RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 IGHV1-58A0A0C4DH39 117 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 A0A0J9YXY3 114 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 H3BMM0 161 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 CIDEAO60543 219 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 TSPEAR-AS2P59090 65 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 DEFB131AP59861 70 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 CIRBPQ14011 172 aaKnown RBP6.48□□□□□ -1.37
COL12A1-208ENST00000486533 SH2D6Q7Z4S9 175 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 GTSF1LQ9H1H1 148 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 GEMIN7Q9H840 131 aaKnown RBP6.48□□□□□ -1.37
COL12A1-208ENST00000486533 A0A0J9YXV3 536 aa6.47□□□□□ -1.37
COL12A1-208ENST00000486533 A4D1N5 150 aa6.47□□□□□ -1.37
COL12A1-208ENST00000486533 IGHV3-33P01772 117 aa6.47□□□□□ -1.37
COL12A1-208ENST00000486533 RYR2Q92736 4967 aa6.46□□□□□ -1.37
COL12A1-208ENST00000486533 TRBV30A0A0K0K1B3 111 aa6.46□□□□□ -1.38
COL12A1-208ENST00000486533 LCE6AA0A183 80 aa6.46□□□□□ -1.38
COL12A1-208ENST00000486533 TCL1BO95988 128 aa6.46□□□□□ -1.38
COL12A1-208ENST00000486533 IGHV3-53P01767 116 aa6.46□□□□□ -1.38
COL12A1-208ENST00000486533 IGHV3-30-3P0DP02 117 aa6.46□□□□□ -1.38
COL12A1-208ENST00000486533 DGAT2L7PQ6IED9 249 aa6.46□□□□□ -1.38
COL12A1-208ENST00000486533 IL17DQ8TAD2 202 aa6.46□□□□□ -1.38
COL12A1-208ENST00000486533 TMEM263Q8WUH6 116 aaKnown RBP6.46□□□□□ -1.38
COL12A1-208ENST00000486533 RS1O15537 224 aa6.45□□□□□ -1.38
COL12A1-208ENST00000486533 SLC25A20O43772 301 aa6.45□□□□□ -1.38
COL12A1-208ENST00000486533 TIRAPP58753 221 aa6.45□□□□□ -1.38
COL12A1-208ENST00000486533 MIAQ16674 131 aa6.45□□□□□ -1.38
COL12A1-208ENST00000486533 LINC01600Q96MT4 127 aa6.45□□□□□ -1.38
COL12A1-208ENST00000486533 LINC01587Q99440 93 aa6.45□□□□□ -1.38
COL12A1-208ENST00000486533 LYSTQ99698 3801 aa6.45□□□□□ -1.38
COL12A1-208ENST00000486533 NDUFA12Q9UI09 145 aa6.45□□□□□ -1.38
COL12A1-208ENST00000486533 TRBV10-1A0A0K0K1A3 114 aa6.44□□□□□ -1.38
COL12A1-208ENST00000486533 KNCNA6PVL3 124 aa6.44□□□□□ -1.38
COL12A1-208ENST00000486533 HERVK_113P63121 156 aa6.44□□□□□ -1.38
COL12A1-208ENST00000486533 MUSTN1Q8IVN3 82 aa6.44□□□□□ -1.38
COL12A1-208ENST00000486533 VSIG2Q96IQ7 327 aa6.44□□□□□ -1.38
COL12A1-208ENST00000486533 MAP6D1Q9H9H5 199 aa6.44□□□□□ -1.38
COL12A1-208ENST00000486533 SACSQ9NZJ4 4579 aa6.44□□□□□ -1.38
COL12A1-208ENST00000486533 H3BT86 120 aa6.44□□□□□ -1.38
COL12A1-208ENST00000486533 APOC4P55056 127 aa6.44□□□□□ -1.38
COL12A1-208ENST00000486533 OVOL2Q9BRP0 275 aa6.44□□□□□ -1.38
COL12A1-208ENST00000486533 UBE2D4Q9Y2X8 147 aa6.44□□□□□ -1.38
COL12A1-208ENST00000486533 DYNC2H1Q8NCM8 4307 aaKnown RBP6.43□□□□□ -1.38
COL12A1-208ENST00000486533 C9JAW5 83 aa6.43□□□□□ -1.38
COL12A1-208ENST00000486533 HTN1P15515 57 aa6.43□□□□□ -1.38
COL12A1-208ENST00000486533 RPL36AP83881 106 aaKnown RBP6.43□□□□□ -1.38
COL12A1-208ENST00000486533 DEFB135Q30KP9 77 aa6.43□□□□□ -1.38
COL12A1-208ENST00000486533 ODF3L2Q3SX64 289 aa6.43□□□□□ -1.38
COL12A1-208ENST00000486533 STHQ8IWL8 128 aa6.43□□□□□ -1.38
COL12A1-208ENST00000486533 ANKRD29Q8N6D5 301 aa6.43□□□□□ -1.38
COL12A1-208ENST00000486533 RPL36ALQ969Q0 106 aaKnown RBP6.43□□□□□ -1.38
COL12A1-208ENST00000486533 OPRPNQ99935 248 aaPredicted RBP6.43□□□□□ -1.38
COL12A1-208ENST00000486533 PPDPFQ9H3Y8 114 aa6.43□□□□□ -1.38
COL12A1-208ENST00000486533 IGHV3-64A0A075B6Q5 118 aa6.42□□□□□ -1.38
COL12A1-208ENST00000486533 IGLV5-45A0A087WSX0 123 aa6.42□□□□□ -1.38
COL12A1-208ENST00000486533 TRBV10-2A0A0K0K1G8 114 aa6.42□□□□□ -1.38
COL12A1-208ENST00000486533 NDUFA1O15239 70 aa6.42□□□□□ -1.38
COL12A1-208ENST00000486533 PRSS2P07478 247 aa6.42□□□□□ -1.38
COL12A1-208ENST00000486533 RPL35AP18077 110 aaKnown RBP6.42□□□□□ -1.38
COL12A1-208ENST00000486533 DAZ2Q13117 558 aaKnown RBP6.42□□□□□ -1.38
COL12A1-208ENST00000486533 LINC01620Q4KN68 170 aa6.42□□□□□ -1.38
COL12A1-208ENST00000486533 DAZ4Q86SG3 579 aaKnown RBP6.42□□□□□ -1.38
COL12A1-208ENST00000486533 CHCHD7Q9BUK0 85 aa6.42□□□□□ -1.38
COL12A1-208ENST00000486533 DAZ3Q9NR90 486 aaKnown RBP6.42□□□□□ -1.38
COL12A1-208ENST00000486533 CSDC2Q9Y534 153 aaKnown RBP6.42□□□□□ -1.38
COL12A1-208ENST00000486533 SPINK8P0C7L1 97 aa6.41□□□□□ -1.38
COL12A1-208ENST00000486533 RPL13AP40429 203 aaKnown RBP6.41□□□□□ -1.38
COL12A1-208ENST00000486533 HERV-K104P63124 156 aa6.41□□□□□ -1.38
COL12A1-208ENST00000486533 SFTA2Q6UW10 78 aa6.41□□□□□ -1.38
COL12A1-208ENST00000486533 FAM19A3Q7Z5A8 133 aa6.41□□□□□ -1.38
COL12A1-208ENST00000486533 ICOSQ9Y6W8 199 aa6.41□□□□□ -1.38
COL12A1-208ENST00000486533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.41□□□□□ -1.38
COL12A1-208ENST00000486533 IGHV3-73A0A0B4J1V6 119 aa6.4□□□□□ -1.38
COL12A1-208ENST00000486533 A0A0J9YWU9 116 aa6.4□□□□□ -1.38
COL12A1-208ENST00000486533 H7C423 109 aa6.4□□□□□ -1.38
COL12A1-208ENST00000486533 RBMY1A1P0DJD3 496 aaKnown RBP6.4□□□□□ -1.38
COL12A1-208ENST00000486533 RBMY1CP0DJD4 496 aa6.4□□□□□ -1.38
COL12A1-208ENST00000486533 CKS1BP61024 79 aa6.4□□□□□ -1.38
COL12A1-208ENST00000486533 RBMY1FQ15415 496 aaKnown RBP6.4□□□□□ -1.38
COL12A1-208ENST00000486533 MRPL23Q16540 153 aaKnown RBP6.4□□□□□ -1.38
COL12A1-208ENST00000486533 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
COL12A1-208ENST00000486533 Q6ZUT4 128 aa6.4□□□□□ -1.38
COL12A1-208ENST00000486533 C11orf72Q8NBR9 251 aa6.4□□□□□ -1.38
COL12A1-208ENST00000486533 KIR2DL5BQ8NHK3 375 aa6.4□□□□□ -1.38
COL12A1-208ENST00000486533 UBE2WQ96B02 151 aa6.4□□□□□ -1.38
COL12A1-208ENST00000486533 TMEM101Q96IK0 257 aa6.4□□□□□ -1.38
COL12A1-208ENST00000486533 TRAV4A0A0B4J268 109 aa6.4□□□□□ -1.39
COL12A1-208ENST00000486533 H7C2G1 150 aa6.4□□□□□ -1.39
COL12A1-208ENST00000486533 K7EQD1 137 aa6.4□□□□□ -1.39
COL12A1-208ENST00000486533 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.39□□□□□ -1.39
COL12A1-208ENST00000486533 TRAV8-4A0A0B4J246 113 aa6.39□□□□□ -1.39
COL12A1-208ENST00000486533 IGKV2-29A2NJV5 120 aaPredicted RBP6.39□□□□□ -1.39
COL12A1-208ENST00000486533 SNCGO76070 127 aa6.39□□□□□ -1.39
COL12A1-208ENST00000486533 C2orf82Q6UX34 121 aa6.39□□□□□ -1.39
COL12A1-208ENST00000486533 DEFB104AQ8WTQ1 72 aa6.39□□□□□ -1.39
COL12A1-208ENST00000486533 LITAFQ99732 161 aa6.39□□□□□ -1.39
COL12A1-208ENST00000486533 CDIP1Q9H305 208 aa6.39□□□□□ -1.39
COL12A1-208ENST00000486533 UBE2L6O14933 153 aa6.38□□□□□ -1.39
COL12A1-208ENST00000486533 TRIAP1O43715 76 aa6.38□□□□□ -1.39
COL12A1-208ENST00000486533 CARD19Q96LW7 228 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms