RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 SMDT1Q9H4I9 107 aa2.16□□□□□ -2.06
CNN3-206ENST00000487539 EXTL2Q9UBQ6 330 aa2.16□□□□□ -2.06
CNN3-206ENST00000487539 FLVCR2Q9UPI3 526 aa2.16□□□□□ -2.06
CNN3-206ENST00000487539 H3BMQ9 156 aa2.15□□□□□ -2.07
CNN3-206ENST00000487539 HMGB3O15347 200 aaKnown RBP2.15□□□□□ -2.07
CNN3-206ENST00000487539 TLX1NBP0CAT3 122 aa2.15□□□□□ -2.07
CNN3-206ENST00000487539 NTF3P20783 257 aa2.15□□□□□ -2.07
CNN3-206ENST00000487539 BCAP31P51572 246 aa2.15□□□□□ -2.07
CNN3-206ENST00000487539 TAS2R30P59541 319 aa2.15□□□□□ -2.07
CNN3-206ENST00000487539 SPAG11BQ08648 103 aa2.15□□□□□ -2.07
CNN3-206ENST00000487539 TMEM128Q5BJH2 165 aa2.15□□□□□ -2.07
CNN3-206ENST00000487539 MTURNQ8N3F0 131 aa2.15□□□□□ -2.07
CNN3-206ENST00000487539 LYRM2Q9NU23 88 aaPredicted RBP2.15□□□□□ -2.07
CNN3-206ENST00000487539 MCUBQ9NWR8 336 aa2.15□□□□□ -2.07
CNN3-206ENST00000487539 GSKIPQ9P0R6 139 aa2.15□□□□□ -2.07
CNN3-206ENST00000487539 ANKRD20A5PA0PJZ0 165 aa2.14□□□□□ -2.07
CNN3-206ENST00000487539 DEFA1P59665 94 aa2.14□□□□□ -2.07
CNN3-206ENST00000487539 NEDD8Q15843 81 aa2.14□□□□□ -2.07
CNN3-206ENST00000487539 AMMECR1LQ6DCA0 310 aa2.14□□□□□ -2.07
CNN3-206ENST00000487539 LINC00469Q8N7U9 141 aa2.14□□□□□ -2.07
CNN3-206ENST00000487539 MARVELD1Q9BSK0 173 aa2.14□□□□□ -2.07
CNN3-206ENST00000487539 MRPL35Q9NZE8 188 aaKnown RBP2.14□□□□□ -2.07
CNN3-206ENST00000487539 LSM5Q9Y4Y9 91 aaKnown RBP2.14□□□□□ -2.07
CNN3-206ENST00000487539 ARL2-SNX15V9GYD0 113 aa2.14□□□□□ -2.07
CNN3-206ENST00000487539 C9orf170A2RU37 121 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 G3V3Q6 166 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 K7EQM0 130 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 COX7A2LO14548 114 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 MGPP08493 103 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 SPRR2EP22531 72 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 SPRR2BP35325 72 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 SPRR2AP35326 72 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 NCS1P62166 190 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 PRLHP81277 87 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 COTL1Q14019 142 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 IAH1Q2TAA2 248 aaPredicted RBP2.13□□□□□ -2.07
CNN3-206ENST00000487539 RNASE13Q5GAN3 156 aaKnown RBP2.13□□□□□ -2.07
CNN3-206ENST00000487539 LINC01561Q8N1V8 128 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 PLEKHB2Q96CS7 222 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 PGLYRP4Q96LB8 373 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 SCGB3A2Q96PL1 93 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 IMMP2LQ96T52 175 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 RSL24D1Q9UHA3 163 aaKnown RBP2.13□□□□□ -2.07
CNN3-206ENST00000487539 SCP2D1Q9UJQ7 156 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 EPDR1Q9UM22 224 aa2.13□□□□□ -2.07
CNN3-206ENST00000487539 SCO1O75880 301 aa2.12□□□□□ -2.07
CNN3-206ENST00000487539 UBE2AP49459 152 aa2.12□□□□□ -2.07
CNN3-206ENST00000487539 C2orf82Q6UX34 121 aa2.12□□□□□ -2.07
CNN3-206ENST00000487539 NKAPP1Q8N9T2 125 aa2.12□□□□□ -2.07
CNN3-206ENST00000487539 SMIM4Q8WVI0 70 aa2.12□□□□□ -2.07
CNN3-206ENST00000487539 MED28Q9H204 178 aa2.12□□□□□ -2.07
CNN3-206ENST00000487539 VCX3BQ9H321 246 aa2.12□□□□□ -2.07
CNN3-206ENST00000487539 XAGE1AQ9HD64 81 aa2.12□□□□□ -2.07
CNN3-206ENST00000487539 CDC42SE2Q9NRR3 84 aa2.12□□□□□ -2.07
CNN3-206ENST00000487539 NUDT15Q9NV35 164 aa2.12□□□□□ -2.07
CNN3-206ENST00000487539 L7N2F9 121 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 NDUFA1O15239 70 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 SPINK1P00995 79 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 S100A11P31949 105 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 SULT1A1P50225 295 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 UBE2G2P60604 165 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 VBP1P61758 197 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 SSBP1Q04837 148 aaKnown RBP2.11□□□□□ -2.07
CNN3-206ENST00000487539 KIAA0087Q14695 138 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 KHDC3LQ587J8 217 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 FAM74A1Q5RGS3 127 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 SAPCD1Q5SSQ6 148 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 RASL11AQ6T310 242 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 C5orf17Q8NAS9 161 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 MCFD2Q8NI22 146 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 ORAOV1Q8WV07 137 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 HIST1H4GQ99525 98 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 Q9H521 79 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 CHTOPQ9Y3Y2 248 aaKnown RBP2.11□□□□□ -2.07
CNN3-206ENST00000487539 ALG5Q9Y673 324 aa2.11□□□□□ -2.07
CNN3-206ENST00000487539 TRAV13-1A0A0B4J241 112 aa2.1□□□□□ -2.07
CNN3-206ENST00000487539 SPRR5A0A1B0GTR4 108 aa2.1□□□□□ -2.07
CNN3-206ENST00000487539 OR5AL1P0C617 328 aa2.1□□□□□ -2.07
CNN3-206ENST00000487539 SPANXN1Q5VSR9 72 aa2.1□□□□□ -2.07
CNN3-206ENST00000487539 MRPL55Q7Z7F7 128 aaKnown RBP2.1□□□□□ -2.07
CNN3-206ENST00000487539 RPL39LQ96EH5 51 aaKnown RBP2.1□□□□□ -2.07
CNN3-206ENST00000487539 WDR61Q9GZS3 305 aaKnown RBP2.1□□□□□ -2.07
CNN3-206ENST00000487539 NIT2Q9NQR4 276 aa2.1□□□□□ -2.07
CNN3-206ENST00000487539 NDUFA12Q9UI09 145 aa2.1□□□□□ -2.07
CNN3-206ENST00000487539 BLOC1S6Q9UL45 172 aa2.1□□□□□ -2.07
CNN3-206ENST00000487539 SERTM2A0A1B0GWG4 89 aa2.09□□□□□ -2.07
CNN3-206ENST00000487539 NDUFC2-KCTD14E9PQ53 114 aa2.09□□□□□ -2.07
CNN3-206ENST00000487539 SLC25A20O43772 301 aa2.09□□□□□ -2.07
CNN3-206ENST00000487539 UPK1BO75841 260 aa2.09□□□□□ -2.07
CNN3-206ENST00000487539 ARL14EPLP0DKL9 152 aa2.09□□□□□ -2.07
CNN3-206ENST00000487539 SMIM17P0DL12 118 aa2.09□□□□□ -2.07
CNN3-206ENST00000487539 FOXA3P55318 350 aaPredicted RBP2.09□□□□□ -2.07
CNN3-206ENST00000487539 RPL37P61927 97 aaKnown RBP2.09□□□□□ -2.07
CNN3-206ENST00000487539 TMEM241Q24JQ0 296 aa2.09□□□□□ -2.07
CNN3-206ENST00000487539 PACRGQ96M98 296 aaPredicted RBP2.09□□□□□ -2.07
CNN3-206ENST00000487539 SPRR4Q96PI1 79 aa2.09□□□□□ -2.07
CNN3-206ENST00000487539 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
CNN3-206ENST00000487539 A0A087WXM4 84 aa2.08□□□□□ -2.08
CNN3-206ENST00000487539 A0A096LNJ9 63 aa2.08□□□□□ -2.08
CNN3-206ENST00000487539 PIGBOS1A0A0B4J2F0 54 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms