RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ZNF861PO60384 105 aa7.55□□□□□ -1.2
UBR4-213ENST00000483922 FCER1GP30273 86 aa7.55□□□□□ -1.2
UBR4-213ENST00000483922 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
UBR4-213ENST00000483922 UBE2BP63146 152 aa7.54□□□□□ -1.2
UBR4-213ENST00000483922 RGS21Q2M5E4 152 aa7.54□□□□□ -1.2
UBR4-213ENST00000483922 CT83Q5H943 113 aa7.54□□□□□ -1.2
UBR4-213ENST00000483922 FSIP2Q5CZC0 6907 aa7.53□□□□□ -1.2
UBR4-213ENST00000483922 C2orf82Q6UX34 121 aa7.53□□□□□ -1.2
UBR4-213ENST00000483922 MRPL51Q4U2R6 128 aaKnown RBP7.52□□□□□ -1.21
UBR4-213ENST00000483922 RETNLBQ9BQ08 111 aa7.52□□□□□ -1.21
UBR4-213ENST00000483922 ANAPC11Q9NYG5 84 aa7.52□□□□□ -1.21
UBR4-213ENST00000483922 TMEM250H0YL14 139 aa7.5□□□□□ -1.21
UBR4-213ENST00000483922 TAGLN2P37802 199 aaKnown RBP7.5□□□□□ -1.21
UBR4-213ENST00000483922 KRTAP13-2Q52LG2 175 aa7.5□□□□□ -1.21
UBR4-213ENST00000483922 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
UBR4-213ENST00000483922 CTDSP1Q9GZU7 261 aa7.5□□□□□ -1.21
UBR4-213ENST00000483922 BATF3Q9NR55 127 aa7.5□□□□□ -1.21
UBR4-213ENST00000483922 C22orf24Q9Y442 160 aa7.5□□□□□ -1.21
UBR4-213ENST00000483922 TRBV24-1A0A075B6N3 115 aa7.49□□□□□ -1.21
UBR4-213ENST00000483922 NDUFC2-KCTD14E9PQ53 114 aa7.49□□□□□ -1.21
UBR4-213ENST00000483922 MRPS36P82909 103 aaKnown RBP7.49□□□□□ -1.21
UBR4-213ENST00000483922 SMAGPQ0VAQ4 97 aa7.49□□□□□ -1.21
UBR4-213ENST00000483922 LINC00242Q5T6M2 205 aa7.49□□□□□ -1.21
UBR4-213ENST00000483922 FAM104BQ5XKR9 115 aa7.49□□□□□ -1.21
UBR4-213ENST00000483922 LINC01551Q86U37 167 aa7.49□□□□□ -1.21
UBR4-213ENST00000483922 BORCS7Q96B45 105 aa7.49□□□□□ -1.21
UBR4-213ENST00000483922 V9GYV3 84 aa7.49□□□□□ -1.21
UBR4-213ENST00000483922 TRBV30A0A0K0K1B3 111 aa7.48□□□□□ -1.21
UBR4-213ENST00000483922 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
UBR4-213ENST00000483922 OSTCQ9NRP0 149 aa7.48□□□□□ -1.21
UBR4-213ENST00000483922 IFITM10A6NMD0 228 aa7.47□□□□□ -1.21
UBR4-213ENST00000483922 TCAPO15273 167 aa7.47□□□□□ -1.21
UBR4-213ENST00000483922 CEBPGP53567 150 aa7.47□□□□□ -1.21
UBR4-213ENST00000483922 RPL32P62910 135 aaKnown RBP7.47□□□□□ -1.21
UBR4-213ENST00000483922 TYMSOSQ8TAI1 123 aa7.47□□□□□ -1.21
UBR4-213ENST00000483922 TMEM18Q96B42 140 aa7.47□□□□□ -1.21
UBR4-213ENST00000483922 C20orf78Q9BR46 151 aa7.47□□□□□ -1.21
UBR4-213ENST00000483922 PPP1R2P9O14990 202 aa7.46□□□□□ -1.22
UBR4-213ENST00000483922 TNFRSF6BO95407 300 aa7.46□□□□□ -1.22
UBR4-213ENST00000483922 PPP1R17O96001 155 aa7.46□□□□□ -1.22
UBR4-213ENST00000483922 HBBP68871 147 aa7.46□□□□□ -1.22
UBR4-213ENST00000483922 RIGQ13278 110 aa7.46□□□□□ -1.22
UBR4-213ENST00000483922 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.22
UBR4-213ENST00000483922 SPANXA1Q9NS26 97 aa7.46□□□□□ -1.22
UBR4-213ENST00000483922 ZNF727A8MUV8 499 aa7.45□□□□□ -1.22
UBR4-213ENST00000483922 NUPR1O60356 82 aa7.45□□□□□ -1.22
UBR4-213ENST00000483922 CRYGAP11844 174 aa7.45□□□□□ -1.22
UBR4-213ENST00000483922 ZC2HC1BQ5TFG8 222 aa7.45□□□□□ -1.22
UBR4-213ENST00000483922 SLC51BQ86UW2 128 aa7.45□□□□□ -1.22
UBR4-213ENST00000483922 XAGE1AQ9HD64 81 aa7.45□□□□□ -1.22
UBR4-213ENST00000483922 IGLV4-3A0A075B6K6 122 aa7.44□□□□□ -1.22
UBR4-213ENST00000483922 LINC00862A6NCI5 91 aa7.44□□□□□ -1.22
UBR4-213ENST00000483922 TPRXLQ17RH7 258 aa7.44□□□□□ -1.22
UBR4-213ENST00000483922 SMIM7Q9BQ49 75 aa7.44□□□□□ -1.22
UBR4-213ENST00000483922 SMIM2Q9BVW6 85 aa7.44□□□□□ -1.22
UBR4-213ENST00000483922 TGIF2-C20orf24A0A0A6YYL0 155 aa7.43□□□□□ -1.22
UBR4-213ENST00000483922 NPYP01303 97 aa7.43□□□□□ -1.22
UBR4-213ENST00000483922 KRTAP4-1Q9BYQ7 146 aa7.43□□□□□ -1.22
UBR4-213ENST00000483922 CDIP1Q9H305 208 aa7.43□□□□□ -1.22
UBR4-213ENST00000483922 BCE1O60756 84 aa7.42□□□□□ -1.22
UBR4-213ENST00000483922 SRP19P09132 144 aaKnown RBP7.42□□□□□ -1.22
UBR4-213ENST00000483922 CKS2P33552 79 aa7.42□□□□□ -1.22
UBR4-213ENST00000483922 KRTAP13-1Q8IUC0 172 aa7.42□□□□□ -1.22
UBR4-213ENST00000483922 PACRGQ96M98 296 aaPredicted RBP7.42□□□□□ -1.22
UBR4-213ENST00000483922 CRCT1Q9UGL9 99 aa7.42□□□□□ -1.22
UBR4-213ENST00000483922 SMIM27A0A1W2PRY6 76 aa7.41□□□□□ -1.22
UBR4-213ENST00000483922 D6R8Y8 96 aa7.41□□□□□ -1.22
UBR4-213ENST00000483922 FAM74A3Q4VXF1 159 aa7.41□□□□□ -1.22
UBR4-213ENST00000483922 LINC00173Q6ZV60 143 aa7.41□□□□□ -1.22
UBR4-213ENST00000483922 LINC00167Q96N53 147 aa7.41□□□□□ -1.22
UBR4-213ENST00000483922 NAT8BQ9UHF3 227 aa7.41□□□□□ -1.22
UBR4-213ENST00000483922 PYGO1Q9Y3Y4 419 aa7.41□□□□□ -1.22
UBR4-213ENST00000483922 IGLV7-46A0A075B6I9 117 aa7.4□□□□□ -1.22
UBR4-213ENST00000483922 RPL37AP8A6NKH3 93 aa7.4□□□□□ -1.22
UBR4-213ENST00000483922 RPL28P46779 137 aaKnown RBP7.4□□□□□ -1.22
UBR4-213ENST00000483922 LBHQ53QV2 105 aaPredicted RBP7.4□□□□□ -1.22
UBR4-213ENST00000483922 MRPL55Q7Z7F7 128 aaKnown RBP7.4□□□□□ -1.22
UBR4-213ENST00000483922 LINC01561Q8N1V8 128 aa7.4□□□□□ -1.22
UBR4-213ENST00000483922 RPL23P62829 140 aaKnown RBP7.39□□□□□ -1.23
UBR4-213ENST00000483922 ALKAL2Q6UX46 152 aa7.39□□□□□ -1.23
UBR4-213ENST00000483922 TCTE3Q8IZS6 198 aa7.39□□□□□ -1.23
UBR4-213ENST00000483922 TP73-AS1Q9UF72 201 aa7.39□□□□□ -1.23
UBR4-213ENST00000483922 LINC00304Q8N9R0 145 aa7.38□□□□□ -1.23
UBR4-213ENST00000483922 EIF5A2Q9GZV4 153 aaKnown RBP7.38□□□□□ -1.23
UBR4-213ENST00000483922 TOMM7Q9P0U1 55 aa7.38□□□□□ -1.23
UBR4-213ENST00000483922 A0A1B0GXF2 115 aa7.37□□□□□ -1.23
UBR4-213ENST00000483922 C9JQL5 133 aa7.37□□□□□ -1.23
UBR4-213ENST00000483922 IFI27P40305 119 aaPredicted RBP7.37□□□□□ -1.23
UBR4-213ENST00000483922 BLOC1S1P78537 153 aa7.37□□□□□ -1.23
UBR4-213ENST00000483922 TMEM141Q96I45 108 aa7.37□□□□□ -1.23
UBR4-213ENST00000483922 AMELXQ99217 191 aa7.37□□□□□ -1.23
UBR4-213ENST00000483922 GAGE10A6NGK3 116 aa7.36□□□□□ -1.23
UBR4-213ENST00000483922 C6orf226Q5I0X4 101 aa7.36□□□□□ -1.23
UBR4-213ENST00000483922 Q6ZN92 141 aa7.36□□□□□ -1.23
UBR4-213ENST00000483922 FAM19A3Q7Z5A8 133 aa7.36□□□□□ -1.23
UBR4-213ENST00000483922 PPDPFQ9H3Y8 114 aa7.36□□□□□ -1.23
UBR4-213ENST00000483922 CKS1BP61024 79 aa7.35□□□□□ -1.23
UBR4-213ENST00000483922 FAM229BQ4G0N7 80 aa7.35□□□□□ -1.23
UBR4-213ENST00000483922 MRPL54Q6P161 138 aaKnown RBP7.35□□□□□ -1.23
UBR4-213ENST00000483922 C2orf66Q6UXQ4 117 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms