RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 INSP01308 110 aa9.03□□□□□ -0.96
SHROOM3-208ENST00000486758 LST1O00453 97 aa9.02□□□□□ -0.96
SHROOM3-208ENST00000486758 LINC00694P0DN24 101 aa9.02□□□□□ -0.96
SHROOM3-208ENST00000486758 C14orf132Q9NPU4 83 aa9.02□□□□□ -0.96
SHROOM3-208ENST00000486758 COL6A5A8TX70 2615 aa9.02□□□□□ -0.97
SHROOM3-208ENST00000486758 SMIM9A6NGZ8 99 aa9.02□□□□□ -0.97
SHROOM3-208ENST00000486758 IGLV1-40P01703 118 aa9.01□□□□□ -0.97
SHROOM3-208ENST00000486758 PF4P02776 101 aa9.01□□□□□ -0.97
SHROOM3-208ENST00000486758 NOP10Q9NPE3 64 aaKnown RBP9.01□□□□□ -0.97
SHROOM3-208ENST00000486758 hADV29S1A0JD25 119 aa9.01□□□□□ -0.97
SHROOM3-208ENST00000486758 WFDC11Q8NEX6 87 aa9.01□□□□□ -0.97
SHROOM3-208ENST00000486758 A0A1B0GX51 115 aa9.01□□□□□ -0.97
SHROOM3-208ENST00000486758 K7EMT4 169 aa9.01□□□□□ -0.97
SHROOM3-208ENST00000486758 SOCS3O14543 225 aa9.01□□□□□ -0.97
SHROOM3-208ENST00000486758 WFDC10AQ9H1F0 79 aa9.01□□□□□ -0.97
SHROOM3-208ENST00000486758 COPS9Q8WXC6 57 aa9□□□□□ -0.97
SHROOM3-208ENST00000486758 AMELXQ99217 191 aa9□□□□□ -0.97
SHROOM3-208ENST00000486758 HERVK_113P63121 156 aa9□□□□□ -0.97
SHROOM3-208ENST00000486758 RPL36AP83881 106 aaKnown RBP9□□□□□ -0.97
SHROOM3-208ENST00000486758 SBSPONQ8IVN8 264 aa9□□□□□ -0.97
SHROOM3-208ENST00000486758 LINC00308Q8TCZ7 52 aa9□□□□□ -0.97
SHROOM3-208ENST00000486758 RPL36ALQ969Q0 106 aaKnown RBP9□□□□□ -0.97
SHROOM3-208ENST00000486758 SLPIP03973 132 aa9□□□□□ -0.97
SHROOM3-208ENST00000486758 CLPSL2Q6UWE3 100 aa9□□□□□ -0.97
SHROOM3-208ENST00000486758 TRBV6-5A0A0K0K1A5 114 aa8.99□□□□□ -0.97
SHROOM3-208ENST00000486758 ESM1Q9NQ30 184 aa8.99□□□□□ -0.97
SHROOM3-208ENST00000486758 C5orf38Q86SI9 138 aa8.98□□□□□ -0.97
SHROOM3-208ENST00000486758 INAFM2P0DMQ5 153 aa8.98□□□□□ -0.97
SHROOM3-208ENST00000486758 DEFB113Q30KQ7 82 aa8.98□□□□□ -0.97
SHROOM3-208ENST00000486758 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
SHROOM3-208ENST00000486758 COX7A2LO14548 114 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 IGHV4-31P0DP07 118 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 Q8N2B8 174 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 A0A087WVE0 104 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 LECT2O14960 151 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 Q6ZSN1 163 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 C9orf85Q96MD7 179 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 MGAM2Q2M2H8 2515 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 CCL24O00175 119 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 COX6A2Q02221 97 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 SND1-IT1Q9HBX3 110 aa8.97□□□□□ -0.97
SHROOM3-208ENST00000486758 TIRAPP58753 221 aa8.96□□□□□ -0.97
SHROOM3-208ENST00000486758 LINC00643Q86TS7 51 aa8.96□□□□□ -0.97
SHROOM3-208ENST00000486758 TMEM126AQ9H061 195 aa8.96□□□□□ -0.97
SHROOM3-208ENST00000486758 MAP6D1Q9H9H5 199 aa8.96□□□□□ -0.97
SHROOM3-208ENST00000486758 F5H768 121 aa8.96□□□□□ -0.98
SHROOM3-208ENST00000486758 TRACP01848 142 aa8.96□□□□□ -0.98
SHROOM3-208ENST00000486758 MRPS36P82909 103 aaKnown RBP8.96□□□□□ -0.98
SHROOM3-208ENST00000486758 ZNF702PQ9H963 129 aa8.96□□□□□ -0.98
SHROOM3-208ENST00000486758 Q6ZTI0 123 aa8.96□□□□□ -0.98
SHROOM3-208ENST00000486758 C6orf226Q5I0X4 101 aa8.95□□□□□ -0.98
SHROOM3-208ENST00000486758 DEFB4AO15263 64 aa8.95□□□□□ -0.98
SHROOM3-208ENST00000486758 UBE2D4Q9Y2X8 147 aa8.95□□□□□ -0.98
SHROOM3-208ENST00000486758 J3QLI3 93 aa8.95□□□□□ -0.98
SHROOM3-208ENST00000486758 C3orf22Q8N5N4 141 aa8.95□□□□□ -0.98
SHROOM3-208ENST00000486758 SMR3AQ99954 134 aa8.95□□□□□ -0.98
SHROOM3-208ENST00000486758 Q6Q795 121 aa8.94□□□□□ -0.98
SHROOM3-208ENST00000486758 NCR3O14931 201 aa8.94□□□□□ -0.98
SHROOM3-208ENST00000486758 ACYP1P07311 99 aa8.94□□□□□ -0.98
SHROOM3-208ENST00000486758 TENM4Q6N022 2769 aa8.94□□□□□ -0.98
SHROOM3-208ENST00000486758 Q6YL49 198 aa8.94□□□□□ -0.98
SHROOM3-208ENST00000486758 RBMY1BA6NDE4 496 aaKnown RBP8.93□□□□□ -0.98
SHROOM3-208ENST00000486758 RBMY1EA6NEQ0 496 aaKnown RBP8.93□□□□□ -0.98
SHROOM3-208ENST00000486758 RBMY1DP0C7P1 496 aaKnown RBP8.93□□□□□ -0.98
SHROOM3-208ENST00000486758 RBMY1A1P0DJD3 496 aaKnown RBP8.93□□□□□ -0.98
SHROOM3-208ENST00000486758 RBMY1CP0DJD4 496 aa8.93□□□□□ -0.98
SHROOM3-208ENST00000486758 RBMY1FQ15415 496 aaKnown RBP8.93□□□□□ -0.98
SHROOM3-208ENST00000486758 WFDC9Q8NEX5 89 aa8.93□□□□□ -0.98
SHROOM3-208ENST00000486758 SPANXDQ9BXN6 97 aa8.93□□□□□ -0.98
SHROOM3-208ENST00000486758 SPANXCQ9NY87 97 aa8.93□□□□□ -0.98
SHROOM3-208ENST00000486758 UQCRQO14949 82 aa8.93□□□□□ -0.98
SHROOM3-208ENST00000486758 MALP21145 153 aa8.92□□□□□ -0.98
SHROOM3-208ENST00000486758 FAM19A5Q7Z5A7 132 aaPredicted RBP8.92□□□□□ -0.98
SHROOM3-208ENST00000486758 DNAJC9-AS1A6NH13 148 aa8.91□□□□□ -0.98
SHROOM3-208ENST00000486758 INAFM1C9JVW0 142 aa8.91□□□□□ -0.98
SHROOM3-208ENST00000486758 J3KT08 172 aa8.91□□□□□ -0.98
SHROOM3-208ENST00000486758 TRAV23DV6A0A075B6W5 121 aa8.91□□□□□ -0.98
SHROOM3-208ENST00000486758 TRAV13-2A0A0B4J235 113 aa8.91□□□□□ -0.98
SHROOM3-208ENST00000486758 NDUFA1O15239 70 aa8.91□□□□□ -0.98
SHROOM3-208ENST00000486758 XCL1P47992 114 aa8.91□□□□□ -0.98
SHROOM3-208ENST00000486758 DSCR8Q96T75 97 aa8.91□□□□□ -0.98
SHROOM3-208ENST00000486758 DEFB114Q30KQ6 69 aa8.9□□□□□ -0.98
SHROOM3-208ENST00000486758 DNAJC30Q96LL9 226 aa8.9□□□□□ -0.98
SHROOM3-208ENST00000486758 LITAFQ99732 161 aa8.9□□□□□ -0.98
SHROOM3-208ENST00000486758 TMEM243Q9BU79 118 aa8.9□□□□□ -0.98
SHROOM3-208ENST00000486758 CHCHD7Q9BUK0 85 aa8.9□□□□□ -0.98
SHROOM3-208ENST00000486758 RNF152Q8N8N0 203 aa8.9□□□□□ -0.99
SHROOM3-208ENST00000486758 PYGO1Q9Y3Y4 419 aa8.9□□□□□ -0.99
SHROOM3-208ENST00000486758 LOC100131303A0A0U1RQF7 123 aa8.89□□□□□ -0.99
SHROOM3-208ENST00000486758 LINC00242Q5T6M2 205 aa8.89□□□□□ -0.99
SHROOM3-208ENST00000486758 SMCR5Q8TEV8 140 aa8.89□□□□□ -0.99
SHROOM3-208ENST00000486758 FAM19A4Q96LR4 140 aa8.89□□□□□ -0.99
SHROOM3-208ENST00000486758 LAMTOR3Q9UHA4 124 aa8.89□□□□□ -0.99
SHROOM3-208ENST00000486758 ATOX1O00244 68 aa8.89□□□□□ -0.99
SHROOM3-208ENST00000486758 HAMPP81172 84 aa8.89□□□□□ -0.99
SHROOM3-208ENST00000486758 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.89□□□□□ -0.99
SHROOM3-208ENST00000486758 FAM218AQ96MZ4 157 aa8.89□□□□□ -0.99
SHROOM3-208ENST00000486758 APCP25054 2843 aa8.89□□□□□ -0.99
SHROOM3-208ENST00000486758 HIVEP1P15822 2718 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms