RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 IGHV1-58A0A0C4DH39 117 aa12.1□□□□□ -0.47
NDUFA3-213ENST00000484103 VCYO14598 125 aa12.1□□□□□ -0.47
NDUFA3-213ENST00000484103 SUMO2P61956 95 aaKnown RBP12.1□□□□□ -0.47
NDUFA3-213ENST00000484103 RPL32P62910 135 aaKnown RBP12.1□□□□□ -0.47
NDUFA3-213ENST00000484103 FABP9Q0Z7S8 132 aa12.1□□□□□ -0.47
NDUFA3-213ENST00000484103 C20orf78Q9BR46 151 aa12.1□□□□□ -0.47
NDUFA3-213ENST00000484103 PRSS47A8MTI9 375 aa12.09□□□□□ -0.47
NDUFA3-213ENST00000484103 ZNF561-AS1K7EIQ3 104 aa12.09□□□□□ -0.47
NDUFA3-213ENST00000484103 MRPL52Q86TS9 123 aaKnown RBP12.09□□□□□ -0.47
NDUFA3-213ENST00000484103 ALKBH7Q9BT30 221 aaPredicted RBP12.09□□□□□ -0.47
NDUFA3-213ENST00000484103 TRAV13-1A0A0B4J241 112 aa12.08□□□□□ -0.48
NDUFA3-213ENST00000484103 MALP21145 153 aa12.08□□□□□ -0.48
NDUFA3-213ENST00000484103 CD164L2Q6UWJ8 174 aa12.08□□□□□ -0.48
NDUFA3-213ENST00000484103 Q6ZRU5 148 aa12.07□□□□□ -0.48
NDUFA3-213ENST00000484103 KIR2DL4Q99706 377 aa12.07□□□□□ -0.48
NDUFA3-213ENST00000484103 UBR4Q5T4S7 5183 aa12.06□□□□□ -0.48
NDUFA3-213ENST00000484103 MT1HL1P0DM35 61 aa12.06□□□□□ -0.48
NDUFA3-213ENST00000484103 SYCNQ0VAF6 134 aa12.06□□□□□ -0.48
NDUFA3-213ENST00000484103 Q6ZUT4 128 aa12.06□□□□□ -0.48
NDUFA3-213ENST00000484103 SMIM2Q9BVW6 85 aa12.06□□□□□ -0.48
NDUFA3-213ENST00000484103 UBE2D4Q9Y2X8 147 aa12.06□□□□□ -0.48
NDUFA3-213ENST00000484103 IGLV4-69A0A075B6H9 119 aa12.05□□□□□ -0.48
NDUFA3-213ENST00000484103 TRGC2P03986 189 aa12.05□□□□□ -0.48
NDUFA3-213ENST00000484103 C5orf38Q86SI9 138 aa12.05□□□□□ -0.48
NDUFA3-213ENST00000484103 MAP1LC3AQ9H492 121 aa12.05□□□□□ -0.48
NDUFA3-213ENST00000484103 COX7A2LO14548 114 aa12.04□□□□□ -0.48
NDUFA3-213ENST00000484103 PRR3P79522 188 aaKnown RBP12.04□□□□□ -0.48
NDUFA3-213ENST00000484103 GAGE2BQ13066 116 aa12.04□□□□□ -0.48
NDUFA3-213ENST00000484103 C1orf196B1AJZ1 125 aa12.03□□□□□ -0.48
NDUFA3-213ENST00000484103 RPL39P62891 51 aaKnown RBP12.02□□□□□ -0.49
NDUFA3-213ENST00000484103 Q8N8P6 123 aa12.01□□□□□ -0.49
NDUFA3-213ENST00000484103 C18orf32Q8TCD1 76 aa12.01□□□□□ -0.49
NDUFA3-213ENST00000484103 CAMK2N2Q96S95 79 aa12.01□□□□□ -0.49
NDUFA3-213ENST00000484103 LOC389332A0A1B0GUA5 103 aa12□□□□□ -0.49
NDUFA3-213ENST00000484103 SMAGPQ0VAQ4 97 aa12□□□□□ -0.49
NDUFA3-213ENST00000484103 ODF1Q14990 250 aa12□□□□□ -0.49
NDUFA3-213ENST00000484103 OPRPNQ99935 248 aaPredicted RBP12□□□□□ -0.49
NDUFA3-213ENST00000484103 NXT2Q9NPJ8 142 aaKnown RBP12□□□□□ -0.49
NDUFA3-213ENST00000484103 LINC00474Q9P2X8 69 aa12□□□□□ -0.49
NDUFA3-213ENST00000484103 A0A0J9YXV3 536 aa11.99□□□□□ -0.49
NDUFA3-213ENST00000484103 TCAPO15273 167 aa11.99□□□□□ -0.49
NDUFA3-213ENST00000484103 TMEM18Q96B42 140 aa11.99□□□□□ -0.49
NDUFA3-213ENST00000484103 PKIGQ9Y2B9 76 aa11.99□□□□□ -0.49
NDUFA3-213ENST00000484103 LINC01546A6NGU7 62 aa11.98□□□□□ -0.49
NDUFA3-213ENST00000484103 IFI27P40305 119 aaPredicted RBP11.98□□□□□ -0.49
NDUFA3-213ENST00000484103 PTTG1IPP53801 180 aa11.98□□□□□ -0.49
NDUFA3-213ENST00000484103 RPL18AQ02543 176 aaKnown RBP11.98□□□□□ -0.49
NDUFA3-213ENST00000484103 CSDC2Q9Y534 153 aaKnown RBP11.98□□□□□ -0.49
NDUFA3-213ENST00000484103 LOC107984640A0A0U1RRK4 108 aa11.97□□□□□ -0.49
NDUFA3-213ENST00000484103 K7EMI3 77 aa11.97□□□□□ -0.49
NDUFA3-213ENST00000484103 SPAG11BQ08648 103 aa11.97□□□□□ -0.49
NDUFA3-213ENST00000484103 URB1-AS1Q96HZ7 61 aa11.96□□□□□ -0.49
NDUFA3-213ENST00000484103 A0A1W2PNN7 141 aa11.94□□□□□ -0.5
NDUFA3-213ENST00000484103 APOMO95445 188 aa11.94□□□□□ -0.5
NDUFA3-213ENST00000484103 ORAOV1Q8WV07 137 aa11.94□□□□□ -0.5
NDUFA3-213ENST00000484103 TNXBP22105 4242 aa11.94□□□□□ -0.5
NDUFA3-213ENST00000484103 IFITM10A6NMD0 228 aa11.93□□□□□ -0.5
NDUFA3-213ENST00000484103 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
NDUFA3-213ENST00000484103 TIMM21Q9BVV7 248 aa11.93□□□□□ -0.5
NDUFA3-213ENST00000484103 HIST1H2BKO60814 126 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 HIST1H2BJP06899 126 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 HIST1H2BOP23527 126 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 HIST1H2BBP33778 126 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 HIST1H2BDP58876 126 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 HIST1H2BCP62807 126 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 HIST2H2BEQ16778 126 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 ORMDL2Q53FV1 153 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 Q6ZRP5 223 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 FA2HQ7L5A8 372 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 HIST1H2BHQ93079 126 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 HIST1H2BNQ99877 126 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 HIST1H2BMQ99879 126 aa11.92□□□□□ -0.5
NDUFA3-213ENST00000484103 LINC00614P0C842 121 aa11.91□□□□□ -0.5
NDUFA3-213ENST00000484103 RAB5BP61020 215 aa11.91□□□□□ -0.5
NDUFA3-213ENST00000484103 C9orf116Q5BN46 136 aaPredicted RBP11.91□□□□□ -0.5
NDUFA3-213ENST00000484103 FAM104AQ969W3 186 aa11.91□□□□□ -0.5
NDUFA3-213ENST00000484103 C2orf48Q96LS8 159 aa11.9□□□□□ -0.5
NDUFA3-213ENST00000484103 LINC01600Q96MT4 127 aa11.9□□□□□ -0.5
NDUFA3-213ENST00000484103 SPANXA1Q9NS26 97 aa11.9□□□□□ -0.5
NDUFA3-213ENST00000484103 LINC00310P59036 64 aa11.89□□□□□ -0.51
NDUFA3-213ENST00000484103 SPINK6Q6UWN8 80 aa11.89□□□□□ -0.51
NDUFA3-213ENST00000484103 PHF5AQ7RTV0 110 aaKnown RBP11.89□□□□□ -0.51
NDUFA3-213ENST00000484103 CHCHD1Q96BP2 118 aaKnown RBP11.89□□□□□ -0.51
NDUFA3-213ENST00000484103 BAGE3Q86Y29 109 aa11.88□□□□□ -0.51
NDUFA3-213ENST00000484103 A0A096LNJ9 63 aa11.87□□□□□ -0.51
NDUFA3-213ENST00000484103 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
NDUFA3-213ENST00000484103 REG3GQ6UW15 175 aa11.87□□□□□ -0.51
NDUFA3-213ENST00000484103 C2orf66Q6UXQ4 117 aa11.87□□□□□ -0.51
NDUFA3-213ENST00000484103 OR10D4PQ8NGN7 298 aa11.87□□□□□ -0.51
NDUFA3-213ENST00000484103 IGHV3OR16-9A0A0B4J2B5 98 aa11.86□□□□□ -0.51
NDUFA3-213ENST00000484103 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
NDUFA3-213ENST00000484103 CYSLTR1Q9Y271 337 aa11.86□□□□□ -0.51
NDUFA3-213ENST00000484103 FAM168BA1KXE4 195 aa11.85□□□□□ -0.51
NDUFA3-213ENST00000484103 NDUFA1O15239 70 aa11.85□□□□□ -0.51
NDUFA3-213ENST00000484103 SERF1AO75920 110 aa11.85□□□□□ -0.51
NDUFA3-213ENST00000484103 G0S2P27469 103 aa11.85□□□□□ -0.51
NDUFA3-213ENST00000484103 MRPS36P82909 103 aaKnown RBP11.85□□□□□ -0.51
NDUFA3-213ENST00000484103 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
NDUFA3-213ENST00000484103 TOMM6Q96B49 74 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms