RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 GNG13Q9P2W3 67 aa8.9□□□□□ -0.98
NME1-208ENST00000487481 TRBV20OR9-2A0A075B6H5 130 aa8.89□□□□□ -0.99
NME1-208ENST00000487481 TRBV27A0A0K0K1C4 114 aa8.89□□□□□ -0.99
NME1-208ENST00000487481 ARPC5O15511 151 aa8.89□□□□□ -0.99
NME1-208ENST00000487481 CRYGAP11844 174 aa8.89□□□□□ -0.99
NME1-208ENST00000487481 C10orf25Q5T742 122 aa8.89□□□□□ -0.99
NME1-208ENST00000487481 C6orf48Q9UBA6 75 aa8.89□□□□□ -0.99
NME1-208ENST00000487481 UBE2D4Q9Y2X8 147 aa8.89□□□□□ -0.99
NME1-208ENST00000487481 KANTRA0A1W2PQU2 76 aa8.88□□□□□ -0.99
NME1-208ENST00000487481 POLR2KP53803 58 aaKnown RBP8.88□□□□□ -0.99
NME1-208ENST00000487481 LINC01547P58512 204 aaPredicted RBP8.88□□□□□ -0.99
NME1-208ENST00000487481 CLLU1Q5K131 121 aa8.88□□□□□ -0.99
NME1-208ENST00000487481 NUPR1O60356 82 aa8.87□□□□□ -0.99
NME1-208ENST00000487481 UNQ6190/PRO20217Q6UXQ8 127 aa8.87□□□□□ -0.99
NME1-208ENST00000487481 Q6ZUT4 128 aa8.87□□□□□ -0.99
NME1-208ENST00000487481 IGLV7-46A0A075B6I9 117 aa8.86□□□□□ -0.99
NME1-208ENST00000487481 LINC00862A6NCI5 91 aa8.86□□□□□ -0.99
NME1-208ENST00000487481 MED9Q9NWA0 146 aa8.86□□□□□ -0.99
NME1-208ENST00000487481 PDE6DO43924 150 aa8.85□□□□□ -0.99
NME1-208ENST00000487481 FCER1GP30273 86 aa8.85□□□□□ -0.99
NME1-208ENST00000487481 IGHV3OR16-9A0A0B4J2B5 98 aa8.84□□□□□ -0.99
NME1-208ENST00000487481 C9orf129Q5T035 196 aaKnown RBP8.83□□□□□ -1
NME1-208ENST00000487481 LINC00173Q6ZV60 143 aa8.83□□□□□ -1
NME1-208ENST00000487481 TIMM21Q9BVV7 248 aa8.83□□□□□ -1
NME1-208ENST00000487481 NDUFC2-KCTD14E9PQ53 114 aa8.82□□□□□ -1
NME1-208ENST00000487481 VCYO14598 125 aa8.82□□□□□ -1
NME1-208ENST00000487481 RPL28P46779 137 aaKnown RBP8.82□□□□□ -1
NME1-208ENST00000487481 SLC7A5P1Q8MH63 180 aa8.82□□□□□ -1
NME1-208ENST00000487481 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
NME1-208ENST00000487481 CTDSP1Q9GZU7 261 aa8.82□□□□□ -1
NME1-208ENST00000487481 TRBV30A0A0K0K1B3 111 aa8.81□□□□□ -1
NME1-208ENST00000487481 K7EN84 100 aa8.8□□□□□ -1
NME1-208ENST00000487481 SRSF3P84103 164 aaKnown RBP8.8□□□□□ -1
NME1-208ENST00000487481 TMEM18Q96B42 140 aa8.8□□□□□ -1
NME1-208ENST00000487481 KIR2DL4Q99706 377 aa8.8□□□□□ -1
NME1-208ENST00000487481 CTAG1AP78358 180 aa8.79□□□□□ -1
NME1-208ENST00000487481 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
NME1-208ENST00000487481 TMEM191AQ9H0A3 160 aa8.79□□□□□ -1
NME1-208ENST00000487481 TEX46H3BTG2 121 aa8.78□□□□□ -1
NME1-208ENST00000487481 KIAA0087Q14695 138 aa8.78□□□□□ -1
NME1-208ENST00000487481 LBHQ53QV2 105 aaPredicted RBP8.78□□□□□ -1
NME1-208ENST00000487481 BORCS7Q96B45 105 aa8.78□□□□□ -1
NME1-208ENST00000487481 A8MWL6 223 aa8.77□□□□□ -1.01
NME1-208ENST00000487481 BCE1O60756 84 aa8.77□□□□□ -1.01
NME1-208ENST00000487481 RAB4AP20338 218 aa8.77□□□□□ -1.01
NME1-208ENST00000487481 SUMO2P61956 95 aaKnown RBP8.77□□□□□ -1.01
NME1-208ENST00000487481 PACRGQ96M98 296 aaPredicted RBP8.77□□□□□ -1.01
NME1-208ENST00000487481 PPDPFQ9H3Y8 114 aa8.77□□□□□ -1.01
NME1-208ENST00000487481 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
NME1-208ENST00000487481 PPP1R17O96001 155 aa8.76□□□□□ -1.01
NME1-208ENST00000487481 COMMD7Q86VX2 200 aa8.76□□□□□ -1.01
NME1-208ENST00000487481 AMN1Q8IY45 258 aa8.76□□□□□ -1.01
NME1-208ENST00000487481 OCC1Q8TAD7 63 aa8.76□□□□□ -1.01
NME1-208ENST00000487481 ANAPC11Q9NYG5 84 aa8.76□□□□□ -1.01
NME1-208ENST00000487481 TGIF2-C20orf24A0A0A6YYL0 155 aa8.75□□□□□ -1.01
NME1-208ENST00000487481 GATCO43716 136 aaKnown RBP8.75□□□□□ -1.01
NME1-208ENST00000487481 FAM229BQ4G0N7 80 aa8.75□□□□□ -1.01
NME1-208ENST00000487481 UQCC3Q6UW78 93 aa8.75□□□□□ -1.01
NME1-208ENST00000487481 ALKAL2Q6UX46 152 aa8.75□□□□□ -1.01
NME1-208ENST00000487481 A0A1B0GUT8 65 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 IFITM10A6NMD0 228 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 SMKR1H3BMG3 65 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 PPP1R2P9O14990 202 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 HBBP68871 147 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 ASB16-AS1Q495Z4 193 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 CT83Q5H943 113 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 LINC00242Q5T6M2 205 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 C2orf82Q6UX34 121 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 NRACQ8N912 160 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 SPANXA1Q9NS26 97 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 TP73-AS1Q9UF72 201 aa8.74□□□□□ -1.01
NME1-208ENST00000487481 BLOC1S1P78537 153 aa8.73□□□□□ -1.01
NME1-208ENST00000487481 MRPS36P82909 103 aaKnown RBP8.73□□□□□ -1.01
NME1-208ENST00000487481 FAM231DQ6ZW35 169 aa8.73□□□□□ -1.01
NME1-208ENST00000487481 RPL39P62891 51 aaKnown RBP8.72□□□□□ -1.01
NME1-208ENST00000487481 MRPL55Q7Z7F7 128 aaKnown RBP8.72□□□□□ -1.01
NME1-208ENST00000487481 ZNF727A8MUV8 499 aa8.71□□□□□ -1.02
NME1-208ENST00000487481 HIGD1CA8MV81 97 aa8.71□□□□□ -1.02
NME1-208ENST00000487481 TCAPO15273 167 aa8.71□□□□□ -1.02
NME1-208ENST00000487481 TAGLN2P37802 199 aaKnown RBP8.71□□□□□ -1.02
NME1-208ENST00000487481 IGKV2D-26A0A0A0MRZ7 120 aa8.7□□□□□ -1.02
NME1-208ENST00000487481 LINC00469Q8N7U9 141 aa8.7□□□□□ -1.02
NME1-208ENST00000487481 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
NME1-208ENST00000487481 FP248Q71RG6 208 aaPredicted RBP8.69□□□□□ -1.02
NME1-208ENST00000487481 LINC00337Q8N6G1 96 aa8.69□□□□□ -1.02
NME1-208ENST00000487481 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
NME1-208ENST00000487481 KRTAP13-1Q8IUC0 172 aa8.68□□□□□ -1.02
NME1-208ENST00000487481 RPL32P62910 135 aaKnown RBP8.67□□□□□ -1.02
NME1-208ENST00000487481 LINC01561Q8N1V8 128 aa8.67□□□□□ -1.02
NME1-208ENST00000487481 C20orf78Q9BR46 151 aa8.67□□□□□ -1.02
NME1-208ENST00000487481 UBE2AP49459 152 aa8.66□□□□□ -1.02
NME1-208ENST00000487481 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
NME1-208ENST00000487481 KRTAP13-3Q3SY46 172 aa8.66□□□□□ -1.02
NME1-208ENST00000487481 PRSS2P07478 247 aa8.65□□□□□ -1.02
NME1-208ENST00000487481 CKS1BP61024 79 aa8.65□□□□□ -1.02
NME1-208ENST00000487481 RIGQ13278 110 aa8.65□□□□□ -1.02
NME1-208ENST00000487481 TRBV24-1A0A075B6N3 115 aa8.64□□□□□ -1.03
NME1-208ENST00000487481 RPL37AP8A6NKH3 93 aa8.64□□□□□ -1.03
NME1-208ENST00000487481 LINC00167Q96N53 147 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms