RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 FAM30AQ9NZY2 134 aa6.06□□□□□ -1.44
LCN2-205ENST00000487719 LINC00474Q9P2X8 69 aa6.06□□□□□ -1.44
LCN2-205ENST00000487719 APOBP04114 4563 aaKnown RBP6.05□□□□□ -1.44
LCN2-205ENST00000487719 HSPG2P98160 4391 aa6.05□□□□□ -1.44
LCN2-205ENST00000487719 SMR3BP02814 79 aaPredicted RBP6.05□□□□□ -1.44
LCN2-205ENST00000487719 SYCNQ0VAF6 134 aa6.05□□□□□ -1.44
LCN2-205ENST00000487719 SCXQ7RTU7 201 aa6.05□□□□□ -1.44
LCN2-205ENST00000487719 TOMM6Q96B49 74 aa6.05□□□□□ -1.44
LCN2-205ENST00000487719 SCGB3A1Q96QR1 104 aa6.05□□□□□ -1.44
LCN2-205ENST00000487719 CAMK2N2Q96S95 79 aa6.05□□□□□ -1.44
LCN2-205ENST00000487719 TIMM17AQ99595 171 aa6.05□□□□□ -1.44
LCN2-205ENST00000487719 OPRPNQ99935 248 aaPredicted RBP6.05□□□□□ -1.44
LCN2-205ENST00000487719 F8WDY8 70 aa6.04□□□□□ -1.44
LCN2-205ENST00000487719 SPAG11BQ08648 103 aa6.04□□□□□ -1.44
LCN2-205ENST00000487719 ERASQ7Z444 233 aa6.04□□□□□ -1.44
LCN2-205ENST00000487719 LINC00528Q8N1L1 170 aa6.04□□□□□ -1.44
LCN2-205ENST00000487719 ORAOV1Q8WV07 137 aa6.04□□□□□ -1.44
LCN2-205ENST00000487719 C2orf48Q96LS8 159 aa6.04□□□□□ -1.44
LCN2-205ENST00000487719 GEMIN7Q9H840 131 aaKnown RBP6.04□□□□□ -1.44
LCN2-205ENST00000487719 IGLV4-69A0A075B6H9 119 aa6.03□□□□□ -1.44
LCN2-205ENST00000487719 IGHV3OR16-9A0A0B4J2B5 98 aa6.03□□□□□ -1.44
LCN2-205ENST00000487719 NDUFA1O15239 70 aa6.03□□□□□ -1.44
LCN2-205ENST00000487719 PRSS2P07478 247 aa6.03□□□□□ -1.44
LCN2-205ENST00000487719 HERVK_113P63121 156 aa6.03□□□□□ -1.44
LCN2-205ENST00000487719 COX6A2Q02221 97 aa6.03□□□□□ -1.44
LCN2-205ENST00000487719 SDIM1Q6ZPB5 146 aa6.03□□□□□ -1.44
LCN2-205ENST00000487719 CIRBP-AS1Q8TBR5 109 aa6.03□□□□□ -1.44
LCN2-205ENST00000487719 PACRGQ96M98 296 aaPredicted RBP6.03□□□□□ -1.44
LCN2-205ENST00000487719 IGKV2-24A0A0C4DH68 120 aa6.02□□□□□ -1.45
LCN2-205ENST00000487719 LOC107984640A0A0U1RRK4 108 aa6.02□□□□□ -1.45
LCN2-205ENST00000487719 IGIPA6NJ69 53 aa6.02□□□□□ -1.45
LCN2-205ENST00000487719 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.02□□□□□ -1.45
LCN2-205ENST00000487719 UBE2D1P51668 147 aa6.02□□□□□ -1.45
LCN2-205ENST00000487719 LINC00526Q96FQ7 95 aa6.02□□□□□ -1.45
LCN2-205ENST00000487719 AMELXQ99217 191 aa6.02□□□□□ -1.45
LCN2-205ENST00000487719 A0A087WZ39 114 aa6.01□□□□□ -1.45
LCN2-205ENST00000487719 LINC01546A6NGU7 62 aa6.01□□□□□ -1.45
LCN2-205ENST00000487719 HBDP02042 147 aa6.01□□□□□ -1.45
LCN2-205ENST00000487719 SLPIP03973 132 aa6.01□□□□□ -1.45
LCN2-205ENST00000487719 LINC00614P0C842 121 aa6.01□□□□□ -1.45
LCN2-205ENST00000487719 INAFM2P0DMQ5 153 aa6.01□□□□□ -1.45
LCN2-205ENST00000487719 MAJINQ3KP22 176 aa6.01□□□□□ -1.45
LCN2-205ENST00000487719 LINC00242Q5T6M2 205 aa6.01□□□□□ -1.45
LCN2-205ENST00000487719 LINC01561Q8N1V8 128 aa6.01□□□□□ -1.45
LCN2-205ENST00000487719 C7orf33Q8WU49 177 aa6.01□□□□□ -1.45
LCN2-205ENST00000487719 CBLN2Q8IUK8 224 aa6□□□□□ -1.45
LCN2-205ENST00000487719 SLC7A5P1Q8MH63 180 aa6□□□□□ -1.45
LCN2-205ENST00000487719 C18orf32Q8TCD1 76 aa6□□□□□ -1.45
LCN2-205ENST00000487719 SPACA4Q8TDM5 124 aa6□□□□□ -1.45
LCN2-205ENST00000487719 FAM104AQ969W3 186 aa6□□□□□ -1.45
LCN2-205ENST00000487719 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6□□□□□ -1.45
LCN2-205ENST00000487719 PCLOQ9Y6V0 5065 aa5.99□□□□□ -1.45
LCN2-205ENST00000487719 H3BRM9 83 aa5.99□□□□□ -1.45
LCN2-205ENST00000487719 ATP5LO75964 103 aa5.99□□□□□ -1.45
LCN2-205ENST00000487719 NDUFA6P56556 154 aa5.99□□□□□ -1.45
LCN2-205ENST00000487719 CKS1BP61024 79 aa5.99□□□□□ -1.45
LCN2-205ENST00000487719 RPL37AP61513 92 aaKnown RBP5.99□□□□□ -1.45
LCN2-205ENST00000487719 RPL18AQ02543 176 aaKnown RBP5.99□□□□□ -1.45
LCN2-205ENST00000487719 CIRBPQ14011 172 aaKnown RBP5.99□□□□□ -1.45
LCN2-205ENST00000487719 PMVKQ15126 192 aa5.99□□□□□ -1.45
LCN2-205ENST00000487719 RNF151Q2KHN1 245 aa5.99□□□□□ -1.45
LCN2-205ENST00000487719 Q6ZRU5 148 aa5.99□□□□□ -1.45
LCN2-205ENST00000487719 LINC00173Q6ZV60 143 aa5.99□□□□□ -1.45
LCN2-205ENST00000487719 LINC00469Q8N7U9 141 aa5.99□□□□□ -1.45
LCN2-205ENST00000487719 TOMM7Q9P0U1 55 aa5.99□□□□□ -1.45
LCN2-205ENST00000487719 FLG2Q5D862 2391 aaPredicted RBP5.98□□□□□ -1.45
LCN2-205ENST00000487719 A0A087WYN8 130 aa5.98□□□□□ -1.45
LCN2-205ENST00000487719 CHTF8P0CG12 524 aa5.98□□□□□ -1.45
LCN2-205ENST00000487719 GAGE2BQ13066 116 aa5.98□□□□□ -1.45
LCN2-205ENST00000487719 C6orf226Q5I0X4 101 aa5.98□□□□□ -1.45
LCN2-205ENST00000487719 FAM19A3Q7Z5A8 133 aa5.98□□□□□ -1.45
LCN2-205ENST00000487719 BAGE3Q86Y29 109 aa5.98□□□□□ -1.45
LCN2-205ENST00000487719 STPG4Q8N801 248 aa5.98□□□□□ -1.45
LCN2-205ENST00000487719 CHCHD1Q96BP2 118 aaKnown RBP5.98□□□□□ -1.45
LCN2-205ENST00000487719 KRTAP4-5Q9BYR2 181 aa5.98□□□□□ -1.45
LCN2-205ENST00000487719 MRPL35Q9NZE8 188 aaKnown RBP5.98□□□□□ -1.45
LCN2-205ENST00000487719 A0A096LNI7 61 aa5.97□□□□□ -1.45
LCN2-205ENST00000487719 TRBV30A0A0K0K1B3 111 aa5.97□□□□□ -1.45
LCN2-205ENST00000487719 TINCRA0A1B0GVN0 87 aa5.97□□□□□ -1.45
LCN2-205ENST00000487719 HSBP1O75506 76 aa5.97□□□□□ -1.45
LCN2-205ENST00000487719 CXCL5P42830 114 aa5.97□□□□□ -1.45
LCN2-205ENST00000487719 PTTG1IPP53801 180 aa5.97□□□□□ -1.45
LCN2-205ENST00000487719 ZC2HC1BQ5TFG8 222 aa5.97□□□□□ -1.45
LCN2-205ENST00000487719 CST9LQ9H4G1 147 aa5.97□□□□□ -1.45
LCN2-205ENST00000487719 A0A0J9YXV3 536 aa5.96□□□□□ -1.46
LCN2-205ENST00000487719 Q8IZM0 81 aa5.96□□□□□ -1.46
LCN2-205ENST00000487719 YPEL4Q96NS1 127 aa5.96□□□□□ -1.46
LCN2-205ENST00000487719 PLAC8Q9NZF1 115 aa5.96□□□□□ -1.46
LCN2-205ENST00000487719 CDKN2A-AS1Q9UH64 79 aa5.96□□□□□ -1.46
LCN2-205ENST00000487719 SRRM2Q9UQ35 2752 aaKnown RBP5.95□□□□□ -1.46
LCN2-205ENST00000487719 PANO1I0J062 215 aa5.95□□□□□ -1.46
LCN2-205ENST00000487719 ABCA13Q86UQ4 5058 aa5.95□□□□□ -1.46
LCN2-205ENST00000487719 DNAH8Q96JB1 4490 aa5.94□□□□□ -1.46
LCN2-205ENST00000487719 TRGC2P03986 189 aa5.94□□□□□ -1.46
LCN2-205ENST00000487719 PMCHL1Q16048 86 aa5.94□□□□□ -1.46
LCN2-205ENST00000487719 PDZD11Q5EBL8 140 aa5.94□□□□□ -1.46
LCN2-205ENST00000487719 UNQ6190/PRO20217Q6UXQ8 127 aa5.94□□□□□ -1.46
LCN2-205ENST00000487719 DMBT1Q9UGM3 2413 aaPredicted RBP5.93□□□□□ -1.46
LCN2-205ENST00000487719 NDUFC2-KCTD14E9PQ53 114 aa5.93□□□□□ -1.46
LCN2-205ENST00000487719 F8VRH5 84 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms