RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 POLR2KP53803 58 aaKnown RBP9.55□□□□□ -0.88
HLA-DQB1-208ENST00000484729 ZNF664Q8N3J9 261 aa9.55□□□□□ -0.88
HLA-DQB1-208ENST00000484729 C20orf78Q9BR46 151 aa9.55□□□□□ -0.88
HLA-DQB1-208ENST00000484729 GNB1LQ9BYB4 327 aa9.55□□□□□ -0.88
HLA-DQB1-208ENST00000484729 MT-ND6P03923 174 aa9.54□□□□□ -0.88
HLA-DQB1-208ENST00000484729 SYCNQ0VAF6 134 aa9.54□□□□□ -0.88
HLA-DQB1-208ENST00000484729 CBLN2Q8IUK8 224 aa9.54□□□□□ -0.88
HLA-DQB1-208ENST00000484729 KIR2DL4Q99706 377 aa9.54□□□□□ -0.88
HLA-DQB1-208ENST00000484729 SMCO4Q9NRQ5 59 aa9.54□□□□□ -0.88
HLA-DQB1-208ENST00000484729 TRBV24-1A0A075B6N3 115 aa9.53□□□□□ -0.88
HLA-DQB1-208ENST00000484729 VCYO14598 125 aa9.53□□□□□ -0.88
HLA-DQB1-208ENST00000484729 MALP21145 153 aa9.53□□□□□ -0.88
HLA-DQB1-208ENST00000484729 SMIM2Q9BVW6 85 aa9.53□□□□□ -0.88
HLA-DQB1-208ENST00000484729 KRTAP9-2Q9BYQ4 174 aa9.53□□□□□ -0.88
HLA-DQB1-208ENST00000484729 MAP1LC3AQ9H492 121 aa9.53□□□□□ -0.88
HLA-DQB1-208ENST00000484729 LAMTOR2Q9Y2Q5 125 aa9.53□□□□□ -0.88
HLA-DQB1-208ENST00000484729 KIAA1644Q3SXP7 199 aa9.52□□□□□ -0.89
HLA-DQB1-208ENST00000484729 MRPL18Q9H0U6 180 aaKnown RBP9.52□□□□□ -0.89
HLA-DQB1-208ENST00000484729 LPAP08519 4548 aa9.52□□□□□ -0.89
HLA-DQB1-208ENST00000484729 IGLV4-69A0A075B6H9 119 aa9.51□□□□□ -0.89
HLA-DQB1-208ENST00000484729 COX7A2LO14548 114 aa9.51□□□□□ -0.89
HLA-DQB1-208ENST00000484729 RPL32P62910 135 aaKnown RBP9.51□□□□□ -0.89
HLA-DQB1-208ENST00000484729 SMAGPQ0VAQ4 97 aa9.51□□□□□ -0.89
HLA-DQB1-208ENST00000484729 FABP9Q0Z7S8 132 aa9.51□□□□□ -0.89
HLA-DQB1-208ENST00000484729 RNASE13Q5GAN3 156 aaKnown RBP9.51□□□□□ -0.89
HLA-DQB1-208ENST00000484729 TRAV13-1A0A0B4J241 112 aa9.5□□□□□ -0.89
HLA-DQB1-208ENST00000484729 LOC389332A0A1B0GUA5 103 aa9.5□□□□□ -0.89
HLA-DQB1-208ENST00000484729 C1orf196B1AJZ1 125 aa9.5□□□□□ -0.89
HLA-DQB1-208ENST00000484729 TCAPO15273 167 aa9.5□□□□□ -0.89
HLA-DQB1-208ENST00000484729 PTTG1IPP53801 180 aa9.5□□□□□ -0.89
HLA-DQB1-208ENST00000484729 GAGE2BQ13066 116 aa9.5□□□□□ -0.89
HLA-DQB1-208ENST00000484729 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
HLA-DQB1-208ENST00000484729 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
HLA-DQB1-208ENST00000484729 TRAPPC1Q9Y5R8 145 aa9.5□□□□□ -0.89
HLA-DQB1-208ENST00000484729 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
HLA-DQB1-208ENST00000484729 REG3GQ6UW15 175 aa9.49□□□□□ -0.89
HLA-DQB1-208ENST00000484729 Q6ZRP5 223 aa9.49□□□□□ -0.89
HLA-DQB1-208ENST00000484729 YPEL4Q96NS1 127 aa9.49□□□□□ -0.89
HLA-DQB1-208ENST00000484729 CAMK2N2Q96S95 79 aa9.49□□□□□ -0.89
HLA-DQB1-208ENST00000484729 RAB5AP20339 215 aa9.48□□□□□ -0.89
HLA-DQB1-208ENST00000484729 Q6ZUT4 128 aa9.48□□□□□ -0.89
HLA-DQB1-208ENST00000484729 CSDC2Q9Y534 153 aaKnown RBP9.48□□□□□ -0.89
HLA-DQB1-208ENST00000484729 C5orf38Q86SI9 138 aa9.47□□□□□ -0.89
HLA-DQB1-208ENST00000484729 APOMO95445 188 aa9.46□□□□□ -0.9
HLA-DQB1-208ENST00000484729 RPL18AQ02543 176 aaKnown RBP9.46□□□□□ -0.9
HLA-DQB1-208ENST00000484729 Q8N8P6 123 aa9.46□□□□□ -0.9
HLA-DQB1-208ENST00000484729 TMEM18Q96B42 140 aa9.46□□□□□ -0.9
HLA-DQB1-208ENST00000484729 NXT2Q9NPJ8 142 aaKnown RBP9.46□□□□□ -0.9
HLA-DQB1-208ENST00000484729 SPAG11BQ08648 103 aa9.45□□□□□ -0.9
HLA-DQB1-208ENST00000484729 SRSF9Q13242 221 aaKnown RBP eCLIP9.45□□□□□ -0.9
HLA-DQB1-208ENST00000484729 C2orf48Q96LS8 159 aa9.45□□□□□ -0.9
HLA-DQB1-208ENST00000484729 ALKBH7Q9BT30 221 aaPredicted RBP9.45□□□□□ -0.9
HLA-DQB1-208ENST00000484729 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
HLA-DQB1-208ENST00000484729 PRSS47A8MTI9 375 aa9.44□□□□□ -0.9
HLA-DQB1-208ENST00000484729 SCO1O75880 301 aa9.44□□□□□ -0.9
HLA-DQB1-208ENST00000484729 TIMM21Q9BVV7 248 aa9.44□□□□□ -0.9
HLA-DQB1-208ENST00000484729 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.43□□□□□ -0.9
HLA-DQB1-208ENST00000484729 ATP6V1G1O75348 118 aa9.43□□□□□ -0.9
HLA-DQB1-208ENST00000484729 IFI27P40305 119 aaPredicted RBP9.43□□□□□ -0.9
HLA-DQB1-208ENST00000484729 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
HLA-DQB1-208ENST00000484729 RPL39P62891 51 aaKnown RBP9.42□□□□□ -0.9
HLA-DQB1-208ENST00000484729 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
HLA-DQB1-208ENST00000484729 OPRPNQ99935 248 aaPredicted RBP9.42□□□□□ -0.9
HLA-DQB1-208ENST00000484729 K7EMI3 77 aa9.41□□□□□ -0.9
HLA-DQB1-208ENST00000484729 S100A1P23297 94 aa9.41□□□□□ -0.9
HLA-DQB1-208ENST00000484729 FA2HQ7L5A8 372 aa9.41□□□□□ -0.9
HLA-DQB1-208ENST00000484729 OR10D4PQ8NGN7 298 aa9.41□□□□□ -0.9
HLA-DQB1-208ENST00000484729 ORAOV1Q8WV07 137 aa9.41□□□□□ -0.9
HLA-DQB1-208ENST00000484729 SPANXA1Q9NS26 97 aa9.4□□□□□ -0.9
HLA-DQB1-208ENST00000484729 PSORS1C2Q9UIG4 136 aa9.4□□□□□ -0.9
HLA-DQB1-208ENST00000484729 MUC2Q02817 5179 aa9.4□□□□□ -0.9
HLA-DQB1-208ENST00000484729 IFITM10A6NMD0 228 aa9.39□□□□□ -0.91
HLA-DQB1-208ENST00000484729 PHF5AQ7RTV0 110 aaKnown RBP9.39□□□□□ -0.91
HLA-DQB1-208ENST00000484729 C18orf32Q8TCD1 76 aa9.39□□□□□ -0.91
HLA-DQB1-208ENST00000484729 CYSLTR1Q9Y271 337 aa9.39□□□□□ -0.91
HLA-DQB1-208ENST00000484729 COLCA2A8K830 154 aa9.38□□□□□ -0.91
HLA-DQB1-208ENST00000484729 RNF151Q2KHN1 245 aa9.38□□□□□ -0.91
HLA-DQB1-208ENST00000484729 C1orf137Q5JT78 98 aa9.38□□□□□ -0.91
HLA-DQB1-208ENST00000484729 C2orf66Q6UXQ4 117 aa9.38□□□□□ -0.91
HLA-DQB1-208ENST00000484729 NDUFA1O15239 70 aa9.37□□□□□ -0.91
HLA-DQB1-208ENST00000484729 TRGC2P03986 189 aa9.37□□□□□ -0.91
HLA-DQB1-208ENST00000484729 G0S2P27469 103 aa9.37□□□□□ -0.91
HLA-DQB1-208ENST00000484729 FAM104AQ969W3 186 aa9.37□□□□□ -0.91
HLA-DQB1-208ENST00000484729 MRPL35Q9NZE8 188 aaKnown RBP9.37□□□□□ -0.91
HLA-DQB1-208ENST00000484729 IGHV3OR16-9A0A0B4J2B5 98 aa9.36□□□□□ -0.91
HLA-DQB1-208ENST00000484729 KRTAP9-6A0A140TA67 174 aa9.36□□□□□ -0.91
HLA-DQB1-208ENST00000484729 MRPS36P82909 103 aaKnown RBP9.36□□□□□ -0.91
HLA-DQB1-208ENST00000484729 F8WDY8 70 aa9.35□□□□□ -0.91
HLA-DQB1-208ENST00000484729 RAB5BP61020 215 aa9.35□□□□□ -0.91
HLA-DQB1-208ENST00000484729 C10orf25Q5T742 122 aa9.35□□□□□ -0.91
HLA-DQB1-208ENST00000484729 LINC01546A6NGU7 62 aa9.34□□□□□ -0.91
HLA-DQB1-208ENST00000484729 Q6ZN92 141 aa9.34□□□□□ -0.91
HLA-DQB1-208ENST00000484729 A0A087WZ39 114 aa9.33□□□□□ -0.92
HLA-DQB1-208ENST00000484729 FAM168BA1KXE4 195 aa9.33□□□□□ -0.92
HLA-DQB1-208ENST00000484729 LINC00614P0C842 121 aa9.33□□□□□ -0.92
HLA-DQB1-208ENST00000484729 UNQ6190/PRO20217Q6UXQ8 127 aa9.33□□□□□ -0.92
HLA-DQB1-208ENST00000484729 FAM19A5Q7Z5A7 132 aaPredicted RBP9.33□□□□□ -0.92
HLA-DQB1-208ENST00000484729 BAGE3Q86Y29 109 aa9.33□□□□□ -0.92
HLA-DQB1-208ENST00000484729 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
HLA-DQB1-208ENST00000484729 TMEM141Q96I45 108 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms