RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 C1orf196B1AJZ1 125 aa5.83□□□□□ -1.48
COL8A1-207ENST00000483969 CDK2AP2O75956 126 aa5.83□□□□□ -1.48
COL8A1-207ENST00000483969 FUSP35637 526 aaKnown RBP eCLIP5.83□□□□□ -1.48
COL8A1-207ENST00000483969 IFI27P40305 119 aaPredicted RBP5.83□□□□□ -1.48
COL8A1-207ENST00000483969 ALKBH7Q9BT30 221 aaPredicted RBP5.83□□□□□ -1.48
COL8A1-207ENST00000483969 TRAPPC1Q9Y5R8 145 aa5.83□□□□□ -1.48
COL8A1-207ENST00000483969 FRAS1Q86XX4 4008 aa5.83□□□□□ -1.48
COL8A1-207ENST00000483969 PKD1P98161 4303 aa5.83□□□□□ -1.48
COL8A1-207ENST00000483969 TGIF2-C20orf24A0A0A6YYL0 155 aa5.82□□□□□ -1.48
COL8A1-207ENST00000483969 RPL39P62891 51 aaKnown RBP5.82□□□□□ -1.48
COL8A1-207ENST00000483969 MRPS36P82909 103 aaKnown RBP5.82□□□□□ -1.48
COL8A1-207ENST00000483969 CD164L2Q6UWJ8 174 aa5.82□□□□□ -1.48
COL8A1-207ENST00000483969 SMCO4Q9NRQ5 59 aa5.82□□□□□ -1.48
COL8A1-207ENST00000483969 CYSLTR1Q9Y271 337 aa5.82□□□□□ -1.48
COL8A1-207ENST00000483969 PYGO1Q9Y3Y4 419 aa5.82□□□□□ -1.48
COL8A1-207ENST00000483969 BIRC6Q9NR09 4857 aa5.81□□□□□ -1.48
COL8A1-207ENST00000483969 TRAV13-1A0A0B4J241 112 aa5.81□□□□□ -1.48
COL8A1-207ENST00000483969 LINC01549A6NIU2 74 aa5.81□□□□□ -1.48
COL8A1-207ENST00000483969 PRSS1P07477 247 aa5.81□□□□□ -1.48
COL8A1-207ENST00000483969 NPSP0C0P6 89 aa5.81□□□□□ -1.48
COL8A1-207ENST00000483969 XCL1P47992 114 aa5.81□□□□□ -1.48
COL8A1-207ENST00000483969 KRTAP10-1P60331 282 aa5.81□□□□□ -1.48
COL8A1-207ENST00000483969 HECTD4Q9Y4D8 3996 aa5.81□□□□□ -1.48
COL8A1-207ENST00000483969 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.8□□□□□ -1.48
COL8A1-207ENST00000483969 hDV102S1A0JD36 115 aa5.8□□□□□ -1.48
COL8A1-207ENST00000483969 PAPPA-AS1Q5QFB9 102 aa5.8□□□□□ -1.48
COL8A1-207ENST00000483969 C2orf66Q6UXQ4 117 aa5.8□□□□□ -1.48
COL8A1-207ENST00000483969 Q6ZN92 141 aa5.8□□□□□ -1.48
COL8A1-207ENST00000483969 Q6ZUT4 128 aa5.8□□□□□ -1.48
COL8A1-207ENST00000483969 FA2HQ7L5A8 372 aa5.8□□□□□ -1.48
COL8A1-207ENST00000483969 DNAH11Q96DT5 4516 aa5.79□□□□□ -1.48
COL8A1-207ENST00000483969 IGHV1-58A0A0C4DH39 117 aa5.79□□□□□ -1.48
COL8A1-207ENST00000483969 RNASE13Q5GAN3 156 aaKnown RBP5.79□□□□□ -1.48
COL8A1-207ENST00000483969 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.79□□□□□ -1.48
COL8A1-207ENST00000483969 TMEM141Q96I45 108 aa5.79□□□□□ -1.48
COL8A1-207ENST00000483969 OPRPNQ99935 248 aaPredicted RBP5.79□□□□□ -1.48
COL8A1-207ENST00000483969 VCX2Q9H322 139 aa5.79□□□□□ -1.48
COL8A1-207ENST00000483969 IGLV4-3A0A075B6K6 122 aa5.78□□□□□ -1.48
COL8A1-207ENST00000483969 IFITM10A6NMD0 228 aa5.78□□□□□ -1.48
COL8A1-207ENST00000483969 COX7A2LO14548 114 aa5.78□□□□□ -1.48
COL8A1-207ENST00000483969 APOMO95445 188 aa5.78□□□□□ -1.48
COL8A1-207ENST00000483969 RAB5BP61020 215 aa5.78□□□□□ -1.48
COL8A1-207ENST00000483969 CNBPP62633 177 aaKnown RBP5.78□□□□□ -1.48
COL8A1-207ENST00000483969 TEX43Q6ZNM6 134 aa5.78□□□□□ -1.48
COL8A1-207ENST00000483969 C9orf163Q8N9P6 203 aa5.78□□□□□ -1.48
COL8A1-207ENST00000483969 TOMM6Q96B49 74 aa5.78□□□□□ -1.48
COL8A1-207ENST00000483969 C2orf88Q9BSF0 95 aa5.78□□□□□ -1.48
COL8A1-207ENST00000483969 DYNC1H1Q14204 4646 aaKnown RBP5.78□□□□□ -1.48
COL8A1-207ENST00000483969 LINC01546A6NGU7 62 aa5.77□□□□□ -1.49
COL8A1-207ENST00000483969 IGIPA6NJ69 53 aa5.77□□□□□ -1.49
COL8A1-207ENST00000483969 LINC00614P0C842 121 aa5.77□□□□□ -1.49
COL8A1-207ENST00000483969 ERASQ7Z444 233 aa5.77□□□□□ -1.49
COL8A1-207ENST00000483969 C15orf56Q8N910 161 aa5.77□□□□□ -1.49
COL8A1-207ENST00000483969 FAM104AQ969W3 186 aa5.77□□□□□ -1.49
COL8A1-207ENST00000483969 YPEL4Q96NS1 127 aa5.77□□□□□ -1.49
COL8A1-207ENST00000483969 SCGB3A1Q96QR1 104 aa5.77□□□□□ -1.49
COL8A1-207ENST00000483969 TIMM17AQ99595 171 aa5.77□□□□□ -1.49
COL8A1-207ENST00000483969 GVQW2A0A096LPI5 108 aaPredicted RBP5.76□□□□□ -1.49
COL8A1-207ENST00000483969 XGP55808 180 aa5.76□□□□□ -1.49
COL8A1-207ENST00000483969 HIGD2BQ4VC39 106 aa5.76□□□□□ -1.49
COL8A1-207ENST00000483969 C5orf38Q86SI9 138 aa5.76□□□□□ -1.49
COL8A1-207ENST00000483969 CBLN2Q8IUK8 224 aa5.76□□□□□ -1.49
COL8A1-207ENST00000483969 C18orf32Q8TCD1 76 aa5.76□□□□□ -1.49
COL8A1-207ENST00000483969 IGHV3-64A0A075B6Q5 118 aa5.75□□□□□ -1.49
COL8A1-207ENST00000483969 IGHV3OR16-9A0A0B4J2B5 98 aa5.75□□□□□ -1.49
COL8A1-207ENST00000483969 SEC11AP67812 179 aa5.75□□□□□ -1.49
COL8A1-207ENST00000483969 LINC01620Q4KN68 170 aa5.75□□□□□ -1.49
COL8A1-207ENST00000483969 KRTAP5-11Q6L8G4 156 aa5.75□□□□□ -1.49
COL8A1-207ENST00000483969 AMELXQ99217 191 aa5.75□□□□□ -1.49
COL8A1-207ENST00000483969 UBE2D1P51668 147 aa5.74□□□□□ -1.49
COL8A1-207ENST00000483969 LINC00242Q5T6M2 205 aa5.74□□□□□ -1.49
COL8A1-207ENST00000483969 SDIM1Q6ZPB5 146 aa5.74□□□□□ -1.49
COL8A1-207ENST00000483969 Q6ZSA8 131 aa5.74□□□□□ -1.49
COL8A1-207ENST00000483969 DPH3Q96FX2 82 aa5.74□□□□□ -1.49
COL8A1-207ENST00000483969 PKIGQ9Y2B9 76 aa5.74□□□□□ -1.49
COL8A1-207ENST00000483969 F8WDY8 70 aa5.73□□□□□ -1.49
COL8A1-207ENST00000483969 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.73□□□□□ -1.49
COL8A1-207ENST00000483969 SYCNQ0VAF6 134 aa5.73□□□□□ -1.49
COL8A1-207ENST00000483969 LINC01561Q8N1V8 128 aa5.73□□□□□ -1.49
COL8A1-207ENST00000483969 OR10D4PQ8NGN7 298 aa5.73□□□□□ -1.49
COL8A1-207ENST00000483969 C2orf48Q96LS8 159 aa5.73□□□□□ -1.49
COL8A1-207ENST00000483969 CHAC1Q9BUX1 264 aa5.73□□□□□ -1.49
COL8A1-207ENST00000483969 IGLV4-69A0A075B6H9 119 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 IGKV2D-30A0A075B6S6 120 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 A0A087WZ39 114 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 COLCA2A8K830 154 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 HBDP02042 147 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 TRGC2P03986 189 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 HERVK_113P63121 156 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 COX6A2Q02221 97 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 ZC2HC1BQ5TFG8 222 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 LINC00173Q6ZV60 143 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 FAM19A3Q7Z5A8 133 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 ORAOV1Q8WV07 137 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 CHCHD1Q96BP2 118 aaKnown RBP5.72□□□□□ -1.49
COL8A1-207ENST00000483969 LINC00526Q96FQ7 95 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 CAMK2N2Q96S95 79 aa5.72□□□□□ -1.49
COL8A1-207ENST00000483969 GEMIN7Q9H840 131 aaKnown RBP5.72□□□□□ -1.49
COL8A1-207ENST00000483969 LRP1BQ9NZR2 4599 aa5.71□□□□□ -1.5
COL8A1-207ENST00000483969 EPM2AB3EWF7 344 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms