RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 PACRGQ96M98 296 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-229ENST00000486665 HIST1H2BLQ99880 126 aa8.5□□□□□ -1.05
HDAC6-229ENST00000486665 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
HDAC6-229ENST00000486665 A0A0J9YXV3 536 aa8.49□□□□□ -1.05
HDAC6-229ENST00000486665 GAGE12HA6NDE8 117 aa8.49□□□□□ -1.05
HDAC6-229ENST00000486665 S100A2P29034 98 aa8.49□□□□□ -1.05
HDAC6-229ENST00000486665 XCL1P47992 114 aa8.49□□□□□ -1.05
HDAC6-229ENST00000486665 COX6A2Q02221 97 aa8.49□□□□□ -1.05
HDAC6-229ENST00000486665 LINC00242Q5T6M2 205 aa8.49□□□□□ -1.05
HDAC6-229ENST00000486665 MAPKAPK5-AS1Q8N8E1 139 aa8.49□□□□□ -1.05
HDAC6-229ENST00000486665 C1orf43Q9BWL3 253 aa8.49□□□□□ -1.05
HDAC6-229ENST00000486665 LRP1BQ9NZR2 4599 aa8.49□□□□□ -1.05
HDAC6-229ENST00000486665 TRAV12-1A0A0B4J245 112 aa8.48□□□□□ -1.05
HDAC6-229ENST00000486665 H0Y8G0 127 aa8.48□□□□□ -1.05
HDAC6-229ENST00000486665 FOXI1Q12951 378 aa8.48□□□□□ -1.05
HDAC6-229ENST00000486665 FAM19A3Q7Z5A8 133 aa8.48□□□□□ -1.05
HDAC6-229ENST00000486665 SPATA12Q7Z6I5 190 aa8.48□□□□□ -1.05
HDAC6-229ENST00000486665 NFE4Q86UQ8 179 aa8.48□□□□□ -1.05
HDAC6-229ENST00000486665 RMI2Q96E14 147 aa8.48□□□□□ -1.05
HDAC6-229ENST00000486665 MAP1LC3CQ9BXW4 147 aa8.48□□□□□ -1.05
HDAC6-229ENST00000486665 C3orf79P0CE67 100 aa8.47□□□□□ -1.05
HDAC6-229ENST00000486665 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
HDAC6-229ENST00000486665 TM2D2Q9BX73 214 aa8.47□□□□□ -1.05
HDAC6-229ENST00000486665 CHTOPQ9Y3Y2 248 aaKnown RBP8.47□□□□□ -1.05
HDAC6-229ENST00000486665 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
HDAC6-229ENST00000486665 SYS1-DBNDD2H3BUS1 97 aa8.46□□□□□ -1.06
HDAC6-229ENST00000486665 KRTDAPP60985 99 aa8.46□□□□□ -1.06
HDAC6-229ENST00000486665 ODF1Q14990 250 aa8.46□□□□□ -1.06
HDAC6-229ENST00000486665 MRPL35Q9NZE8 188 aaKnown RBP8.46□□□□□ -1.06
HDAC6-229ENST00000486665 IGHV3OR16-9A0A0B4J2B5 98 aa8.45□□□□□ -1.06
HDAC6-229ENST00000486665 TINCRA0A1B0GVN0 87 aa8.45□□□□□ -1.06
HDAC6-229ENST00000486665 IGLC3P0DOY3 106 aa8.45□□□□□ -1.06
HDAC6-229ENST00000486665 C5orf38Q86SI9 138 aa8.45□□□□□ -1.06
HDAC6-229ENST00000486665 PMCHL2Q9BQD1 86 aa8.45□□□□□ -1.06
HDAC6-229ENST00000486665 COX11Q9Y6N1 276 aa8.45□□□□□ -1.06
HDAC6-229ENST00000486665 PSCAO43653 123 aa8.44□□□□□ -1.06
HDAC6-229ENST00000486665 WFDC2Q14508 124 aa8.44□□□□□ -1.06
HDAC6-229ENST00000486665 DNAH5Q8TE73 4624 aa8.44□□□□□ -1.06
HDAC6-229ENST00000486665 APOBP04114 4563 aaKnown RBP8.43□□□□□ -1.06
HDAC6-229ENST00000486665 LRCOL1A6NCL2 159 aa8.43□□□□□ -1.06
HDAC6-229ENST00000486665 C11orf86A6NJI1 115 aa8.43□□□□□ -1.06
HDAC6-229ENST00000486665 F8VRH5 84 aa8.43□□□□□ -1.06
HDAC6-229ENST00000486665 HERVK_113P63121 156 aa8.43□□□□□ -1.06
HDAC6-229ENST00000486665 PET117Q6UWS5 81 aa8.43□□□□□ -1.06
HDAC6-229ENST00000486665 GEMIN7Q9H840 131 aaKnown RBP8.43□□□□□ -1.06
HDAC6-229ENST00000486665 CDKN2A-AS1Q9UH64 79 aa8.43□□□□□ -1.06
HDAC6-229ENST00000486665 COX7A2LO14548 114 aa8.42□□□□□ -1.06
HDAC6-229ENST00000486665 LECT2O14960 151 aa8.42□□□□□ -1.06
HDAC6-229ENST00000486665 SEC11AP67812 179 aa8.42□□□□□ -1.06
HDAC6-229ENST00000486665 TNP2Q05952 138 aa8.42□□□□□ -1.06
HDAC6-229ENST00000486665 LINC01545Q5VT33 79 aa8.42□□□□□ -1.06
HDAC6-229ENST00000486665 OR10D4PQ8NGN7 298 aa8.42□□□□□ -1.06
HDAC6-229ENST00000486665 CHAC1Q9BUX1 264 aa8.42□□□□□ -1.06
HDAC6-229ENST00000486665 IGLV5-45A0A087WSX0 123 aa8.41□□□□□ -1.06
HDAC6-229ENST00000486665 A0A087WZ39 114 aa8.41□□□□□ -1.06
HDAC6-229ENST00000486665 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-229ENST00000486665 LINC00469Q8N7U9 141 aa8.41□□□□□ -1.06
HDAC6-229ENST00000486665 USP17L23D6RBM5 183 aa8.4□□□□□ -1.06
HDAC6-229ENST00000486665 C15orf56Q8N910 161 aa8.4□□□□□ -1.06
HDAC6-229ENST00000486665 A0A087WTM6 91 aa8.39□□□□□ -1.07
HDAC6-229ENST00000486665 DPM2O94777 84 aa8.39□□□□□ -1.07
HDAC6-229ENST00000486665 IGKCP01834 107 aa8.39□□□□□ -1.07
HDAC6-229ENST00000486665 MALP21145 153 aa8.39□□□□□ -1.07
HDAC6-229ENST00000486665 DNAH8Q96JB1 4490 aa8.39□□□□□ -1.07
HDAC6-229ENST00000486665 IGHV3-64A0A075B6Q5 118 aa8.38□□□□□ -1.07
HDAC6-229ENST00000486665 IGHV1-58A0A0C4DH39 117 aa8.38□□□□□ -1.07
HDAC6-229ENST00000486665 SPINK8P0C7L1 97 aa8.38□□□□□ -1.07
HDAC6-229ENST00000486665 TMEM170BQ5T4T1 132 aa8.38□□□□□ -1.07
HDAC6-229ENST00000486665 LINC01561Q8N1V8 128 aa8.38□□□□□ -1.07
HDAC6-229ENST00000486665 SMIM1B2RUZ4 78 aa8.37□□□□□ -1.07
HDAC6-229ENST00000486665 PLNP26678 52 aa8.37□□□□□ -1.07
HDAC6-229ENST00000486665 HIGD2BQ4VC39 106 aa8.37□□□□□ -1.07
HDAC6-229ENST00000486665 CFAP161Q6P656 301 aa8.37□□□□□ -1.07
HDAC6-229ENST00000486665 LINC00526Q96FQ7 95 aa8.37□□□□□ -1.07
HDAC6-229ENST00000486665 TMEM223A0PJW6 202 aa8.36□□□□□ -1.07
HDAC6-229ENST00000486665 C20orf202A1L168 122 aa8.36□□□□□ -1.07
HDAC6-229ENST00000486665 H3BRM9 83 aa8.36□□□□□ -1.07
HDAC6-229ENST00000486665 ORAOV1Q8WV07 137 aa8.36□□□□□ -1.07
HDAC6-229ENST00000486665 GVQW2A0A096LPI5 108 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-229ENST00000486665 APOMO95445 188 aa8.35□□□□□ -1.07
HDAC6-229ENST00000486665 SCGB1D1O95968 90 aa8.35□□□□□ -1.07
HDAC6-229ENST00000486665 KIAA0087Q14695 138 aa8.35□□□□□ -1.07
HDAC6-229ENST00000486665 ATOH7Q8N100 152 aa8.35□□□□□ -1.07
HDAC6-229ENST00000486665 Q8N814 137 aa8.35□□□□□ -1.07
HDAC6-229ENST00000486665 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.07
HDAC6-229ENST00000486665 hDV102S1A0JD36 115 aa8.34□□□□□ -1.07
HDAC6-229ENST00000486665 SLPIP03973 132 aa8.34□□□□□ -1.07
HDAC6-229ENST00000486665 FUSP35637 526 aaKnown RBP eCLIP8.34□□□□□ -1.07
HDAC6-229ENST00000486665 SPAG11BQ08648 103 aa8.34□□□□□ -1.07
HDAC6-229ENST00000486665 STPG4Q8N801 248 aa8.34□□□□□ -1.07
HDAC6-229ENST00000486665 C16orf90A8MZG2 172 aa8.33□□□□□ -1.08
HDAC6-229ENST00000486665 NTN5Q8WTR8 489 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-229ENST00000486665 TOMM7Q9P0U1 55 aa8.33□□□□□ -1.08
HDAC6-229ENST00000486665 HERC1Q15751 4861 aa8.32□□□□□ -1.08
HDAC6-229ENST00000486665 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-229ENST00000486665 ZNF561-AS1K7EIQ3 104 aa8.32□□□□□ -1.08
HDAC6-229ENST00000486665 JOSD1Q15040 202 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-229ENST00000486665 C14orf177Q52M58 125 aa8.32□□□□□ -1.08
HDAC6-229ENST00000486665 LOC105371267A0A1B0GV96 52 aa8.31□□□□□ -1.08
HDAC6-229ENST00000486665 EREGO14944 169 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms