RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 LOC100131303A0A0U1RQF7 123 aa11.65□□□□□ -0.54
PCDH17-202ENST00000484979 C6orf99Q4VX62 202 aa11.65□□□□□ -0.54
PCDH17-202ENST00000484979 C16orf95Q9H693 158 aa11.64□□□□□ -0.55
PCDH17-202ENST00000484979 AGRNO00468 2067 aa11.64□□□□□ -0.55
PCDH17-202ENST00000484979 COL5A1P20908 1838 aaPredicted RBP11.64□□□□□ -0.55
PCDH17-202ENST00000484979 PRM2P04554 102 aa11.64□□□□□ -0.55
PCDH17-202ENST00000484979 UBE2D3P61077 147 aa11.64□□□□□ -0.55
PCDH17-202ENST00000484979 UBE2D2P62837 147 aa11.64□□□□□ -0.55
PCDH17-202ENST00000484979 CNFNQ9BYD5 112 aa11.64□□□□□ -0.55
PCDH17-202ENST00000484979 C14orf132Q9NPU4 83 aa11.64□□□□□ -0.55
PCDH17-202ENST00000484979 MUC7Q8TAX7 377 aa11.62□□□□□ -0.55
PCDH17-202ENST00000484979 NUPR2A6NF83 97 aa11.62□□□□□ -0.55
PCDH17-202ENST00000484979 TIMM17BO60830 172 aa11.62□□□□□ -0.55
PCDH17-202ENST00000484979 FAM236AA0A1B0GUQ0 79 aa11.62□□□□□ -0.55
PCDH17-202ENST00000484979 FAM236BA0A1B0GV22 79 aa11.62□□□□□ -0.55
PCDH17-202ENST00000484979 LINC00643Q86TS7 51 aa11.62□□□□□ -0.55
PCDH17-202ENST00000484979 UBE2D4Q9Y2X8 147 aa11.61□□□□□ -0.55
PCDH17-202ENST00000484979 TCL1BO95988 128 aa11.61□□□□□ -0.55
PCDH17-202ENST00000484979 M0R378 163 aa11.6□□□□□ -0.55
PCDH17-202ENST00000484979 PTH2Q96A98 100 aa11.6□□□□□ -0.55
PCDH17-202ENST00000484979 LINC00526Q96FQ7 95 aa11.6□□□□□ -0.55
PCDH17-202ENST00000484979 LOC107984640A0A0U1RRK4 108 aa11.6□□□□□ -0.55
PCDH17-202ENST00000484979 WFDC9Q8NEX5 89 aa11.6□□□□□ -0.55
PCDH17-202ENST00000484979 PTPRSQ13332 1948 aa11.6□□□□□ -0.55
PCDH17-202ENST00000484979 LINC00474Q9P2X8 69 aa11.6□□□□□ -0.55
PCDH17-202ENST00000484979 ATRQ13535 2644 aa11.59□□□□□ -0.55
PCDH17-202ENST00000484979 HECTD1Q9ULT8 2610 aa11.59□□□□□ -0.55
PCDH17-202ENST00000484979 MRPS12O15235 138 aaKnown RBP11.59□□□□□ -0.55
PCDH17-202ENST00000484979 TRAV23DV6A0A075B6W5 121 aa11.58□□□□□ -0.55
PCDH17-202ENST00000484979 CDC42SE2Q9NRR3 84 aa11.58□□□□□ -0.56
PCDH17-202ENST00000484979 ZNF706Q9Y5V0 76 aaPredicted RBP11.58□□□□□ -0.56
PCDH17-202ENST00000484979 IGKV2-28A0A075B6P5 120 aa11.57□□□□□ -0.56
PCDH17-202ENST00000484979 IGKV2D-28P01615 120 aa11.57□□□□□ -0.56
PCDH17-202ENST00000484979 MAPKAPK5-AS1Q8N8E1 139 aa11.57□□□□□ -0.56
PCDH17-202ENST00000484979 Q8IZM0 81 aa11.56□□□□□ -0.56
PCDH17-202ENST00000484979 DHRS4-AS1Q9P1J3 65 aa11.56□□□□□ -0.56
PCDH17-202ENST00000484979 TP73-AS1Q9UF72 201 aa11.56□□□□□ -0.56
PCDH17-202ENST00000484979 IGKV4-1P06312 121 aa11.56□□□□□ -0.56
PCDH17-202ENST00000484979 SS18L2Q9UHA2 77 aa11.56□□□□□ -0.56
PCDH17-202ENST00000484979 TRBV30A0A0K0K1B3 111 aa11.55□□□□□ -0.56
PCDH17-202ENST00000484979 UBE2D1P51668 147 aa11.55□□□□□ -0.56
PCDH17-202ENST00000484979 C1orf158Q8N1D5 194 aa11.55□□□□□ -0.56
PCDH17-202ENST00000484979 UPK3BQ9BT76 320 aa11.55□□□□□ -0.56
PCDH17-202ENST00000484979 B5MCH6 92 aa11.55□□□□□ -0.56
PCDH17-202ENST00000484979 COX17Q14061 63 aa11.55□□□□□ -0.56
PCDH17-202ENST00000484979 A8MZ25 164 aa11.54□□□□□ -0.56
PCDH17-202ENST00000484979 Q6ZQY7 126 aa11.54□□□□□ -0.56
PCDH17-202ENST00000484979 CCKP06307 115 aa11.54□□□□□ -0.56
PCDH17-202ENST00000484979 EDN2P20800 178 aa11.54□□□□□ -0.56
PCDH17-202ENST00000484979 CYSRT1A8MQ03 144 aa11.54□□□□□ -0.56
PCDH17-202ENST00000484979 EXPH5Q8NEV8 1989 aa11.53□□□□□ -0.56
PCDH17-202ENST00000484979 SLPIP03973 132 aa11.53□□□□□ -0.56
PCDH17-202ENST00000484979 RETNQ9HD89 108 aa11.53□□□□□ -0.56
PCDH17-202ENST00000484979 TRIAP1O43715 76 aa11.52□□□□□ -0.56
PCDH17-202ENST00000484979 C5orf47Q569G3 176 aa11.52□□□□□ -0.56
PCDH17-202ENST00000484979 Q6ZTC4 211 aa11.52□□□□□ -0.56
PCDH17-202ENST00000484979 EGFEM1PQ0D2K5 195 aa11.52□□□□□ -0.57
PCDH17-202ENST00000484979 TET2Q6N021 2002 aaPredicted RBP11.52□□□□□ -0.57
PCDH17-202ENST00000484979 LINC00242Q5T6M2 205 aa11.5□□□□□ -0.57
PCDH17-202ENST00000484979 PPDPFQ9H3Y8 114 aa11.5□□□□□ -0.57
PCDH17-202ENST00000484979 RAI1Q7Z5J4 1906 aaPredicted RBP11.5□□□□□ -0.57
PCDH17-202ENST00000484979 GAS8-AS1O95177 125 aa11.5□□□□□ -0.57
PCDH17-202ENST00000484979 ATP5EP2Q5VTU8 51 aa11.5□□□□□ -0.57
PCDH17-202ENST00000484979 IGIPA6NJ69 53 aa11.49□□□□□ -0.57
PCDH17-202ENST00000484979 YPEL4Q96NS1 127 aa11.49□□□□□ -0.57
PCDH17-202ENST00000484979 ATG2AQ2TAZ0 1938 aa11.49□□□□□ -0.57
PCDH17-202ENST00000484979 RNASE8Q8TDE3 154 aaKnown RBP11.49□□□□□ -0.57
PCDH17-202ENST00000484979 TEX49A0A1B0GTD5 131 aa11.48□□□□□ -0.57
PCDH17-202ENST00000484979 ZNF73O43830 326 aaPredicted RBP11.48□□□□□ -0.57
PCDH17-202ENST00000484979 SEC61GP60059 68 aa11.48□□□□□ -0.57
PCDH17-202ENST00000484979 PRRC2CQ9Y520 2896 aaKnown RBP11.47□□□□□ -0.57
PCDH17-202ENST00000484979 COX8CQ7Z4L0 72 aa11.47□□□□□ -0.57
PCDH17-202ENST00000484979 USP17L23D6RBM5 183 aa11.47□□□□□ -0.57
PCDH17-202ENST00000484979 FHL2Q14192 279 aa11.47□□□□□ -0.57
PCDH17-202ENST00000484979 UNQ6190/PRO20217Q6UXQ8 127 aa11.47□□□□□ -0.57
PCDH17-202ENST00000484979 CASC2Q6XLA1 102 aa11.47□□□□□ -0.57
PCDH17-202ENST00000484979 SPINK6Q6UWN8 80 aa11.46□□□□□ -0.57
PCDH17-202ENST00000484979 NHLRC4P0CG21 123 aaPredicted RBP11.46□□□□□ -0.58
PCDH17-202ENST00000484979 BEAN1Q3B7T3 259 aa11.46□□□□□ -0.58
PCDH17-202ENST00000484979 EML5Q05BV3 1969 aa11.46□□□□□ -0.58
PCDH17-202ENST00000484979 SVIPQ8NHG7 77 aa11.45□□□□□ -0.58
PCDH17-202ENST00000484979 CSDC2Q9Y534 153 aaKnown RBP11.45□□□□□ -0.58
PCDH17-202ENST00000484979 POM121L12Q8N7R1 296 aa11.45□□□□□ -0.58
PCDH17-202ENST00000484979 PLAC8L1A1L4L8 177 aa11.45□□□□□ -0.58
PCDH17-202ENST00000484979 RPL37AP8A6NKH3 93 aa11.45□□□□□ -0.58
PCDH17-202ENST00000484979 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.44□□□□□ -0.58
PCDH17-202ENST00000484979 G3V4G9 280 aa11.43□□□□□ -0.58
PCDH17-202ENST00000484979 RPL28P46779 137 aaKnown RBP11.43□□□□□ -0.58
PCDH17-202ENST00000484979 SMIM11BQ8TCY0 68 aa11.43□□□□□ -0.58
PCDH17-202ENST00000484979 SMIM1B2RUZ4 78 aa11.42□□□□□ -0.58
PCDH17-202ENST00000484979 LST1O00453 97 aa11.41□□□□□ -0.58
PCDH17-202ENST00000484979 SCXQ7RTU7 201 aa11.41□□□□□ -0.58
PCDH17-202ENST00000484979 ADAMTS20P59510 1910 aa11.41□□□□□ -0.58
PCDH17-202ENST00000484979 C3orf84H3BNL1 204 aa11.41□□□□□ -0.58
PCDH17-202ENST00000484979 PCNTO95613 3336 aa11.41□□□□□ -0.58
PCDH17-202ENST00000484979 IGLV4-60A0A075B6I1 120 aa11.41□□□□□ -0.58
PCDH17-202ENST00000484979 Q8N2B8 174 aa11.41□□□□□ -0.58
PCDH17-202ENST00000484979 M0QXV9 152 aa11.4□□□□□ -0.58
PCDH17-202ENST00000484979 A0A1B0GUV1 79 aa11.4□□□□□ -0.58
PCDH17-202ENST00000484979 C6orf223Q8N319 242 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms