RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 PRR34Q9NV39 138 aa12.44□□□□□ -0.42
ERCC2-205ENST00000485403 IGLV4-69A0A075B6H9 119 aa12.43□□□□□ -0.42
ERCC2-205ENST00000485403 TRAV9-2A0A087WT02 112 aa12.43□□□□□ -0.42
ERCC2-205ENST00000485403 DPM2O94777 84 aa12.43□□□□□ -0.42
ERCC2-205ENST00000485403 SS18Q15532 418 aa12.43□□□□□ -0.42
ERCC2-205ENST00000485403 C10orf126Q8N4M7 172 aa12.43□□□□□ -0.42
ERCC2-205ENST00000485403 PAM16Q9Y3D7 125 aa12.43□□□□□ -0.42
ERCC2-205ENST00000485403 IGLC3P0DOY3 106 aa12.42□□□□□ -0.42
ERCC2-205ENST00000485403 C1orf134Q5TEV5 83 aa12.42□□□□□ -0.42
ERCC2-205ENST00000485403 ENHOQ6UWT2 76 aa12.42□□□□□ -0.42
ERCC2-205ENST00000485403 C6orf223Q8N319 242 aa12.42□□□□□ -0.42
ERCC2-205ENST00000485403 RTL8CO15255 209 aa12.42□□□□□ -0.42
ERCC2-205ENST00000485403 IGKCP01834 107 aa12.42□□□□□ -0.42
ERCC2-205ENST00000485403 PLNP26678 52 aa12.42□□□□□ -0.42
ERCC2-205ENST00000485403 SEC11AP67812 179 aa12.42□□□□□ -0.42
ERCC2-205ENST00000485403 LINC00242Q5T6M2 205 aa12.42□□□□□ -0.42
ERCC2-205ENST00000485403 TINCRA0A1B0GVN0 87 aa12.41□□□□□ -0.42
ERCC2-205ENST00000485403 C11orf86A6NJI1 115 aa12.41□□□□□ -0.42
ERCC2-205ENST00000485403 CCL25O15444 150 aa12.41□□□□□ -0.42
ERCC2-205ENST00000485403 NFE4Q86UQ8 179 aa12.41□□□□□ -0.42
ERCC2-205ENST00000485403 CHAC1Q9BUX1 264 aa12.41□□□□□ -0.42
ERCC2-205ENST00000485403 GEMIN7Q9H840 131 aaKnown RBP12.41□□□□□ -0.42
ERCC2-205ENST00000485403 IBA57-AS1B1ANH7 110 aa12.4□□□□□ -0.42
ERCC2-205ENST00000485403 SPATA45Q537H7 98 aa12.4□□□□□ -0.42
ERCC2-205ENST00000485403 FAM19A3Q7Z5A8 133 aa12.4□□□□□ -0.42
ERCC2-205ENST00000485403 ATOH7Q8N100 152 aa12.4□□□□□ -0.42
ERCC2-205ENST00000485403 MIAQ16674 131 aa12.39□□□□□ -0.43
ERCC2-205ENST00000485403 CHCHD10Q8WYQ3 142 aaPredicted RBP12.39□□□□□ -0.43
ERCC2-205ENST00000485403 IGLV10-54A0A075B6I4 117 aa12.38□□□□□ -0.43
ERCC2-205ENST00000485403 HERVK_113P63121 156 aa12.38□□□□□ -0.43
ERCC2-205ENST00000485403 COX6A2Q02221 97 aa12.38□□□□□ -0.43
ERCC2-205ENST00000485403 MIEN1Q9BRT3 115 aa12.38□□□□□ -0.43
ERCC2-205ENST00000485403 EPPK1P58107 5090 aaKnown RBP12.38□□□□□ -0.43
ERCC2-205ENST00000485403 TRAV8-4A0A0B4J246 113 aa12.37□□□□□ -0.43
ERCC2-205ENST00000485403 XCL1P47992 114 aa12.37□□□□□ -0.43
ERCC2-205ENST00000485403 LINC00336Q6ZUF6 198 aa12.37□□□□□ -0.43
ERCC2-205ENST00000485403 HECTD4Q9Y4D8 3996 aa12.37□□□□□ -0.43
ERCC2-205ENST00000485403 TRAV8-3A0A0A6YYJ7 113 aa12.37□□□□□ -0.43
ERCC2-205ENST00000485403 ZNF22P17026 224 aaPredicted RBP12.37□□□□□ -0.43
ERCC2-205ENST00000485403 TMEM170BQ5T4T1 132 aa12.37□□□□□ -0.43
ERCC2-205ENST00000485403 LINC00469Q8N7U9 141 aa12.37□□□□□ -0.43
ERCC2-205ENST00000485403 Q9HAA7 133 aa12.37□□□□□ -0.43
ERCC2-205ENST00000485403 HSBP1L1C9JCN9 74 aa12.36□□□□□ -0.43
ERCC2-205ENST00000485403 Q6ZRN7 208 aaPredicted RBP12.36□□□□□ -0.43
ERCC2-205ENST00000485403 CD164L2Q6UWJ8 174 aa12.35□□□□□ -0.43
ERCC2-205ENST00000485403 PKD1P98161 4303 aa12.35□□□□□ -0.43
ERCC2-205ENST00000485403 IGLV5-45A0A087WSX0 123 aa12.34□□□□□ -0.43
ERCC2-205ENST00000485403 GAGE12HA6NDE8 117 aa12.34□□□□□ -0.43
ERCC2-205ENST00000485403 C1orf43Q9BWL3 253 aa12.34□□□□□ -0.43
ERCC2-205ENST00000485403 CDKN2A-AS1Q9UH64 79 aa12.34□□□□□ -0.43
ERCC2-205ENST00000485403 DNAH11Q96DT5 4516 aa12.33□□□□□ -0.43
ERCC2-205ENST00000485403 IGKV2D-24A0A075B6R9 120 aa12.33□□□□□ -0.44
ERCC2-205ENST00000485403 H3BRM9 83 aa12.33□□□□□ -0.44
ERCC2-205ENST00000485403 RMI2Q96E14 147 aa12.33□□□□□ -0.44
ERCC2-205ENST00000485403 UQCR10Q9UDW1 63 aa12.33□□□□□ -0.44
ERCC2-205ENST00000485403 IGHV3OR16-9A0A0B4J2B5 98 aa12.32□□□□□ -0.44
ERCC2-205ENST00000485403 hDV102S1A0JD36 115 aa12.32□□□□□ -0.44
ERCC2-205ENST00000485403 MAJINQ3KP22 176 aa12.32□□□□□ -0.44
ERCC2-205ENST00000485403 C5orf38Q86SI9 138 aa12.32□□□□□ -0.44
ERCC2-205ENST00000485403 STPG4Q8N801 248 aa12.32□□□□□ -0.44
ERCC2-205ENST00000485403 C14orf144Q96I85 54 aa12.32□□□□□ -0.44
ERCC2-205ENST00000485403 FOXI1Q12951 378 aa12.32□□□□□ -0.44
ERCC2-205ENST00000485403 PKHD1P08F94 4074 aa12.31□□□□□ -0.44
ERCC2-205ENST00000485403 HERVK_113P61574 105 aa12.31□□□□□ -0.44
ERCC2-205ENST00000485403 TMEM223A0PJW6 202 aa12.3□□□□□ -0.44
ERCC2-205ENST00000485403 COX7A2LO14548 114 aa12.3□□□□□ -0.44
ERCC2-205ENST00000485403 KRTAP26-1Q6PEX3 210 aa12.3□□□□□ -0.44
ERCC2-205ENST00000485403 A0A087WZ39 114 aa12.29□□□□□ -0.44
ERCC2-205ENST00000485403 SPINK8P0C7L1 97 aa12.29□□□□□ -0.44
ERCC2-205ENST00000485403 TNP2Q05952 138 aa12.29□□□□□ -0.44
ERCC2-205ENST00000485403 ANKRD39Q53RE8 183 aa12.27□□□□□ -0.44
ERCC2-205ENST00000485403 TM2D2Q9BX73 214 aa12.27□□□□□ -0.44
ERCC2-205ENST00000485403 IGHV3-64A0A075B6Q5 118 aa12.27□□□□□ -0.45
ERCC2-205ENST00000485403 A0A1B0GVY2 172 aa12.27□□□□□ -0.45
ERCC2-205ENST00000485403 MALP21145 153 aa12.27□□□□□ -0.45
ERCC2-205ENST00000485403 LINC01561Q8N1V8 128 aa12.27□□□□□ -0.45
ERCC2-205ENST00000485403 COX11Q9Y6N1 276 aa12.27□□□□□ -0.45
ERCC2-205ENST00000485403 SMIM1B2RUZ4 78 aa12.26□□□□□ -0.45
ERCC2-205ENST00000485403 IGHV1-58A0A0C4DH39 117 aa12.25□□□□□ -0.45
ERCC2-205ENST00000485403 E9PLD3 99 aa12.25□□□□□ -0.45
ERCC2-205ENST00000485403 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
ERCC2-205ENST00000485403 M0R143 59 aa12.23□□□□□ -0.45
ERCC2-205ENST00000485403 LEPROTO15243 131 aa12.23□□□□□ -0.45
ERCC2-205ENST00000485403 APOMO95445 188 aa12.23□□□□□ -0.45
ERCC2-205ENST00000485403 HNRNPA3P51991 378 aaKnown RBP12.23□□□□□ -0.45
ERCC2-205ENST00000485403 PLEKHB2Q96CS7 222 aa12.23□□□□□ -0.45
ERCC2-205ENST00000485403 IGKV2D-26A0A0A0MRZ7 120 aa12.22□□□□□ -0.45
ERCC2-205ENST00000485403 IGLV5-39A0A0G2JS06 123 aa12.22□□□□□ -0.45
ERCC2-205ENST00000485403 NMUP48645 174 aa12.22□□□□□ -0.45
ERCC2-205ENST00000485403 CTAG1AP78358 180 aa12.22□□□□□ -0.45
ERCC2-205ENST00000485403 SLC25A34Q6PIV7 304 aa12.22□□□□□ -0.45
ERCC2-205ENST00000485403 PSCAO43653 123 aa12.21□□□□□ -0.45
ERCC2-205ENST00000485403 DNAH5Q8TE73 4624 aa12.21□□□□□ -0.46
ERCC2-205ENST00000485403 COX8AP10176 69 aa12.21□□□□□ -0.46
ERCC2-205ENST00000485403 ORAOV1Q8WV07 137 aa12.21□□□□□ -0.46
ERCC2-205ENST00000485403 LGALS3P17931 250 aaKnown RBP12.2□□□□□ -0.46
ERCC2-205ENST00000485403 CFAP161Q6P656 301 aa12.2□□□□□ -0.46
ERCC2-205ENST00000485403 MAPKAPK5-AS1Q8N8E1 139 aa12.2□□□□□ -0.46
ERCC2-205ENST00000485403 COX7B2Q8TF08 81 aa12.2□□□□□ -0.46
ERCC2-205ENST00000485403 TOMM7Q9P0U1 55 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms