RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 COX7A2LO14548 114 aa13.06□□□□□ -0.32
COL6A2-208ENST00000485591 PMVKQ15126 192 aa13.06□□□□□ -0.32
COL6A2-208ENST00000485591 CFAP161Q6P656 301 aa13.06□□□□□ -0.32
COL6A2-208ENST00000485591 C15orf56Q8N910 161 aa13.06□□□□□ -0.32
COL6A2-208ENST00000485591 PGPEP1Q9NXJ5 209 aa13.06□□□□□ -0.32
COL6A2-208ENST00000485591 HECTD4Q9Y4D8 3996 aa13.06□□□□□ -0.32
COL6A2-208ENST00000485591 CST9LQ9H4G1 147 aa13.05□□□□□ -0.32
COL6A2-208ENST00000485591 PRSS1P07477 247 aa13.04□□□□□ -0.32
COL6A2-208ENST00000485591 SEC11AP67812 179 aa13.04□□□□□ -0.32
COL6A2-208ENST00000485591 EPPK1P58107 5090 aaKnown RBP13.03□□□□□ -0.32
COL6A2-208ENST00000485591 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.03□□□□□ -0.32
COL6A2-208ENST00000485591 IGHV1-58A0A0C4DH39 117 aa13.03□□□□□ -0.32
COL6A2-208ENST00000485591 COX6A2Q02221 97 aa13.03□□□□□ -0.32
COL6A2-208ENST00000485591 COA6Q5JTJ3 125 aaKnown RBP13.03□□□□□ -0.32
COL6A2-208ENST00000485591 C5orf38Q86SI9 138 aa13.03□□□□□ -0.32
COL6A2-208ENST00000485591 GVQW2A0A096LPI5 108 aaPredicted RBP13.02□□□□□ -0.33
COL6A2-208ENST00000485591 MALP21145 153 aa13.02□□□□□ -0.33
COL6A2-208ENST00000485591 HERVK_113P63121 156 aa13.02□□□□□ -0.33
COL6A2-208ENST00000485591 IFI27L1Q96BM0 104 aa13.02□□□□□ -0.33
COL6A2-208ENST00000485591 DNAH11Q96DT5 4516 aa13.02□□□□□ -0.33
COL6A2-208ENST00000485591 IGLV5-52A0A0A0MRZ9 124 aa13.01□□□□□ -0.33
COL6A2-208ENST00000485591 A0A0J9YXV3 536 aa13.01□□□□□ -0.33
COL6A2-208ENST00000485591 hDV102S1A0JD36 115 aa13.01□□□□□ -0.33
COL6A2-208ENST00000485591 LEPROTL1O95214 131 aa13.01□□□□□ -0.33
COL6A2-208ENST00000485591 FUSP35637 526 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL6A2-208ENST00000485591 A0A087WZ39 114 aa13□□□□□ -0.33
COL6A2-208ENST00000485591 C16orf90A8MZG2 172 aa13□□□□□ -0.33
COL6A2-208ENST00000485591 APOMO95445 188 aa13□□□□□ -0.33
COL6A2-208ENST00000485591 NDUFA6P56556 154 aa13□□□□□ -0.33
COL6A2-208ENST00000485591 TINCRA0A1B0GVN0 87 aa12.99□□□□□ -0.33
COL6A2-208ENST00000485591 HIGD2BQ4VC39 106 aa12.99□□□□□ -0.33
COL6A2-208ENST00000485591 GEMIN7Q9H840 131 aaKnown RBP12.99□□□□□ -0.33
COL6A2-208ENST00000485591 LINC01561Q8N1V8 128 aa12.98□□□□□ -0.33
COL6A2-208ENST00000485591 HSPB8Q9UJY1 196 aa12.98□□□□□ -0.33
COL6A2-208ENST00000485591 TRAV12-1A0A0B4J245 112 aa12.97□□□□□ -0.33
COL6A2-208ENST00000485591 IGLC3P0DOY3 106 aa12.97□□□□□ -0.33
COL6A2-208ENST00000485591 CNBPP62633 177 aaKnown RBP12.97□□□□□ -0.33
COL6A2-208ENST00000485591 IGHV3-64A0A075B6Q5 118 aa12.96□□□□□ -0.33
COL6A2-208ENST00000485591 IGLV5-45A0A087WSX0 123 aa12.96□□□□□ -0.33
COL6A2-208ENST00000485591 OR10D4PQ8NGN7 298 aa12.96□□□□□ -0.33
COL6A2-208ENST00000485591 PACRGQ96M98 296 aaPredicted RBP12.96□□□□□ -0.33
COL6A2-208ENST00000485591 CDKN2A-AS1Q9UH64 79 aa12.96□□□□□ -0.33
COL6A2-208ENST00000485591 IGLV4-69A0A075B6H9 119 aa12.95□□□□□ -0.34
COL6A2-208ENST00000485591 FABP4P15090 132 aa12.95□□□□□ -0.34
COL6A2-208ENST00000485591 ORAOV1Q8WV07 137 aa12.95□□□□□ -0.34
COL6A2-208ENST00000485591 CHAC1Q9BUX1 264 aa12.95□□□□□ -0.34
COL6A2-208ENST00000485591 PKHD1P08F94 4074 aa12.94□□□□□ -0.34
COL6A2-208ENST00000485591 ZNF561-AS1K7EIQ3 104 aa12.94□□□□□ -0.34
COL6A2-208ENST00000485591 GCSHP23434 173 aa12.94□□□□□ -0.34
COL6A2-208ENST00000485591 LINC00469Q8N7U9 141 aa12.94□□□□□ -0.34
COL6A2-208ENST00000485591 CHTOPQ9Y3Y2 248 aaKnown RBP12.94□□□□□ -0.34
COL6A2-208ENST00000485591 SLPIP03973 132 aa12.93□□□□□ -0.34
COL6A2-208ENST00000485591 SPAG11BQ08648 103 aa12.93□□□□□ -0.34
COL6A2-208ENST00000485591 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.92□□□□□ -0.34
COL6A2-208ENST00000485591 LINC00526Q96FQ7 95 aa12.92□□□□□ -0.34
COL6A2-208ENST00000485591 F8VRH5 84 aa12.91□□□□□ -0.34
COL6A2-208ENST00000485591 C9orf163Q8N9P6 203 aa12.91□□□□□ -0.34
COL6A2-208ENST00000485591 C2orf48Q96LS8 159 aa12.91□□□□□ -0.34
COL6A2-208ENST00000485591 C11orf86A6NJI1 115 aa12.9□□□□□ -0.34
COL6A2-208ENST00000485591 KRTAP10-1P60331 282 aa12.9□□□□□ -0.34
COL6A2-208ENST00000485591 ODF1Q14990 250 aa12.9□□□□□ -0.34
COL6A2-208ENST00000485591 MAP1LC3CQ9BXW4 147 aa12.9□□□□□ -0.34
COL6A2-208ENST00000485591 MRPL35Q9NZE8 188 aaKnown RBP12.9□□□□□ -0.34
COL6A2-208ENST00000485591 DNAH5Q8TE73 4624 aa12.9□□□□□ -0.34
COL6A2-208ENST00000485591 SMIM1B2RUZ4 78 aa12.89□□□□□ -0.35
COL6A2-208ENST00000485591 H0Y8G0 127 aa12.89□□□□□ -0.35
COL6A2-208ENST00000485591 H3BRM9 83 aa12.89□□□□□ -0.35
COL6A2-208ENST00000485591 ZNF22P17026 224 aaPredicted RBP12.89□□□□□ -0.35
COL6A2-208ENST00000485591 F8WDY8 70 aa12.88□□□□□ -0.35
COL6A2-208ENST00000485591 SYCNQ0VAF6 134 aa12.88□□□□□ -0.35
COL6A2-208ENST00000485591 KIAA0087Q14695 138 aa12.88□□□□□ -0.35
COL6A2-208ENST00000485591 LINC01620Q4KN68 170 aa12.88□□□□□ -0.35
COL6A2-208ENST00000485591 DYNC1H1Q14204 4646 aaKnown RBP12.87□□□□□ -0.35
COL6A2-208ENST00000485591 CARD19Q96LW7 228 aa12.87□□□□□ -0.35
COL6A2-208ENST00000485591 CAMK2N2Q96S95 79 aa12.87□□□□□ -0.35
COL6A2-208ENST00000485591 S100A6P06703 90 aa12.86□□□□□ -0.35
COL6A2-208ENST00000485591 SPINK8P0C7L1 97 aa12.86□□□□□ -0.35
COL6A2-208ENST00000485591 Q8IZM0 81 aa12.86□□□□□ -0.35
COL6A2-208ENST00000485591 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
COL6A2-208ENST00000485591 Q6ZRU5 148 aa12.85□□□□□ -0.35
COL6A2-208ENST00000485591 SYS1-DBNDD2H3BUS1 97 aa12.84□□□□□ -0.35
COL6A2-208ENST00000485591 NDUFA1O15239 70 aa12.84□□□□□ -0.35
COL6A2-208ENST00000485591 PRSS2P07478 247 aa12.84□□□□□ -0.35
COL6A2-208ENST00000485591 HIST3H2BBQ8N257 126 aa12.84□□□□□ -0.35
COL6A2-208ENST00000485591 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
COL6A2-208ENST00000485591 BIRC6Q9NR09 4857 aa12.83□□□□□ -0.35
COL6A2-208ENST00000485591 IGLV5-39A0A0G2JS06 123 aa12.82□□□□□ -0.36
COL6A2-208ENST00000485591 PLNP26678 52 aa12.82□□□□□ -0.36
COL6A2-208ENST00000485591 SDIM1Q6ZPB5 146 aa12.82□□□□□ -0.36
COL6A2-208ENST00000485591 C6orf226Q5I0X4 101 aa12.81□□□□□ -0.36
COL6A2-208ENST00000485591 Q6ZSA8 131 aa12.81□□□□□ -0.36
COL6A2-208ENST00000485591 COX7B2Q8TF08 81 aa12.81□□□□□ -0.36
COL6A2-208ENST00000485591 DPM2O94777 84 aa12.8□□□□□ -0.36
COL6A2-208ENST00000485591 C3orf79P0CE67 100 aa12.8□□□□□ -0.36
COL6A2-208ENST00000485591 S100A2P29034 98 aa12.8□□□□□ -0.36
COL6A2-208ENST00000485591 CXCL5P42830 114 aa12.8□□□□□ -0.36
COL6A2-208ENST00000485591 RNF151Q2KHN1 245 aa12.8□□□□□ -0.36
COL6A2-208ENST00000485591 PET117Q6UWS5 81 aa12.8□□□□□ -0.36
COL6A2-208ENST00000485591 C2orf82Q6UX34 121 aa12.8□□□□□ -0.36
COL6A2-208ENST00000485591 UNQ6190/PRO20217Q6UXQ8 127 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms