RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 NPSP0C0P6 89 aa7.74□□□□□ -1.17
HLA-DOA-204ENST00000485901 MALP21145 153 aa7.74□□□□□ -1.17
HLA-DOA-204ENST00000485901 HIGD2BQ4VC39 106 aa7.74□□□□□ -1.17
HLA-DOA-204ENST00000485901 TMEM141Q96I45 108 aa7.74□□□□□ -1.17
HLA-DOA-204ENST00000485901 VCX2Q9H322 139 aa7.74□□□□□ -1.17
HLA-DOA-204ENST00000485901 IGLV4-3A0A075B6K6 122 aa7.73□□□□□ -1.17
HLA-DOA-204ENST00000485901 IFITM10A6NMD0 228 aa7.73□□□□□ -1.17
HLA-DOA-204ENST00000485901 SLPIP03973 132 aa7.73□□□□□ -1.17
HLA-DOA-204ENST00000485901 Q6ZN92 141 aa7.73□□□□□ -1.17
HLA-DOA-204ENST00000485901 TEX43Q6ZNM6 134 aa7.73□□□□□ -1.17
HLA-DOA-204ENST00000485901 SMCO4Q9NRQ5 59 aa7.73□□□□□ -1.17
HLA-DOA-204ENST00000485901 LRP1Q07954 4544 aaKnown RBP7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 IGHV3-64A0A075B6Q5 118 aa7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 LINC01546A6NGU7 62 aa7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 LINC01549A6NIU2 74 aa7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 IGIPA6NJ69 53 aa7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 ZNF561-AS1K7EIQ3 104 aa7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 APOMO95445 188 aa7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 HAMPP81172 84 aa7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 PAPPA-AS1Q5QFB9 102 aa7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 SDIM1Q6ZPB5 146 aa7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 FA2HQ7L5A8 372 aa7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 C2orf88Q9BSF0 95 aa7.72□□□□□ -1.17
HLA-DOA-204ENST00000485901 C5orf38Q86SI9 138 aa7.71□□□□□ -1.18
HLA-DOA-204ENST00000485901 TOMM6Q96B49 74 aa7.71□□□□□ -1.18
HLA-DOA-204ENST00000485901 YPEL4Q96NS1 127 aa7.71□□□□□ -1.18
HLA-DOA-204ENST00000485901 CHAC1Q9BUX1 264 aa7.71□□□□□ -1.18
HLA-DOA-204ENST00000485901 IGHV3OR16-9A0A0B4J2B5 98 aa7.7□□□□□ -1.18
HLA-DOA-204ENST00000485901 ERASQ7Z444 233 aa7.7□□□□□ -1.18
HLA-DOA-204ENST00000485901 SCGB3A1Q96QR1 104 aa7.7□□□□□ -1.18
HLA-DOA-204ENST00000485901 AMELXQ99217 191 aa7.7□□□□□ -1.18
HLA-DOA-204ENST00000485901 TIMM17AQ99595 171 aa7.7□□□□□ -1.18
HLA-DOA-204ENST00000485901 LINC00614P0C842 121 aa7.69□□□□□ -1.18
HLA-DOA-204ENST00000485901 LINC00242Q5T6M2 205 aa7.69□□□□□ -1.18
HLA-DOA-204ENST00000485901 HMCN2Q8NDA2 5059 aa7.69□□□□□ -1.18
HLA-DOA-204ENST00000485901 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
HLA-DOA-204ENST00000485901 UBE2D1P51668 147 aa7.68□□□□□ -1.18
HLA-DOA-204ENST00000485901 KRTAP10-4P60372 401 aaPredicted RBP7.68□□□□□ -1.18
HLA-DOA-204ENST00000485901 RAB5BP61020 215 aa7.68□□□□□ -1.18
HLA-DOA-204ENST00000485901 SYCNQ0VAF6 134 aa7.68□□□□□ -1.18
HLA-DOA-204ENST00000485901 SCXQ7RTU7 201 aa7.68□□□□□ -1.18
HLA-DOA-204ENST00000485901 CBLN2Q8IUK8 224 aa7.68□□□□□ -1.18
HLA-DOA-204ENST00000485901 CIRBP-AS1Q8TBR5 109 aa7.68□□□□□ -1.18
HLA-DOA-204ENST00000485901 C18orf32Q8TCD1 76 aa7.68□□□□□ -1.18
HLA-DOA-204ENST00000485901 LINC00526Q96FQ7 95 aa7.68□□□□□ -1.18
HLA-DOA-204ENST00000485901 DPH3Q96FX2 82 aa7.68□□□□□ -1.18
HLA-DOA-204ENST00000485901 IGLV4-69A0A075B6H9 119 aa7.67□□□□□ -1.18
HLA-DOA-204ENST00000485901 SEC11AP67812 179 aa7.67□□□□□ -1.18
HLA-DOA-204ENST00000485901 COX6A2Q02221 97 aa7.67□□□□□ -1.18
HLA-DOA-204ENST00000485901 ZC2HC1BQ5TFG8 222 aa7.67□□□□□ -1.18
HLA-DOA-204ENST00000485901 LINC00173Q6ZV60 143 aa7.67□□□□□ -1.18
HLA-DOA-204ENST00000485901 OR10D4PQ8NGN7 298 aa7.67□□□□□ -1.18
HLA-DOA-204ENST00000485901 CARD19Q96LW7 228 aa7.67□□□□□ -1.18
HLA-DOA-204ENST00000485901 PLA2G2DQ9UNK4 145 aa7.67□□□□□ -1.18
HLA-DOA-204ENST00000485901 PKIGQ9Y2B9 76 aa7.67□□□□□ -1.18
HLA-DOA-204ENST00000485901 A0A087WZ39 114 aa7.66□□□□□ -1.18
HLA-DOA-204ENST00000485901 C2orf48Q96LS8 159 aa7.66□□□□□ -1.18
HLA-DOA-204ENST00000485901 CAMK2N2Q96S95 79 aa7.66□□□□□ -1.18
HLA-DOA-204ENST00000485901 F8WDY8 70 aa7.65□□□□□ -1.18
HLA-DOA-204ENST00000485901 SPAG11BQ08648 103 aa7.65□□□□□ -1.18
HLA-DOA-204ENST00000485901 FAM19A3Q7Z5A8 133 aa7.65□□□□□ -1.18
HLA-DOA-204ENST00000485901 LINC01561Q8N1V8 128 aa7.65□□□□□ -1.18
HLA-DOA-204ENST00000485901 ORAOV1Q8WV07 137 aa7.65□□□□□ -1.18
HLA-DOA-204ENST00000485901 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.65□□□□□ -1.18
HLA-DOA-204ENST00000485901 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.64□□□□□ -1.19
HLA-DOA-204ENST00000485901 HERVK_113P63121 156 aa7.64□□□□□ -1.19
HLA-DOA-204ENST00000485901 CIRBPQ14011 172 aaKnown RBP7.64□□□□□ -1.19
HLA-DOA-204ENST00000485901 URB1-AS1Q96HZ7 61 aa7.64□□□□□ -1.19
HLA-DOA-204ENST00000485901 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
HLA-DOA-204ENST00000485901 LINC00474Q9P2X8 69 aa7.64□□□□□ -1.19
HLA-DOA-204ENST00000485901 PANO1I0J062 215 aa7.63□□□□□ -1.19
HLA-DOA-204ENST00000485901 HBDP02042 147 aa7.63□□□□□ -1.19
HLA-DOA-204ENST00000485901 PMVKQ15126 192 aa7.63□□□□□ -1.19
HLA-DOA-204ENST00000485901 Q6ZRU5 148 aa7.63□□□□□ -1.19
HLA-DOA-204ENST00000485901 CST9LQ9H4G1 147 aa7.63□□□□□ -1.19
HLA-DOA-204ENST00000485901 A0A0J9YXV3 536 aa7.62□□□□□ -1.19
HLA-DOA-204ENST00000485901 NDUFA1O15239 70 aa7.62□□□□□ -1.19
HLA-DOA-204ENST00000485901 TRGC2P03986 189 aa7.62□□□□□ -1.19
HLA-DOA-204ENST00000485901 CHTF8P0CG12 524 aa7.62□□□□□ -1.19
HLA-DOA-204ENST00000485901 RNF151Q2KHN1 245 aa7.62□□□□□ -1.19
HLA-DOA-204ENST00000485901 SPACA4Q8TDM5 124 aa7.62□□□□□ -1.19
HLA-DOA-204ENST00000485901 CHCHD1Q96BP2 118 aaKnown RBP7.62□□□□□ -1.19
HLA-DOA-204ENST00000485901 A0A087WYN8 130 aa7.61□□□□□ -1.19
HLA-DOA-204ENST00000485901 A0A096LNJ9 63 aa7.61□□□□□ -1.19
HLA-DOA-204ENST00000485901 IGKV2-24A0A0C4DH68 120 aa7.61□□□□□ -1.19
HLA-DOA-204ENST00000485901 LOC107984640A0A0U1RRK4 108 aa7.61□□□□□ -1.19
HLA-DOA-204ENST00000485901 TINCRA0A1B0GVN0 87 aa7.61□□□□□ -1.19
HLA-DOA-204ENST00000485901 COLCA2A8K830 154 aa7.61□□□□□ -1.19
HLA-DOA-204ENST00000485901 ATP5LO75964 103 aa7.61□□□□□ -1.19
HLA-DOA-204ENST00000485901 MAJINQ3KP22 176 aa7.61□□□□□ -1.19
HLA-DOA-204ENST00000485901 PACRGQ96M98 296 aaPredicted RBP7.61□□□□□ -1.19
HLA-DOA-204ENST00000485901 MRPL35Q9NZE8 188 aaKnown RBP7.61□□□□□ -1.19
HLA-DOA-204ENST00000485901 PKHD1L1Q86WI1 4243 aa7.61□□□□□ -1.19
HLA-DOA-204ENST00000485901 PRSS2P07478 247 aa7.6□□□□□ -1.19
HLA-DOA-204ENST00000485901 NDUFA6P56556 154 aa7.6□□□□□ -1.19
HLA-DOA-204ENST00000485901 KIAA0087Q14695 138 aa7.6□□□□□ -1.19
HLA-DOA-204ENST00000485901 PMCHL1Q16048 86 aa7.6□□□□□ -1.19
HLA-DOA-204ENST00000485901 PDZD11Q5EBL8 140 aa7.6□□□□□ -1.19
HLA-DOA-204ENST00000485901 BAGE3Q86Y29 109 aa7.6□□□□□ -1.19
HLA-DOA-204ENST00000485901 CDKN2A-AS1Q9UH64 79 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms