RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 KANTRA0A1W2PQU2 76 aa4.73□□□□□ -1.65
HDAC3-209ENST00000486618 I3L2K1 104 aa4.73□□□□□ -1.65
HDAC3-209ENST00000486618 K7EQG2 157 aa4.73□□□□□ -1.65
HDAC3-209ENST00000486618 IGKV1-5P01602 117 aa4.73□□□□□ -1.65
HDAC3-209ENST00000486618 PRSS2P07478 247 aa4.73□□□□□ -1.65
HDAC3-209ENST00000486618 ZNF688P0C7X2 276 aa4.73□□□□□ -1.65
HDAC3-209ENST00000486618 PTHLHP12272 177 aa4.73□□□□□ -1.65
HDAC3-209ENST00000486618 ATP5EP56381 51 aaPredicted RBP4.73□□□□□ -1.65
HDAC3-209ENST00000486618 LSM3P62310 102 aaKnown RBP4.73□□□□□ -1.65
HDAC3-209ENST00000486618 ORMDL2Q53FV1 153 aa4.73□□□□□ -1.65
HDAC3-209ENST00000486618 PCP2Q8IVA1 136 aa4.73□□□□□ -1.65
HDAC3-209ENST00000486618 TP73-AS1Q9UF72 201 aa4.73□□□□□ -1.65
HDAC3-209ENST00000486618 HSPG2P98160 4391 aa4.72□□□□□ -1.65
HDAC3-209ENST00000486618 PLA2G10O15496 165 aa4.72□□□□□ -1.65
HDAC3-209ENST00000486618 IGHV3-48P01763 117 aa4.72□□□□□ -1.65
HDAC3-209ENST00000486618 HBDP02042 147 aa4.72□□□□□ -1.65
HDAC3-209ENST00000486618 ELK1P19419 428 aa4.72□□□□□ -1.65
HDAC3-209ENST00000486618 VSIG2Q96IQ7 327 aa4.72□□□□□ -1.65
HDAC3-209ENST00000486618 IGHV1OR15-1A0A075B7D0 117 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 NBDYA0A0U1RRE5 68 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 MUC21A0A140T8X8 626 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 CEBPZOSA8MTT3 80 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 A8MWL6 223 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 C17orf112F2Z3M2 114 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 ATOX1O00244 68 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 HTN3P15516 51 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 CCL20P78556 96 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 PRCDQ00LT1 54 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 TWIST1Q15672 202 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 PSMG4Q5JS54 123 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 URB1-AS1Q96HZ7 61 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 SLC25A2Q9BXI2 301 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 V9GYH0 126 aa4.71□□□□□ -1.66
HDAC3-209ENST00000486618 SYS1-DBNDD2H3BUS1 97 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 H3BUT2 72 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 K7EQD1 137 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 LTAP01374 205 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 IL5P05113 134 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 INAFM2P0DMQ5 153 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 FAUP35544 74 aaKnown RBP4.7□□□□□ -1.66
HDAC3-209ENST00000486618 HERVK_113P61574 105 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 MPV17L2Q567V2 206 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 SPINK9Q5DT21 86 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 SCXQ7RTU7 201 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 SPATA12Q7Z6I5 190 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 AMN1Q8IY45 258 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 PRSS3P2Q8NHM4 247 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 FAM213BQ8TBF2 198 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 C18orf32Q8TCD1 76 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 DSCR8Q96T75 97 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 CHAC1Q9BUX1 264 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 ZNF492Q9P255 531 aa4.7□□□□□ -1.66
HDAC3-209ENST00000486618 PIGBOS1A0A0B4J2F0 54 aa4.69□□□□□ -1.66
HDAC3-209ENST00000486618 H3BMM0 161 aa4.69□□□□□ -1.66
HDAC3-209ENST00000486618 K7ERJ3 54 aa4.69□□□□□ -1.66
HDAC3-209ENST00000486618 ETDBQ3ZM63 59 aa4.69□□□□□ -1.66
HDAC3-209ENST00000486618 C7orf65Q6ZTY9 151 aa4.69□□□□□ -1.66
HDAC3-209ENST00000486618 MGST2Q99735 147 aa4.69□□□□□ -1.66
HDAC3-209ENST00000486618 EPDR1Q9UM22 224 aa4.69□□□□□ -1.66
HDAC3-209ENST00000486618 UBE2L5PA0A1B0GUS4 154 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 A0A1B0GW54 56 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 UMAD1C9J7I0 102 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 ZNF253O75346 499 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 TCL1BO95988 128 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 IGKCP01834 107 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 PRM2P04554 102 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 IL4P05112 153 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 CCL18P55774 89 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 UBE2L3P68036 154 aaKnown RBP4.68□□□□□ -1.66
HDAC3-209ENST00000486618 ZNF876PQ49A33 203 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 CMTM2Q8TAZ6 248 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 TSKUQ8WUA8 353 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 OPRPNQ99935 248 aaPredicted RBP4.68□□□□□ -1.66
HDAC3-209ENST00000486618 FXYD6Q9H0Q3 95 aa4.68□□□□□ -1.66
HDAC3-209ENST00000486618 FLG2Q5D862 2391 aaPredicted RBP4.68□□□□□ -1.66
HDAC3-209ENST00000486618 HERC1Q15751 4861 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 IGLV5-52A0A0A0MRZ9 124 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.67□□□□□ -1.66
HDAC3-209ENST00000486618 NAP1L6A6NFF2 107 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 C9JCJ5 164 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 INS-IGF2F8WCM5 200 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 TSHBP01222 138 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 IGKV3-20P01619 116 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 ZNF79Q15937 498 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 LINC01554Q52M75 96 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 LINC00479Q96M42 142 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 DPH3P1Q9H4G8 78 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 IL36BQ9NZH7 164 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 LINC00588Q9Y4M8 146 aa4.67□□□□□ -1.66
HDAC3-209ENST00000486618 IGHV3-38A0A0C4DH36 116 aa4.66□□□□□ -1.66
HDAC3-209ENST00000486618 UBE2AP49459 152 aa4.66□□□□□ -1.66
HDAC3-209ENST00000486618 REG3AQ06141 175 aa4.66□□□□□ -1.66
HDAC3-209ENST00000486618 TMEM252Q8N6L7 170 aa4.66□□□□□ -1.66
HDAC3-209ENST00000486618 CHCHD5Q9BSY4 110 aa4.66□□□□□ -1.66
HDAC3-209ENST00000486618 NPCDR1Q9BY65 106 aa4.66□□□□□ -1.66
HDAC3-209ENST00000486618 HHLA3Q9XRX5 114 aa4.66□□□□□ -1.66
HDAC3-209ENST00000486618 SRRM2Q9UQ35 2752 aaKnown RBP4.65□□□□□ -1.66
HDAC3-209ENST00000486618 LRP1BQ9NZR2 4599 aa4.65□□□□□ -1.66
HDAC3-209ENST00000486618 IGLV5-37A0A075B6J1 123 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 SNRPGP15A8MWD9 76 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms