RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 TAGLN2P37802 199 aaKnown RBP11.31□□□□□ -0.6
CHRD-216ENST00000486066 SUMO2P61956 95 aaKnown RBP11.31□□□□□ -0.6
CHRD-216ENST00000486066 GAGE2EQ4V326 116 aa11.31□□□□□ -0.6
CHRD-216ENST00000486066 GAGE2DQ9UEU5 116 aa11.31□□□□□ -0.6
CHRD-216ENST00000486066 FSIP2Q5CZC0 6907 aa11.3□□□□□ -0.6
CHRD-216ENST00000486066 UBE2BP63146 152 aa11.3□□□□□ -0.6
CHRD-216ENST00000486066 HIGD1CA8MV81 97 aa11.29□□□□□ -0.6
CHRD-216ENST00000486066 KIR2DL4Q99706 377 aa11.28□□□□□ -0.6
CHRD-216ENST00000486066 NDUFC2-KCTD14E9PQ53 114 aa11.26□□□□□ -0.61
CHRD-216ENST00000486066 TMEM250H0YL14 139 aa11.26□□□□□ -0.61
CHRD-216ENST00000486066 PPP1R17O96001 155 aa11.26□□□□□ -0.61
CHRD-216ENST00000486066 RPL39P62891 51 aaKnown RBP11.26□□□□□ -0.61
CHRD-216ENST00000486066 MRPS36P82909 103 aaKnown RBP11.26□□□□□ -0.61
CHRD-216ENST00000486066 TRBV30A0A0K0K1B3 111 aa11.25□□□□□ -0.61
CHRD-216ENST00000486066 RPL32P62910 135 aaKnown RBP11.25□□□□□ -0.61
CHRD-216ENST00000486066 RGS21Q2M5E4 152 aa11.25□□□□□ -0.61
CHRD-216ENST00000486066 BORCS7Q96B45 105 aa11.25□□□□□ -0.61
CHRD-216ENST00000486066 PPP1R2P9O14990 202 aa11.24□□□□□ -0.61
CHRD-216ENST00000486066 NUPR1O60356 82 aa11.24□□□□□ -0.61
CHRD-216ENST00000486066 TMEM18Q96B42 140 aa11.24□□□□□ -0.61
CHRD-216ENST00000486066 TRBV24-1A0A075B6N3 115 aa11.23□□□□□ -0.61
CHRD-216ENST00000486066 TPRXLQ17RH7 258 aa11.23□□□□□ -0.61
CHRD-216ENST00000486066 C2orf82Q6UX34 121 aa11.22□□□□□ -0.61
CHRD-216ENST00000486066 SPANXA1Q9NS26 97 aa11.22□□□□□ -0.61
CHRD-216ENST00000486066 MRPL51Q4U2R6 128 aaKnown RBP11.21□□□□□ -0.61
CHRD-216ENST00000486066 LCE2DQ5TA82 110 aaPredicted RBP11.21□□□□□ -0.61
CHRD-216ENST00000486066 LINC01551Q86U37 167 aa11.21□□□□□ -0.61
CHRD-216ENST00000486066 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
CHRD-216ENST00000486066 BATF3Q9NR55 127 aa11.21□□□□□ -0.61
CHRD-216ENST00000486066 KRTAP13-2Q52LG2 175 aa11.2□□□□□ -0.62
CHRD-216ENST00000486066 OSTCQ9NRP0 149 aa11.2□□□□□ -0.62
CHRD-216ENST00000486066 CRYGAP11844 174 aa11.19□□□□□ -0.62
CHRD-216ENST00000486066 HBBP68871 147 aa11.19□□□□□ -0.62
CHRD-216ENST00000486066 LINC00242Q5T6M2 205 aa11.19□□□□□ -0.62
CHRD-216ENST00000486066 FAM104BQ5XKR9 115 aa11.19□□□□□ -0.62
CHRD-216ENST00000486066 TYMSOSQ8TAI1 123 aa11.19□□□□□ -0.62
CHRD-216ENST00000486066 CTDSP1Q9GZU7 261 aa11.19□□□□□ -0.62
CHRD-216ENST00000486066 C22orf24Q9Y442 160 aa11.19□□□□□ -0.62
CHRD-216ENST00000486066 IFITM10A6NMD0 228 aa11.18□□□□□ -0.62
CHRD-216ENST00000486066 RETNLBQ9BQ08 111 aa11.18□□□□□ -0.62
CHRD-216ENST00000486066 V9GYV3 84 aa11.18□□□□□ -0.62
CHRD-216ENST00000486066 TCAPO15273 167 aa11.17□□□□□ -0.62
CHRD-216ENST00000486066 RIGQ13278 110 aa11.17□□□□□ -0.62
CHRD-216ENST00000486066 TGIF2-C20orf24A0A0A6YYL0 155 aa11.16□□□□□ -0.62
CHRD-216ENST00000486066 LINC00862A6NCI5 91 aa11.16□□□□□ -0.62
CHRD-216ENST00000486066 SMIM2Q9BVW6 85 aa11.16□□□□□ -0.62
CHRD-216ENST00000486066 SLC51BQ86UW2 128 aa11.15□□□□□ -0.62
CHRD-216ENST00000486066 LINC01561Q8N1V8 128 aa11.15□□□□□ -0.62
CHRD-216ENST00000486066 BCE1O60756 84 aa11.14□□□□□ -0.63
CHRD-216ENST00000486066 KRTAP13-1Q8IUC0 172 aa11.14□□□□□ -0.63
CHRD-216ENST00000486066 TP73-AS1Q9UF72 201 aa11.14□□□□□ -0.63
CHRD-216ENST00000486066 ZNF727A8MUV8 499 aa11.13□□□□□ -0.63
CHRD-216ENST00000486066 TNFRSF6BO95407 300 aa11.13□□□□□ -0.63
CHRD-216ENST00000486066 RPL28P46779 137 aaKnown RBP11.13□□□□□ -0.63
CHRD-216ENST00000486066 PACRGQ96M98 296 aaPredicted RBP11.13□□□□□ -0.63
CHRD-216ENST00000486066 CDIP1Q9H305 208 aa11.13□□□□□ -0.63
CHRD-216ENST00000486066 ANAPC11Q9NYG5 84 aa11.13□□□□□ -0.63
CHRD-216ENST00000486066 PYGO1Q9Y3Y4 419 aa11.13□□□□□ -0.63
CHRD-216ENST00000486066 IGLV4-3A0A075B6K6 122 aa11.12□□□□□ -0.63
CHRD-216ENST00000486066 LBHQ53QV2 105 aaPredicted RBP11.12□□□□□ -0.63
CHRD-216ENST00000486066 SMIM7Q9BQ49 75 aa11.12□□□□□ -0.63
CHRD-216ENST00000486066 CRCT1Q9UGL9 99 aa11.12□□□□□ -0.63
CHRD-216ENST00000486066 CTAG1AP78358 180 aa11.1□□□□□ -0.63
CHRD-216ENST00000486066 MRPL55Q7Z7F7 128 aaKnown RBP11.1□□□□□ -0.63
CHRD-216ENST00000486066 LINC00469Q8N7U9 141 aa11.1□□□□□ -0.63
CHRD-216ENST00000486066 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
CHRD-216ENST00000486066 IGLV7-46A0A075B6I9 117 aa11.09□□□□□ -0.63
CHRD-216ENST00000486066 CKS2P33552 79 aa11.09□□□□□ -0.63
CHRD-216ENST00000486066 FAM229BQ4G0N7 80 aa11.09□□□□□ -0.63
CHRD-216ENST00000486066 FAM74A3Q4VXF1 159 aa11.09□□□□□ -0.63
CHRD-216ENST00000486066 LINC00304Q8N9R0 145 aa11.09□□□□□ -0.63
CHRD-216ENST00000486066 NAT8BQ9UHF3 227 aa11.09□□□□□ -0.63
CHRD-216ENST00000486066 NPYP01303 97 aa11.08□□□□□ -0.64
CHRD-216ENST00000486066 CEBPGP53567 150 aa11.08□□□□□ -0.64
CHRD-216ENST00000486066 SMIM27A0A1W2PRY6 76 aa11.07□□□□□ -0.64
CHRD-216ENST00000486066 D6R8Y8 96 aa11.07□□□□□ -0.64
CHRD-216ENST00000486066 IFI27P40305 119 aaPredicted RBP11.07□□□□□ -0.64
CHRD-216ENST00000486066 LINC00173Q6ZV60 143 aa11.07□□□□□ -0.64
CHRD-216ENST00000486066 TMEM141Q96I45 108 aa11.06□□□□□ -0.64
CHRD-216ENST00000486066 FAM19A3Q7Z5A8 133 aa11.05□□□□□ -0.64
CHRD-216ENST00000486066 Q8IZM0 81 aa11.05□□□□□ -0.64
CHRD-216ENST00000486066 TCTE3Q8IZS6 198 aa11.05□□□□□ -0.64
CHRD-216ENST00000486066 LINC00167Q96N53 147 aa11.05□□□□□ -0.64
CHRD-216ENST00000486066 EIF5A2Q9GZV4 153 aaKnown RBP11.05□□□□□ -0.64
CHRD-216ENST00000486066 A0A1B0GW15 77 aa11.04□□□□□ -0.64
CHRD-216ENST00000486066 SRP19P09132 144 aaKnown RBP11.04□□□□□ -0.64
CHRD-216ENST00000486066 BLOC1S1P78537 153 aa11.04□□□□□ -0.64
CHRD-216ENST00000486066 AMELXQ99217 191 aa11.04□□□□□ -0.64
CHRD-216ENST00000486066 Q6ZN92 141 aa11.03□□□□□ -0.64
CHRD-216ENST00000486066 A0A1B0GXF2 115 aa11.02□□□□□ -0.65
CHRD-216ENST00000486066 ZC2HC1BQ5TFG8 222 aa11.02□□□□□ -0.65
CHRD-216ENST00000486066 KRTAP4-1Q9BYQ7 146 aa11.02□□□□□ -0.65
CHRD-216ENST00000486066 CKS1BP61024 79 aa11.01□□□□□ -0.65
CHRD-216ENST00000486066 RPL23P62829 140 aaKnown RBP11.01□□□□□ -0.65
CHRD-216ENST00000486066 TEX43Q6ZNM6 134 aa11.01□□□□□ -0.65
CHRD-216ENST00000486066 PPDPFQ9H3Y8 114 aa11.01□□□□□ -0.65
CHRD-216ENST00000486066 IGLV5-37A0A075B6J1 123 aa11□□□□□ -0.65
CHRD-216ENST00000486066 RPL37AP8A6NKH3 93 aa11□□□□□ -0.65
CHRD-216ENST00000486066 PRSS47A8MTI9 375 aa11□□□□□ -0.65
CHRD-216ENST00000486066 PPBPP02775 128 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms