RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 IGHV3OR16-9A0A0B4J2B5 98 aa12.67□□□□□ -0.38
SNED1-210ENST00000483962 GCSHP23434 173 aa12.67□□□□□ -0.38
SNED1-210ENST00000483962 KRTAP10-1P60331 282 aa12.67□□□□□ -0.38
SNED1-210ENST00000483962 HIGD2BQ4VC39 106 aa12.67□□□□□ -0.38
SNED1-210ENST00000483962 LRP1BQ9NZR2 4599 aa12.66□□□□□ -0.38
SNED1-210ENST00000483962 IGHV1-58A0A0C4DH39 117 aa12.66□□□□□ -0.38
SNED1-210ENST00000483962 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.66□□□□□ -0.38
SNED1-210ENST00000483962 SERF1AO75920 110 aa12.66□□□□□ -0.38
SNED1-210ENST00000483962 SLPIP03973 132 aa12.66□□□□□ -0.38
SNED1-210ENST00000483962 FAM19A3Q7Z5A8 133 aa12.66□□□□□ -0.38
SNED1-210ENST00000483962 GVQW2A0A096LPI5 108 aaPredicted RBP12.65□□□□□ -0.38
SNED1-210ENST00000483962 HIST1H2BKO60814 126 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 HIST1H2BJP06899 126 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 HIST1H2BOP23527 126 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 HIST1H2BBP33778 126 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 HIST1H2BDP58876 126 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 HIST1H2BCP62807 126 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 HIST2H2BEQ16778 126 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 LINC01620Q4KN68 170 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.65□□□□□ -0.38
SNED1-210ENST00000483962 FAM19A2Q8N3H0 131 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 HIST1H2BHQ93079 126 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 HIST1H2BNQ99877 126 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 HIST1H2BMQ99879 126 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 CST9LQ9H4G1 147 aa12.65□□□□□ -0.38
SNED1-210ENST00000483962 NUPR1O60356 82 aa12.64□□□□□ -0.39
SNED1-210ENST00000483962 HSBP1O75506 76 aa12.64□□□□□ -0.39
SNED1-210ENST00000483962 MALP21145 153 aa12.64□□□□□ -0.39
SNED1-210ENST00000483962 A0A0J9YXV3 536 aa12.63□□□□□ -0.39
SNED1-210ENST00000483962 PMVKQ15126 192 aa12.63□□□□□ -0.39
SNED1-210ENST00000483962 LINC00526Q96FQ7 95 aa12.63□□□□□ -0.39
SNED1-210ENST00000483962 ATP5LO75964 103 aa12.62□□□□□ -0.39
SNED1-210ENST00000483962 CNBPP62633 177 aaKnown RBP12.62□□□□□ -0.39
SNED1-210ENST00000483962 A0A087WZ39 114 aa12.61□□□□□ -0.39
SNED1-210ENST00000483962 C9orf163Q8N9P6 203 aa12.6□□□□□ -0.39
SNED1-210ENST00000483962 IGHV3-64A0A075B6Q5 118 aa12.59□□□□□ -0.39
SNED1-210ENST00000483962 APOMO95445 188 aa12.59□□□□□ -0.39
SNED1-210ENST00000483962 NDUFA6P56556 154 aa12.59□□□□□ -0.39
SNED1-210ENST00000483962 HERVK_113P63121 156 aa12.58□□□□□ -0.4
SNED1-210ENST00000483962 SEC11AP67812 179 aa12.58□□□□□ -0.4
SNED1-210ENST00000483962 GEMIN7Q9H840 131 aaKnown RBP12.58□□□□□ -0.4
SNED1-210ENST00000483962 IGLV4-69A0A075B6H9 119 aa12.57□□□□□ -0.4
SNED1-210ENST00000483962 TINCRA0A1B0GVN0 87 aa12.57□□□□□ -0.4
SNED1-210ENST00000483962 ZNF561-AS1K7EIQ3 104 aa12.57□□□□□ -0.4
SNED1-210ENST00000483962 ORAOV1Q8WV07 137 aa12.57□□□□□ -0.4
SNED1-210ENST00000483962 IFI27L1Q96BM0 104 aa12.57□□□□□ -0.4
SNED1-210ENST00000483962 FAM30AQ9NZY2 134 aa12.57□□□□□ -0.4
SNED1-210ENST00000483962 CDKN2A-AS1Q9UH64 79 aa12.57□□□□□ -0.4
SNED1-210ENST00000483962 LINC01561Q8N1V8 128 aa12.56□□□□□ -0.4
SNED1-210ENST00000483962 OR10D4PQ8NGN7 298 aa12.56□□□□□ -0.4
SNED1-210ENST00000483962 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.55□□□□□ -0.4
SNED1-210ENST00000483962 SPAG11BQ08648 103 aa12.55□□□□□ -0.4
SNED1-210ENST00000483962 APOBP04114 4563 aaKnown RBP12.54□□□□□ -0.4
SNED1-210ENST00000483962 IGLV5-45A0A087WSX0 123 aa12.54□□□□□ -0.4
SNED1-210ENST00000483962 CDK2AP2O75956 126 aa12.54□□□□□ -0.4
SNED1-210ENST00000483962 LEPROTL1O95214 131 aa12.54□□□□□ -0.4
SNED1-210ENST00000483962 LINC00469Q8N7U9 141 aa12.54□□□□□ -0.4
SNED1-210ENST00000483962 DNAH8Q96JB1 4490 aa12.53□□□□□ -0.4
SNED1-210ENST00000483962 IGLC3P0DOY3 106 aa12.53□□□□□ -0.4
SNED1-210ENST00000483962 XGP55808 180 aa12.53□□□□□ -0.4
SNED1-210ENST00000483962 SYCNQ0VAF6 134 aa12.53□□□□□ -0.4
SNED1-210ENST00000483962 KIAA0087Q14695 138 aa12.53□□□□□ -0.4
SNED1-210ENST00000483962 SDIM1Q6ZPB5 146 aa12.53□□□□□ -0.4
SNED1-210ENST00000483962 Q6ZSA8 131 aa12.53□□□□□ -0.4
SNED1-210ENST00000483962 C2orf48Q96LS8 159 aa12.53□□□□□ -0.4
SNED1-210ENST00000483962 KIAA1109Q2LD37 5005 aa12.53□□□□□ -0.4
SNED1-210ENST00000483962 FABP4P15090 132 aa12.52□□□□□ -0.41
SNED1-210ENST00000483962 Q6ZRU5 148 aa12.52□□□□□ -0.41
SNED1-210ENST00000483962 CARD19Q96LW7 228 aa12.52□□□□□ -0.41
SNED1-210ENST00000483962 TRAV12-1A0A0B4J245 112 aa12.51□□□□□ -0.41
SNED1-210ENST00000483962 COA6Q5JTJ3 125 aaKnown RBP12.51□□□□□ -0.41
SNED1-210ENST00000483962 CHAC1Q9BUX1 264 aa12.51□□□□□ -0.41
SNED1-210ENST00000483962 HAMPP81172 84 aa12.5□□□□□ -0.41
SNED1-210ENST00000483962 CAMK2N2Q96S95 79 aa12.5□□□□□ -0.41
SNED1-210ENST00000483962 CHTOPQ9Y3Y2 248 aaKnown RBP12.5□□□□□ -0.41
SNED1-210ENST00000483962 C11orf86A6NJI1 115 aa12.49□□□□□ -0.41
SNED1-210ENST00000483962 SMIM1B2RUZ4 78 aa12.49□□□□□ -0.41
SNED1-210ENST00000483962 PACRGQ96M98 296 aaPredicted RBP12.49□□□□□ -0.41
SNED1-210ENST00000483962 HSPB8Q9UJY1 196 aa12.49□□□□□ -0.41
SNED1-210ENST00000483962 RYR1P21817 5038 aa12.49□□□□□ -0.41
SNED1-210ENST00000483962 SPINK8P0C7L1 97 aa12.48□□□□□ -0.41
SNED1-210ENST00000483962 ZNF22P17026 224 aaPredicted RBP12.48□□□□□ -0.41
SNED1-210ENST00000483962 C10orf25Q5T742 122 aa12.48□□□□□ -0.41
SNED1-210ENST00000483962 HSPG2P98160 4391 aa12.48□□□□□ -0.41
SNED1-210ENST00000483962 F8WDY8 70 aa12.47□□□□□ -0.41
SNED1-210ENST00000483962 PANO1I0J062 215 aa12.47□□□□□ -0.41
SNED1-210ENST00000483962 UNQ6190/PRO20217Q6UXQ8 127 aa12.47□□□□□ -0.41
SNED1-210ENST00000483962 MRPL35Q9NZE8 188 aaKnown RBP12.47□□□□□ -0.41
SNED1-210ENST00000483962 TOMM7Q9P0U1 55 aa12.47□□□□□ -0.41
SNED1-210ENST00000483962 H0Y8G0 127 aa12.46□□□□□ -0.41
SNED1-210ENST00000483962 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.46□□□□□ -0.41
SNED1-210ENST00000483962 F8VRH5 84 aa12.45□□□□□ -0.42
SNED1-210ENST00000483962 H3BRM9 83 aa12.45□□□□□ -0.42
SNED1-210ENST00000483962 NDUFA1O15239 70 aa12.45□□□□□ -0.42
SNED1-210ENST00000483962 ODF1Q14990 250 aa12.45□□□□□ -0.42
SNED1-210ENST00000483962 C2orf82Q6UX34 121 aa12.45□□□□□ -0.42
SNED1-210ENST00000483962 Q8IZM0 81 aa12.45□□□□□ -0.42
SNED1-210ENST00000483962 KRTAP17-1Q9BYP8 105 aa12.45□□□□□ -0.42
SNED1-210ENST00000483962 PRSS2P07478 247 aa12.44□□□□□ -0.42
SNED1-210ENST00000483962 CHTF8P0CG12 524 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms