RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 KRTAP10-2P60368 255 aa12.71□□□□□ -0.37
PCOLCE-208ENST00000487172 COA6Q5JTJ3 125 aaKnown RBP12.71□□□□□ -0.37
PCOLCE-208ENST00000487172 CDPF1Q6NVV7 123 aa12.71□□□□□ -0.37
PCOLCE-208ENST00000487172 CST9LQ9H4G1 147 aa12.71□□□□□ -0.37
PCOLCE-208ENST00000487172 SEC11AP67812 179 aa12.7□□□□□ -0.38
PCOLCE-208ENST00000487172 C15orf56Q8N910 161 aa12.7□□□□□ -0.38
PCOLCE-208ENST00000487172 COX7A2LO14548 114 aa12.69□□□□□ -0.38
PCOLCE-208ENST00000487172 COX6A2Q02221 97 aa12.69□□□□□ -0.38
PCOLCE-208ENST00000487172 PKD1P98161 4303 aa12.69□□□□□ -0.38
PCOLCE-208ENST00000487172 IGHV1-58A0A0C4DH39 117 aa12.68□□□□□ -0.38
PCOLCE-208ENST00000487172 PRSS1P07477 247 aa12.68□□□□□ -0.38
PCOLCE-208ENST00000487172 IFI27L1Q96BM0 104 aa12.68□□□□□ -0.38
PCOLCE-208ENST00000487172 LEPROTL1O95214 131 aa12.67□□□□□ -0.38
PCOLCE-208ENST00000487172 HERVK_113P63121 156 aa12.67□□□□□ -0.38
PCOLCE-208ENST00000487172 C5orf38Q86SI9 138 aa12.67□□□□□ -0.38
PCOLCE-208ENST00000487172 LINC01561Q8N1V8 128 aa12.67□□□□□ -0.38
PCOLCE-208ENST00000487172 A0A087WZ39 114 aa12.66□□□□□ -0.38
PCOLCE-208ENST00000487172 GVQW2A0A096LPI5 108 aaPredicted RBP12.66□□□□□ -0.38
PCOLCE-208ENST00000487172 TINCRA0A1B0GVN0 87 aa12.66□□□□□ -0.38
PCOLCE-208ENST00000487172 APOMO95445 188 aa12.66□□□□□ -0.38
PCOLCE-208ENST00000487172 MALP21145 153 aa12.66□□□□□ -0.38
PCOLCE-208ENST00000487172 DNAH11Q96DT5 4516 aa12.66□□□□□ -0.38
PCOLCE-208ENST00000487172 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.65□□□□□ -0.38
PCOLCE-208ENST00000487172 A0A0J9YXV3 536 aa12.65□□□□□ -0.38
PCOLCE-208ENST00000487172 NDUFA6P56556 154 aa12.65□□□□□ -0.38
PCOLCE-208ENST00000487172 IGLV5-52A0A0A0MRZ9 124 aa12.64□□□□□ -0.39
PCOLCE-208ENST00000487172 TRAV12-1A0A0B4J245 112 aa12.64□□□□□ -0.39
PCOLCE-208ENST00000487172 hDV102S1A0JD36 115 aa12.64□□□□□ -0.39
PCOLCE-208ENST00000487172 PACRGQ96M98 296 aaPredicted RBP12.64□□□□□ -0.39
PCOLCE-208ENST00000487172 GEMIN7Q9H840 131 aaKnown RBP12.64□□□□□ -0.39
PCOLCE-208ENST00000487172 HSPB8Q9UJY1 196 aa12.64□□□□□ -0.39
PCOLCE-208ENST00000487172 IGLV5-45A0A087WSX0 123 aa12.63□□□□□ -0.39
PCOLCE-208ENST00000487172 IGHV3-64A0A075B6Q5 118 aa12.62□□□□□ -0.39
PCOLCE-208ENST00000487172 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
PCOLCE-208ENST00000487172 CNBPP62633 177 aaKnown RBP12.62□□□□□ -0.39
PCOLCE-208ENST00000487172 HECTD4Q9Y4D8 3996 aa12.62□□□□□ -0.39
PCOLCE-208ENST00000487172 C16orf90A8MZG2 172 aa12.61□□□□□ -0.39
PCOLCE-208ENST00000487172 FUSP35637 526 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCOLCE-208ENST00000487172 HIGD2BQ4VC39 106 aa12.61□□□□□ -0.39
PCOLCE-208ENST00000487172 OR10D4PQ8NGN7 298 aa12.61□□□□□ -0.39
PCOLCE-208ENST00000487172 CDKN2A-AS1Q9UH64 79 aa12.61□□□□□ -0.39
PCOLCE-208ENST00000487172 ZNF561-AS1K7EIQ3 104 aa12.6□□□□□ -0.39
PCOLCE-208ENST00000487172 SLPIP03973 132 aa12.6□□□□□ -0.39
PCOLCE-208ENST00000487172 FABP4P15090 132 aa12.6□□□□□ -0.39
PCOLCE-208ENST00000487172 IGLV4-69A0A075B6H9 119 aa12.59□□□□□ -0.39
PCOLCE-208ENST00000487172 GCSHP23434 173 aa12.59□□□□□ -0.39
PCOLCE-208ENST00000487172 CHTOPQ9Y3Y2 248 aaKnown RBP12.59□□□□□ -0.39
PCOLCE-208ENST00000487172 LINC00469Q8N7U9 141 aa12.58□□□□□ -0.4
PCOLCE-208ENST00000487172 C9orf163Q8N9P6 203 aa12.58□□□□□ -0.4
PCOLCE-208ENST00000487172 ORAOV1Q8WV07 137 aa12.58□□□□□ -0.4
PCOLCE-208ENST00000487172 C2orf48Q96LS8 159 aa12.58□□□□□ -0.4
PCOLCE-208ENST00000487172 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.57□□□□□ -0.4
PCOLCE-208ENST00000487172 F8VRH5 84 aa12.57□□□□□ -0.4
PCOLCE-208ENST00000487172 CHAC1Q9BUX1 264 aa12.57□□□□□ -0.4
PCOLCE-208ENST00000487172 F8WDY8 70 aa12.56□□□□□ -0.4
PCOLCE-208ENST00000487172 SPAG11BQ08648 103 aa12.56□□□□□ -0.4
PCOLCE-208ENST00000487172 MAP1LC3CQ9BXW4 147 aa12.56□□□□□ -0.4
PCOLCE-208ENST00000487172 KIAA0087Q14695 138 aa12.55□□□□□ -0.4
PCOLCE-208ENST00000487172 ODF1Q14990 250 aa12.55□□□□□ -0.4
PCOLCE-208ENST00000487172 LINC00526Q96FQ7 95 aa12.55□□□□□ -0.4
PCOLCE-208ENST00000487172 MRPL35Q9NZE8 188 aaKnown RBP12.55□□□□□ -0.4
PCOLCE-208ENST00000487172 C11orf86A6NJI1 115 aa12.54□□□□□ -0.4
PCOLCE-208ENST00000487172 H3BRM9 83 aa12.54□□□□□ -0.4
PCOLCE-208ENST00000487172 ZNF22P17026 224 aaPredicted RBP12.54□□□□□ -0.4
PCOLCE-208ENST00000487172 EPPK1P58107 5090 aaKnown RBP12.54□□□□□ -0.4
PCOLCE-208ENST00000487172 DNAH5Q8TE73 4624 aa12.53□□□□□ -0.4
PCOLCE-208ENST00000487172 KRTAP10-1P60331 282 aa12.53□□□□□ -0.4
PCOLCE-208ENST00000487172 SYCNQ0VAF6 134 aa12.53□□□□□ -0.4
PCOLCE-208ENST00000487172 SMIM1B2RUZ4 78 aa12.52□□□□□ -0.41
PCOLCE-208ENST00000487172 S100A6P06703 90 aa12.52□□□□□ -0.41
PCOLCE-208ENST00000487172 Q8IZM0 81 aa12.52□□□□□ -0.41
PCOLCE-208ENST00000487172 H0Y8G0 127 aa12.51□□□□□ -0.41
PCOLCE-208ENST00000487172 CAMK2N2Q96S95 79 aa12.51□□□□□ -0.41
PCOLCE-208ENST00000487172 SYS1-DBNDD2H3BUS1 97 aa12.5□□□□□ -0.41
PCOLCE-208ENST00000487172 SPINK8P0C7L1 97 aa12.5□□□□□ -0.41
PCOLCE-208ENST00000487172 LINC01620Q4KN68 170 aa12.5□□□□□ -0.41
PCOLCE-208ENST00000487172 TMEM170BQ5T4T1 132 aa12.5□□□□□ -0.41
PCOLCE-208ENST00000487172 CARD19Q96LW7 228 aa12.5□□□□□ -0.41
PCOLCE-208ENST00000487172 DYNC1H1Q14204 4646 aaKnown RBP12.49□□□□□ -0.41
PCOLCE-208ENST00000487172 NDUFA1O15239 70 aa12.49□□□□□ -0.41
PCOLCE-208ENST00000487172 RNF151Q2KHN1 245 aa12.49□□□□□ -0.41
PCOLCE-208ENST00000487172 SDIM1Q6ZPB5 146 aa12.49□□□□□ -0.41
PCOLCE-208ENST00000487172 Q6ZRU5 148 aa12.49□□□□□ -0.41
PCOLCE-208ENST00000487172 HIST3H2BBQ8N257 126 aa12.49□□□□□ -0.41
PCOLCE-208ENST00000487172 IGLV5-39A0A0G2JS06 123 aa12.48□□□□□ -0.41
PCOLCE-208ENST00000487172 PRSS2P07478 247 aa12.48□□□□□ -0.41
PCOLCE-208ENST00000487172 C6orf226Q5I0X4 101 aa12.48□□□□□ -0.41
PCOLCE-208ENST00000487172 PET117Q6UWS5 81 aa12.48□□□□□ -0.41
PCOLCE-208ENST00000487172 TOMM7Q9P0U1 55 aa12.48□□□□□ -0.41
PCOLCE-208ENST00000487172 PKHD1P08F94 4074 aa12.48□□□□□ -0.41
PCOLCE-208ENST00000487172 C3orf79P0CE67 100 aa12.47□□□□□ -0.41
PCOLCE-208ENST00000487172 PLNP26678 52 aa12.47□□□□□ -0.41
PCOLCE-208ENST00000487172 TMEM223A0PJW6 202 aa12.46□□□□□ -0.41
PCOLCE-208ENST00000487172 DPM2O94777 84 aa12.46□□□□□ -0.41
PCOLCE-208ENST00000487172 S100A2P29034 98 aa12.46□□□□□ -0.41
PCOLCE-208ENST00000487172 CXCL5P42830 114 aa12.46□□□□□ -0.41
PCOLCE-208ENST00000487172 SNRPEP62304 92 aaKnown RBP12.46□□□□□ -0.41
PCOLCE-208ENST00000487172 COX7B2Q8TF08 81 aa12.46□□□□□ -0.41
PCOLCE-208ENST00000487172 PKIGQ9Y2B9 76 aa12.46□□□□□ -0.41
PCOLCE-208ENST00000487172 C5orf52A6NGY3 159 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms