RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 UBE2D1P51668 147 aa12.73□□□□□ -0.37
SEC22A-208ENST00000487572 GVQW2A0A096LPI5 108 aaPredicted RBP12.72□□□□□ -0.37
SEC22A-208ENST00000487572 LINC00242Q5T6M2 205 aa12.72□□□□□ -0.37
SEC22A-208ENST00000487572 CHCHD1Q96BP2 118 aaKnown RBP12.72□□□□□ -0.37
SEC22A-208ENST00000487572 COX6A2Q02221 97 aa12.71□□□□□ -0.37
SEC22A-208ENST00000487572 LINC00526Q96FQ7 95 aa12.71□□□□□ -0.37
SEC22A-208ENST00000487572 IGHV3OR16-9A0A0B4J2B5 98 aa12.7□□□□□ -0.38
SEC22A-208ENST00000487572 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.7□□□□□ -0.38
SEC22A-208ENST00000487572 SLPIP03973 132 aa12.7□□□□□ -0.38
SEC22A-208ENST00000487572 LRP1BQ9NZR2 4599 aa12.69□□□□□ -0.38
SEC22A-208ENST00000487572 CNBPP62633 177 aaKnown RBP12.69□□□□□ -0.38
SEC22A-208ENST00000487572 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.68□□□□□ -0.38
SEC22A-208ENST00000487572 ZNF561-AS1K7EIQ3 104 aa12.68□□□□□ -0.38
SEC22A-208ENST00000487572 APOMO95445 188 aa12.68□□□□□ -0.38
SEC22A-208ENST00000487572 PDZD11Q5EBL8 140 aa12.68□□□□□ -0.38
SEC22A-208ENST00000487572 HSBP1O75506 76 aa12.67□□□□□ -0.38
SEC22A-208ENST00000487572 CDK2AP2O75956 126 aa12.67□□□□□ -0.38
SEC22A-208ENST00000487572 NDUFA6P56556 154 aa12.67□□□□□ -0.38
SEC22A-208ENST00000487572 CST9LQ9H4G1 147 aa12.67□□□□□ -0.38
SEC22A-208ENST00000487572 A0A0J9YXV3 536 aa12.66□□□□□ -0.38
SEC22A-208ENST00000487572 SERF1AO75920 110 aa12.66□□□□□ -0.38
SEC22A-208ENST00000487572 PMVKQ15126 192 aa12.66□□□□□ -0.38
SEC22A-208ENST00000487572 C9orf163Q8N9P6 203 aa12.66□□□□□ -0.38
SEC22A-208ENST00000487572 ORAOV1Q8WV07 137 aa12.66□□□□□ -0.38
SEC22A-208ENST00000487572 GEMIN7Q9H840 131 aaKnown RBP12.66□□□□□ -0.38
SEC22A-208ENST00000487572 IGLV4-69A0A075B6H9 119 aa12.65□□□□□ -0.38
SEC22A-208ENST00000487572 HAMPP81172 84 aa12.65□□□□□ -0.38
SEC22A-208ENST00000487572 FAM19A2Q8N3H0 131 aa12.65□□□□□ -0.38
SEC22A-208ENST00000487572 FAM30AQ9NZY2 134 aa12.65□□□□□ -0.38
SEC22A-208ENST00000487572 IGHV3-64A0A075B6Q5 118 aa12.64□□□□□ -0.39
SEC22A-208ENST00000487572 A0A087WZ39 114 aa12.64□□□□□ -0.39
SEC22A-208ENST00000487572 ATP5LO75964 103 aa12.64□□□□□ -0.39
SEC22A-208ENST00000487572 LINC00310P59036 64 aa12.64□□□□□ -0.39
SEC22A-208ENST00000487572 HERVK_113P63121 156 aa12.64□□□□□ -0.39
SEC22A-208ENST00000487572 SEC11AP67812 179 aa12.64□□□□□ -0.39
SEC22A-208ENST00000487572 SPAG11BQ08648 103 aa12.64□□□□□ -0.39
SEC22A-208ENST00000487572 FAM19A3Q7Z5A8 133 aa12.64□□□□□ -0.39
SEC22A-208ENST00000487572 OR10D4PQ8NGN7 298 aa12.63□□□□□ -0.39
SEC22A-208ENST00000487572 CARD19Q96LW7 228 aa12.62□□□□□ -0.39
SEC22A-208ENST00000487572 KIAA1109Q2LD37 5005 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 HIST1H2BKO60814 126 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 HIST1H2BJP06899 126 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 HIST1H2BOP23527 126 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 HIST1H2BBP33778 126 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 XGP55808 180 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 HIST1H2BDP58876 126 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 HIST1H2BCP62807 126 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 SYCNQ0VAF6 134 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 HIST2H2BEQ16778 126 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.61□□□□□ -0.39
SEC22A-208ENST00000487572 LINC00469Q8N7U9 141 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 HIST1H2BHQ93079 126 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 CAMK2N2Q96S95 79 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 HIST1H2BNQ99877 126 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 HIST1H2BMQ99879 126 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 CDKN2A-AS1Q9UH64 79 aa12.61□□□□□ -0.39
SEC22A-208ENST00000487572 TINCRA0A1B0GVN0 87 aa12.6□□□□□ -0.39
SEC22A-208ENST00000487572 NUPR1O60356 82 aa12.6□□□□□ -0.39
SEC22A-208ENST00000487572 SDIM1Q6ZPB5 146 aa12.59□□□□□ -0.39
SEC22A-208ENST00000487572 Q6ZSA8 131 aa12.59□□□□□ -0.39
SEC22A-208ENST00000487572 IFI27L1Q96BM0 104 aa12.59□□□□□ -0.39
SEC22A-208ENST00000487572 Q6ZRU5 148 aa12.58□□□□□ -0.4
SEC22A-208ENST00000487572 LINC01561Q8N1V8 128 aa12.58□□□□□ -0.4
SEC22A-208ENST00000487572 C2orf48Q96LS8 159 aa12.58□□□□□ -0.4
SEC22A-208ENST00000487572 PACRGQ96M98 296 aaPredicted RBP12.58□□□□□ -0.4
SEC22A-208ENST00000487572 CHAC1Q9BUX1 264 aa12.57□□□□□ -0.4
SEC22A-208ENST00000487572 TOMM7Q9P0U1 55 aa12.57□□□□□ -0.4
SEC22A-208ENST00000487572 APOBP04114 4563 aaKnown RBP12.57□□□□□ -0.4
SEC22A-208ENST00000487572 IGLC3P0DOY3 106 aa12.56□□□□□ -0.4
SEC22A-208ENST00000487572 IGLV5-45A0A087WSX0 123 aa12.55□□□□□ -0.4
SEC22A-208ENST00000487572 LEPROTL1O95214 131 aa12.55□□□□□ -0.4
SEC22A-208ENST00000487572 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.55□□□□□ -0.4
SEC22A-208ENST00000487572 RYR1P21817 5038 aa12.54□□□□□ -0.4
SEC22A-208ENST00000487572 H0Y8G0 127 aa12.54□□□□□ -0.4
SEC22A-208ENST00000487572 PANO1I0J062 215 aa12.54□□□□□ -0.4
SEC22A-208ENST00000487572 NDUFA1O15239 70 aa12.54□□□□□ -0.4
SEC22A-208ENST00000487572 PRSS2P07478 247 aa12.54□□□□□ -0.4
SEC22A-208ENST00000487572 SPINK8P0C7L1 97 aa12.54□□□□□ -0.4
SEC22A-208ENST00000487572 CHTF8P0CG12 524 aa12.54□□□□□ -0.4
SEC22A-208ENST00000487572 FABP4P15090 132 aa12.54□□□□□ -0.4
SEC22A-208ENST00000487572 KIAA0087Q14695 138 aa12.54□□□□□ -0.4
SEC22A-208ENST00000487572 SCXQ7RTU7 201 aa12.54□□□□□ -0.4
SEC22A-208ENST00000487572 CHTOPQ9Y3Y2 248 aaKnown RBP12.54□□□□□ -0.4
SEC22A-208ENST00000487572 IGKV2-24A0A0C4DH68 120 aa12.52□□□□□ -0.41
SEC22A-208ENST00000487572 SMIM1B2RUZ4 78 aa12.52□□□□□ -0.41
SEC22A-208ENST00000487572 H3BRM9 83 aa12.52□□□□□ -0.41
SEC22A-208ENST00000487572 SMR3BP02814 79 aaPredicted RBP12.52□□□□□ -0.41
SEC22A-208ENST00000487572 C10orf25Q5T742 122 aa12.52□□□□□ -0.41
SEC22A-208ENST00000487572 C2orf82Q6UX34 121 aa12.52□□□□□ -0.41
SEC22A-208ENST00000487572 UNQ6190/PRO20217Q6UXQ8 127 aa12.52□□□□□ -0.41
SEC22A-208ENST00000487572 DPH3Q96FX2 82 aa12.52□□□□□ -0.41
SEC22A-208ENST00000487572 TRAV12-1A0A0B4J245 112 aa12.51□□□□□ -0.41
SEC22A-208ENST00000487572 C11orf86A6NJI1 115 aa12.51□□□□□ -0.41
SEC22A-208ENST00000487572 F8WDY8 70 aa12.51□□□□□ -0.41
SEC22A-208ENST00000487572 C6orf226Q5I0X4 101 aa12.51□□□□□ -0.41
SEC22A-208ENST00000487572 CIRBP-AS1Q8TBR5 109 aa12.51□□□□□ -0.41
SEC22A-208ENST00000487572 HSPB8Q9UJY1 196 aa12.51□□□□□ -0.41
SEC22A-208ENST00000487572 HERC2O95714 4834 aa12.51□□□□□ -0.41
SEC22A-208ENST00000487572 HSPG2P98160 4391 aa12.51□□□□□ -0.41
SEC22A-208ENST00000487572 DNAH8Q96JB1 4490 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms