RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 IGLV5-45A0A087WSX0 123 aa13.8□□□□□ -0.2
VCPKMT-203ENST00000484763 COX6A2Q02221 97 aa13.8□□□□□ -0.2
VCPKMT-203ENST00000484763 MIAQ16674 131 aa13.8□□□□□ -0.2
VCPKMT-203ENST00000484763 K7EP13 123 aa13.8□□□□□ -0.2
VCPKMT-203ENST00000484763 STPG4Q8N801 248 aa13.8□□□□□ -0.2
VCPKMT-203ENST00000484763 PAM16Q9Y3D7 125 aa13.8□□□□□ -0.2
VCPKMT-203ENST00000484763 CHCHD10Q8WYQ3 142 aaPredicted RBP13.79□□□□□ -0.2
VCPKMT-203ENST00000484763 CDKN2A-AS1Q9UH64 79 aa13.79□□□□□ -0.2
VCPKMT-203ENST00000484763 IGLV10-54A0A075B6I4 117 aa13.78□□□□□ -0.2
VCPKMT-203ENST00000484763 TRAV8-4A0A0B4J246 113 aa13.78□□□□□ -0.2
VCPKMT-203ENST00000484763 XCL1P47992 114 aa13.78□□□□□ -0.2
VCPKMT-203ENST00000484763 IBA57-AS1B1ANH7 110 aa13.78□□□□□ -0.2
VCPKMT-203ENST00000484763 H3BRM9 83 aa13.78□□□□□ -0.2
VCPKMT-203ENST00000484763 DNAH1Q9P2D7 4330 aa13.78□□□□□ -0.2
VCPKMT-203ENST00000484763 HERVK_113P61574 105 aa13.77□□□□□ -0.21
VCPKMT-203ENST00000484763 SPATA45Q537H7 98 aa13.77□□□□□ -0.21
VCPKMT-203ENST00000484763 VPS13DQ5THJ4 4388 aa13.77□□□□□ -0.21
VCPKMT-203ENST00000484763 IGHV3OR16-9A0A0B4J2B5 98 aa13.76□□□□□ -0.21
VCPKMT-203ENST00000484763 CD164L2Q6UWJ8 174 aa13.76□□□□□ -0.21
VCPKMT-203ENST00000484763 TMEM223A0PJW6 202 aa13.76□□□□□ -0.21
VCPKMT-203ENST00000484763 ANKRD39Q53RE8 183 aa13.76□□□□□ -0.21
VCPKMT-203ENST00000484763 TRAV8-3A0A0A6YYJ7 113 aa13.75□□□□□ -0.21
VCPKMT-203ENST00000484763 SPINK8P0C7L1 97 aa13.73□□□□□ -0.21
VCPKMT-203ENST00000484763 C1orf43Q9BWL3 253 aa13.73□□□□□ -0.21
VCPKMT-203ENST00000484763 Q9HAA7 133 aa13.73□□□□□ -0.21
VCPKMT-203ENST00000484763 A0A087WZ39 114 aa13.72□□□□□ -0.21
VCPKMT-203ENST00000484763 E9PLD3 99 aa13.72□□□□□ -0.21
VCPKMT-203ENST00000484763 TTC32Q5I0X7 151 aa13.72□□□□□ -0.21
VCPKMT-203ENST00000484763 GAGE12HA6NDE8 117 aa13.71□□□□□ -0.21
VCPKMT-203ENST00000484763 FOXI1Q12951 378 aa13.71□□□□□ -0.21
VCPKMT-203ENST00000484763 C5orf38Q86SI9 138 aa13.71□□□□□ -0.21
VCPKMT-203ENST00000484763 KRTAP1-5Q9BYS1 174 aa13.71□□□□□ -0.21
VCPKMT-203ENST00000484763 IGHV3-64A0A075B6Q5 118 aa13.7□□□□□ -0.22
VCPKMT-203ENST00000484763 IGKV2D-24A0A075B6R9 120 aa13.7□□□□□ -0.22
VCPKMT-203ENST00000484763 IGKV2D-26A0A0A0MRZ7 120 aa13.7□□□□□ -0.22
VCPKMT-203ENST00000484763 NBDYA0A0U1RRE5 68 aa13.7□□□□□ -0.22
VCPKMT-203ENST00000484763 SMIM1B2RUZ4 78 aa13.7□□□□□ -0.22
VCPKMT-203ENST00000484763 COX7A2LO14548 114 aa13.7□□□□□ -0.22
VCPKMT-203ENST00000484763 NMUP48645 174 aa13.7□□□□□ -0.22
VCPKMT-203ENST00000484763 IGHV1-58A0A0C4DH39 117 aa13.69□□□□□ -0.22
VCPKMT-203ENST00000484763 RMI2Q96E14 147 aa13.69□□□□□ -0.22
VCPKMT-203ENST00000484763 LINC01561Q8N1V8 128 aa13.69□□□□□ -0.22
VCPKMT-203ENST00000484763 KRTAP26-1Q6PEX3 210 aa13.68□□□□□ -0.22
VCPKMT-203ENST00000484763 LINC00476Q8WZB0 136 aa13.68□□□□□ -0.22
VCPKMT-203ENST00000484763 ALMS1Q8TCU4 4167 aa13.68□□□□□ -0.22
VCPKMT-203ENST00000484763 IGLV5-39A0A0G2JS06 123 aa13.67□□□□□ -0.22
VCPKMT-203ENST00000484763 LEPROTO15243 131 aa13.67□□□□□ -0.22
VCPKMT-203ENST00000484763 LY6G6CO95867 125 aa13.67□□□□□ -0.22
VCPKMT-203ENST00000484763 MALP21145 153 aa13.67□□□□□ -0.22
VCPKMT-203ENST00000484763 PLEKHB2Q96CS7 222 aa13.67□□□□□ -0.22
VCPKMT-203ENST00000484763 J3QQQ9 107 aa13.65□□□□□ -0.22
VCPKMT-203ENST00000484763 TSPEAR-AS2P59090 65 aa13.64□□□□□ -0.23
VCPKMT-203ENST00000484763 C14orf144Q96I85 54 aa13.64□□□□□ -0.23
VCPKMT-203ENST00000484763 PRO1933Q9H354 126 aa13.64□□□□□ -0.23
VCPKMT-203ENST00000484763 COX8AP10176 69 aa13.64□□□□□ -0.23
VCPKMT-203ENST00000484763 LGALS3P17931 250 aaKnown RBP13.64□□□□□ -0.23
VCPKMT-203ENST00000484763 COX11Q9Y6N1 276 aa13.64□□□□□ -0.23
VCPKMT-203ENST00000484763 PCP2Q8IVA1 136 aa13.63□□□□□ -0.23
VCPKMT-203ENST00000484763 TSTD3H0UI37 97 aa13.62□□□□□ -0.23
VCPKMT-203ENST00000484763 APOMO95445 188 aa13.62□□□□□ -0.23
VCPKMT-203ENST00000484763 TM2D2Q9BX73 214 aa13.62□□□□□ -0.23
VCPKMT-203ENST00000484763 TTTY13Q9BZ97 58 aa13.62□□□□□ -0.23
VCPKMT-203ENST00000484763 COX7B2Q8TF08 81 aa13.61□□□□□ -0.23
VCPKMT-203ENST00000484763 SLC25A34Q6PIV7 304 aa13.6□□□□□ -0.23
VCPKMT-203ENST00000484763 ORAOV1Q8WV07 137 aa13.6□□□□□ -0.23
VCPKMT-203ENST00000484763 TOMM7Q9P0U1 55 aa13.6□□□□□ -0.23
VCPKMT-203ENST00000484763 M0R2N4 97 aa13.6□□□□□ -0.23
VCPKMT-203ENST00000484763 BOD1L2Q8IYS8 172 aa13.6□□□□□ -0.23
VCPKMT-203ENST00000484763 DNAH6Q9C0G6 4158 aa13.59□□□□□ -0.23
VCPKMT-203ENST00000484763 UQCR10Q9UDW1 63 aa13.59□□□□□ -0.23
VCPKMT-203ENST00000484763 ZNF815PA8K554 130 aa13.58□□□□□ -0.24
VCPKMT-203ENST00000484763 DLEU1O43261 78 aa13.58□□□□□ -0.24
VCPKMT-203ENST00000484763 Q6ZR54 194 aa13.58□□□□□ -0.24
VCPKMT-203ENST00000484763 Q8IZM0 81 aa13.58□□□□□ -0.24
VCPKMT-203ENST00000484763 MAPKAPK5-AS1Q8N8E1 139 aa13.58□□□□□ -0.24
VCPKMT-203ENST00000484763 TP73-AS1Q9UF72 201 aa13.58□□□□□ -0.24
VCPKMT-203ENST00000484763 MYMXA0A1B0GTQ4 84 aa13.57□□□□□ -0.24
VCPKMT-203ENST00000484763 PRSS2P07478 247 aa13.57□□□□□ -0.24
VCPKMT-203ENST00000484763 NDUFA12Q9UI09 145 aa13.57□□□□□ -0.24
VCPKMT-203ENST00000484763 MIEN1Q9BRT3 115 aa13.56□□□□□ -0.24
VCPKMT-203ENST00000484763 KMT2AQ03164 3969 aa13.56□□□□□ -0.24
VCPKMT-203ENST00000484763 PSCAO43653 123 aa13.55□□□□□ -0.24
VCPKMT-203ENST00000484763 SPAG11BQ08648 103 aa13.55□□□□□ -0.24
VCPKMT-203ENST00000484763 C6orf226Q5I0X4 101 aa13.55□□□□□ -0.24
VCPKMT-203ENST00000484763 C15orf56Q8N910 161 aa13.55□□□□□ -0.24
VCPKMT-203ENST00000484763 NDUFA1O15239 70 aa13.55□□□□□ -0.24
VCPKMT-203ENST00000484763 CFAP161Q6P656 301 aa13.55□□□□□ -0.24
VCPKMT-203ENST00000484763 KIAA0087Q14695 138 aa13.54□□□□□ -0.24
VCPKMT-203ENST00000484763 ZNF625Q96I27 306 aaPredicted RBP13.53□□□□□ -0.24
VCPKMT-203ENST00000484763 SFTA2Q6UW10 78 aa13.53□□□□□ -0.24
VCPKMT-203ENST00000484763 DNAH10Q8IVF4 4471 aa13.52□□□□□ -0.24
VCPKMT-203ENST00000484763 CXCL5P42830 114 aa13.52□□□□□ -0.25
VCPKMT-203ENST00000484763 C6orf223Q8N319 242 aa13.52□□□□□ -0.25
VCPKMT-203ENST00000484763 GVQW2A0A096LPI5 108 aaPredicted RBP13.51□□□□□ -0.25
VCPKMT-203ENST00000484763 USP17L23D6RBM5 183 aa13.51□□□□□ -0.25
VCPKMT-203ENST00000484763 ZNF561-AS1K7EIQ3 104 aa13.51□□□□□ -0.25
VCPKMT-203ENST00000484763 CKS1BP61024 79 aa13.51□□□□□ -0.25
VCPKMT-203ENST00000484763 HIGD2BQ4VC39 106 aa13.51□□□□□ -0.25
VCPKMT-203ENST00000484763 SCGB1D4Q6XE38 83 aa13.51□□□□□ -0.25
VCPKMT-203ENST00000484763 Q6ZRN7 208 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms