-9A0A0B4J2B5 98 aa11.09□□□□□ -0.63
SHROOM1-205ENST00000488072 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
SHROOM1-205ENST00000488072 FAM19A2Q8N3H0 131 aa11.09□□□□□ -0.63
SHROOM1-205ENST00000488072 A0A0J9YXV3 536 aa11.08□□□□□ -0.64
SHROOM1-205ENST00000488072 COX7A2LO14548 114 aa11.08□□□□□ -0.64
SHROOM1-205ENST00000488072 XGP55808 180 aa11.08□□□□□ -0.64
SHROOM1-205ENST00000488072 PDZD11Q5EBL8 140 aa11.08□□□□□ -0.64
SHROOM1-205ENST00000488072 BAGE3Q86Y29 109 aa11.08□□□□□ -0.64
SHROOM1-205ENST00000488072 GVQW2A0A096LPI5 108 aaPredicted RBP11.07□□□□□ -0.64
SHROOM1-205ENST00000488072 Q6ZN92 141 aa11.07□□□□□ -0.64
SHROOM1-205ENST00000488072 IGHV1-58A0A0C4DH39 117 aa11.06□□□□□ -0.64
SHROOM1-205ENST00000488072 PANO1I0J062 215 aa11.06□□□□□ -0.64
SHROOM1-205ENST00000488072 HBDP02042 147 aa11.06□□□□□ -0.64
SHROOM1-205ENST00000488072 MALP21145 153 aa11.06□□□□□ -0.64
SHROOM1-205ENST00000488072 SERF1AO75920 110 aa11.05□□□□□ -0.64
SHROOM1-205ENST00000488072 RAB5BP61020 215 aa11.05□□□□□ -0.64
SHROOM1-205ENST00000488072 CFAP161Q6P656 301 aa11.05□□□□□ -0.64
SHROOM1-205ENST00000488072 C2orf88Q9BSF0 95 aa11.05□□□□□ -0.64
SHROOM1-205ENST00000488072 CST9LQ9H4G1 147 aa11.05□□□□□ -0.64
SHROOM1-205ENST00000488072 IGLV4-69A0A075B6H9 119 aa11.04□□□□□ -0.64
SHROOM1-205ENST00000488072 G0S2P27469 103 aa11.04□□□□□ -0.64
SHROOM1-205ENST00000488072 NDUFA6P56556 154 aa11.04□□□□□ -0.64
SHROOM1-205ENST00000488072 C9orf163Q8N9P6 203 aa11.04□□□□□ -0.64
SHROOM1-205ENST00000488072 NPSP0C0P6 89 aa11.03□□□□□ -0.64
SHROOM1-205ENST00000488072 CNBPP62633 177 aaKnown RBP11.03□□□□□ -0.64
SHROOM1-205ENST00000488072 ORAOV1Q8WV07 137 aa11.03□□□□□ -0.64
SHROOM1-205ENST00000488072 CHCHD1Q96BP2 118 aaKnown RBP11.03□□□□□ -0.64
SHROOM1-205ENST00000488072 IGHV3-64A0A075B6Q5 118 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 HIST1H2BKO60814 126 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 HIST1H2BJP06899 126 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 CHTF8P0CG12 524 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 S100A1P23297 94 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 HIST1H2BOP23527 126 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 HIST1H2BBP33778 126 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 HIST1H2BDP58876 126 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 HIST1H2BCP62807 126 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 HIST2H2BEQ16778 126 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 HIST1H2BHQ93079 126 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 HIST1H2BNQ99877 126 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 HIST1H2BMQ99879 126 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 CDKN2A-AS1Q9UH64 79 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 FAT1Q14517 4588 aa11.02□□□□□ -0.65
SHROOM1-205ENST00000488072 A0A087WZ39 114 aa11.01□□□□□ -0.65
SHROOM1-205ENST00000488072 SPAG11BQ08648 103 aa11.01□□□□□ -0.65
SHROOM1-205ENST00000488072 PMVKQ15126 192 aa11.01□□□□□ -0.65
SHROOM1-205ENST00000488072 SDIM1Q6ZPB5 146 aa11.01□□□□□ -0.65
SHROOM1-205ENST00000488072 FAM19A3Q7Z5A8 133 aa11.01□□□□□ -0.65
SHROOM1-205ENST00000488072 KRTAP4-5Q9BYR2 181 aa11.01□□□□□ -0.65
SHROOM1-205ENST00000488072 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.01□□□□□ -0.65
SHROOM1-205ENST00000488072 ZNF561-AS1K7EIQ3 104 aa11□□□□□ -0.65
SHROOM1-205ENST00000488072 HSBP1O75506 76 aa11□□□□□ -0.65
SHROOM1-205ENST00000488072 CDK2AP2O75956 126 aa11□□□□□ -0.65
SHROOM1-205ENST00000488072 SMR3BP02814 79 aaPredicted RBP11□□□□□ -0.65
SHROOM1-205ENST00000488072 C10orf25Q5T742 122 aa11□□□□□ -0.65
SHROOM1-205ENST00000488072 Q6ZRU5 148 aa11□□□□□ -0.65
SHROOM1-205ENST00000488072 KIAA0087Q14695 138 aa10.99□□□□□ -0.65
SHROOM1-205ENST00000488072 PAPPA-AS1Q5QFB9 102 aa10.99□□□□□ -0.65
SHROOM1-205ENST00000488072 Q6ZSA8 131 aa10.99□□□□□ -0.65
SHROOM1-205ENST00000488072 SYCNQ0VAF6 134 aa10.98□□□□□ -0.65
SHROOM1-205ENST00000488072 C2orf82Q6UX34 121 aa10.97□□□□□ -0.65
SHROOM1-205ENST00000488072 UNQ6190/PRO20217Q6UXQ8 127 aa10.97□□□□□ -0.65
SHROOM1-205ENST00000488072 SCXQ7RTU7 201 aa10.97□□□□□ -0.65
SHROOM1-205ENST00000488072 LINC00469Q8N7U9 141 aa10.97□□□□□ -0.65
SHROOM1-205ENST00000488072 CARD19Q96LW7 228 aa10.97□□□□□ -0.65
SHROOM1-205ENST00000488072 GEMIN7Q9H840 131 aaKnown RBP10.97□□□□□ -0.65
SHROOM1-205ENST00000488072 TINCRA0A1B0GVN0 87 aa10.96□□□□□ -0.65
SHROOM1-205ENST00000488072 ATP5LO75964 103 aa10.96□□□□□ -0.65
SHROOM1-205ENST00000488072 APOMO95445 188 aa10.96□□□□□ -0.65
SHROOM1-205ENST00000488072 SPINK8P0C7L1 97 aa10.96□□□□□ -0.65
SHROOM1-205ENST00000488072 FABP4P15090 132 aa10.96□□□□□ -0.65
SHROOM1-205ENST00000488072 IFI27L1Q96BM0 104 aa10.96□□□□□ -0.65
SHROOM1-205ENST00000488072 CAMK2N2Q96S95 79 aa10.96□□□□□ -0.65
SHROOM1-205ENST00000488072 LINC01549A6NIU2 74 aa10.95□□□□□ -0.66
SHROOM1-205ENST00000488072 HERVK_113P63121 156 aa10.95□□□□□ -0.66
SHROOM1-205ENST00000488072 OR10D4PQ8NGN7 298 aa10.95□□□□□ -0.66
SHROOM1-205ENST00000488072 TOMM7Q9P0U1 55 aa10.95□□□□□ -0.66
SHROOM1-205ENST00000488072 IGLV5-45A0A087WSX0 123 aa10.94□□□□□ -0.66
SHROOM1-205ENST00000488072 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.94□□□□□ -0.66
SHROOM1-205ENST00000488072 C11orf86A6NJI1 115 aa10.94□□□□□ -0.66
SHROOM1-205ENST00000488072 H0Y8G0 127 aa10.94□□□□□ -0.66
SHROOM1-205ENST00000488072 IGLC3P0DOY3 106 aa10.94□□□□□ -0.66
SHROOM1-205ENST00000488072 CIRBP-AS1Q8TBR5 109 aa10.94□□□□□ -0.66
SHROOM1-205ENST00000488072 CHAC1Q9BUX1 264 aa10.94□□□□□ -0.66
SHROOM1-205ENST00000488072 A0A096LNI7 61 aa10.93□□□□□ -0.66
SHROOM1-205ENST00000488072 IGKV2-24A0A0C4DH68 120 aa10.93□□□□□ -0.66
SHROOM1-205ENST00000488072 SMIM1B2RUZ4 78 aa10.93□□□□□ -0.66
SHROOM1-205ENST00000488072 ZNF22P17026 224 aaPredicted RBP10.93□□□□□ -0.66
SHROOM1-205ENST00000488072 C2orf48Q96LS8 159 aa10.93□□□□□ -0.66
SHROOM1-205ENST00000488072 C6orf48Q9UBA6 75 aa10.93□□□□□ -0.66
SHROOM1-205ENST00000488072 CHTOPQ9Y3Y2 248 aaKnown RBP10.92□□□□□ -0.66
SHROOM1-205ENST00000488072 LEPROTL1O95214 131 aa10.91□□□□□ -0.66
SHROOM1-205ENST00000488072 C9orf116Q5BN46 136 aaPredicted RBP10.91□□□□□ -0.66
SHROOM1-205ENST00000488072 LINC01561Q8N1V8 128 aa10.91□□□□□ -0.66
SHROOM1-205ENST00000488072 MRPL35Q9NZE8 188 aaKnown RBP10.91□□□□□ -0.66
SHROOM1-205ENST00000488072 SEC11AP67812 179 aa10.9□□□□□ -0.66
SHROOM1-205ENST00000488072 PACRGQ96M98 296 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms