RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 SDIM1Q6ZPB5 146 aa8.61□□□□□ -1.03
SSR1-208ENST00000483409 FA2HQ7L5A8 372 aa8.61□□□□□ -1.03
SSR1-208ENST00000483409 CBLN2Q8IUK8 224 aa8.61□□□□□ -1.03
SSR1-208ENST00000483409 SMCO4Q9NRQ5 59 aa8.61□□□□□ -1.03
SSR1-208ENST00000483409 ZNF561-AS1K7EIQ3 104 aa8.6□□□□□ -1.03
SSR1-208ENST00000483409 G0S2P27469 103 aa8.6□□□□□ -1.03
SSR1-208ENST00000483409 LINC00173Q6ZV60 143 aa8.6□□□□□ -1.03
SSR1-208ENST00000483409 TOMM6Q96B49 74 aa8.6□□□□□ -1.03
SSR1-208ENST00000483409 C2orf88Q9BSF0 95 aa8.6□□□□□ -1.03
SSR1-208ENST00000483409 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.6□□□□□ -1.03
SSR1-208ENST00000483409 IGHV3OR16-9A0A0B4J2B5 98 aa8.59□□□□□ -1.03
SSR1-208ENST00000483409 LINC01546A6NGU7 62 aa8.59□□□□□ -1.03
SSR1-208ENST00000483409 PANO1I0J062 215 aa8.59□□□□□ -1.03
SSR1-208ENST00000483409 APOMO95445 188 aa8.59□□□□□ -1.03
SSR1-208ENST00000483409 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
SSR1-208ENST00000483409 CIRBP-AS1Q8TBR5 109 aa8.59□□□□□ -1.03
SSR1-208ENST00000483409 AMELXQ99217 191 aa8.59□□□□□ -1.03
SSR1-208ENST00000483409 VCX2Q9H322 139 aa8.59□□□□□ -1.03
SSR1-208ENST00000483409 PCLOQ9Y6V0 5065 aa8.59□□□□□ -1.03
SSR1-208ENST00000483409 ABCA13Q86UQ4 5058 aa8.58□□□□□ -1.04
SSR1-208ENST00000483409 IGLV4-69A0A075B6H9 119 aa8.58□□□□□ -1.04
SSR1-208ENST00000483409 NPSP0C0P6 89 aa8.58□□□□□ -1.04
SSR1-208ENST00000483409 UBE2D1P51668 147 aa8.58□□□□□ -1.04
SSR1-208ENST00000483409 COX6A2Q02221 97 aa8.58□□□□□ -1.04
SSR1-208ENST00000483409 LINC00242Q5T6M2 205 aa8.58□□□□□ -1.04
SSR1-208ENST00000483409 C18orf32Q8TCD1 76 aa8.58□□□□□ -1.04
SSR1-208ENST00000483409 CARD19Q96LW7 228 aa8.58□□□□□ -1.04
SSR1-208ENST00000483409 SCGB3A1Q96QR1 104 aa8.58□□□□□ -1.04
SSR1-208ENST00000483409 TIMM17AQ99595 171 aa8.58□□□□□ -1.04
SSR1-208ENST00000483409 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
SSR1-208ENST00000483409 FAM229AH3BQW9 127 aa8.57□□□□□ -1.04
SSR1-208ENST00000483409 SPAG11BQ08648 103 aa8.57□□□□□ -1.04
SSR1-208ENST00000483409 SYCNQ0VAF6 134 aa8.57□□□□□ -1.04
SSR1-208ENST00000483409 LINC00528Q8N1L1 170 aa8.57□□□□□ -1.04
SSR1-208ENST00000483409 ORAOV1Q8WV07 137 aa8.57□□□□□ -1.04
SSR1-208ENST00000483409 PAPPA-AS1Q5QFB9 102 aa8.56□□□□□ -1.04
SSR1-208ENST00000483409 ERASQ7Z444 233 aa8.56□□□□□ -1.04
SSR1-208ENST00000483409 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
SSR1-208ENST00000483409 IGKV2-24A0A0C4DH68 120 aa8.55□□□□□ -1.04
SSR1-208ENST00000483409 Q6ZRU5 148 aa8.55□□□□□ -1.04
SSR1-208ENST00000483409 OR10D4PQ8NGN7 298 aa8.55□□□□□ -1.04
SSR1-208ENST00000483409 CAMK2N2Q96S95 79 aa8.55□□□□□ -1.04
SSR1-208ENST00000483409 A0A087WZ39 114 aa8.54□□□□□ -1.04
SSR1-208ENST00000483409 LINC00614P0C842 121 aa8.54□□□□□ -1.04
SSR1-208ENST00000483409 CIRBPQ14011 172 aaKnown RBP8.54□□□□□ -1.04
SSR1-208ENST00000483409 PMCHL1Q16048 86 aa8.54□□□□□ -1.04
SSR1-208ENST00000483409 SPACA4Q8TDM5 124 aa8.54□□□□□ -1.04
SSR1-208ENST00000483409 DPH3Q96FX2 82 aa8.54□□□□□ -1.04
SSR1-208ENST00000483409 C2orf48Q96LS8 159 aa8.54□□□□□ -1.04
SSR1-208ENST00000483409 A0A096LNI7 61 aa8.53□□□□□ -1.04
SSR1-208ENST00000483409 LINC01549A6NIU2 74 aa8.53□□□□□ -1.04
SSR1-208ENST00000483409 A0A087WYN8 130 aa8.52□□□□□ -1.05
SSR1-208ENST00000483409 A0A096LNJ9 63 aa8.52□□□□□ -1.05
SSR1-208ENST00000483409 RAB5BP61020 215 aa8.52□□□□□ -1.05
SSR1-208ENST00000483409 MAJINQ3KP22 176 aa8.52□□□□□ -1.05
SSR1-208ENST00000483409 FAM19A3Q7Z5A8 133 aa8.52□□□□□ -1.05
SSR1-208ENST00000483409 GEMIN7Q9H840 131 aaKnown RBP8.52□□□□□ -1.05
SSR1-208ENST00000483409 A0A0J9YXV3 536 aa8.51□□□□□ -1.05
SSR1-208ENST00000483409 HBDP02042 147 aa8.51□□□□□ -1.05
SSR1-208ENST00000483409 HERVK_113P63121 156 aa8.51□□□□□ -1.05
SSR1-208ENST00000483409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.5□□□□□ -1.05
SSR1-208ENST00000483409 NDUFA1O15239 70 aa8.5□□□□□ -1.05
SSR1-208ENST00000483409 TRGC2P03986 189 aa8.5□□□□□ -1.05
SSR1-208ENST00000483409 PLA2G1BP04054 148 aaKnown RBP8.5□□□□□ -1.05
SSR1-208ENST00000483409 INAFM2P0DMQ5 153 aa8.5□□□□□ -1.05
SSR1-208ENST00000483409 SEC11AP67812 179 aa8.5□□□□□ -1.05
SSR1-208ENST00000483409 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
SSR1-208ENST00000483409 CST9LQ9H4G1 147 aa8.5□□□□□ -1.05
SSR1-208ENST00000483409 CDKN2A-AS1Q9UH64 79 aa8.5□□□□□ -1.05
SSR1-208ENST00000483409 PKIGQ9Y2B9 76 aa8.5□□□□□ -1.05
SSR1-208ENST00000483409 LOC107984640A0A0U1RRK4 108 aa8.49□□□□□ -1.05
SSR1-208ENST00000483409 NDUFA6P56556 154 aa8.49□□□□□ -1.05
SSR1-208ENST00000483409 GAGE2BQ13066 116 aa8.49□□□□□ -1.05
SSR1-208ENST00000483409 KIAA0087Q14695 138 aa8.49□□□□□ -1.05
SSR1-208ENST00000483409 PMVKQ15126 192 aa8.49□□□□□ -1.05
SSR1-208ENST00000483409 C10orf25Q5T742 122 aa8.49□□□□□ -1.05
SSR1-208ENST00000483409 UNQ6190/PRO20217Q6UXQ8 127 aa8.49□□□□□ -1.05
SSR1-208ENST00000483409 STPG4Q8N801 248 aa8.49□□□□□ -1.05
SSR1-208ENST00000483409 F8WDY8 70 aa8.48□□□□□ -1.05
SSR1-208ENST00000483409 SCO1O75880 301 aa8.48□□□□□ -1.05
SSR1-208ENST00000483409 PTTG1IPP53801 180 aa8.48□□□□□ -1.05
SSR1-208ENST00000483409 RPL18AQ02543 176 aaKnown RBP8.48□□□□□ -1.05
SSR1-208ENST00000483409 PDZD11Q5EBL8 140 aa8.48□□□□□ -1.05
SSR1-208ENST00000483409 LINC00469Q8N7U9 141 aa8.48□□□□□ -1.05
SSR1-208ENST00000483409 PACRGQ96M98 296 aaPredicted RBP8.48□□□□□ -1.05
SSR1-208ENST00000483409 MRPL35Q9NZE8 188 aaKnown RBP8.48□□□□□ -1.05
SSR1-208ENST00000483409 PLAC8Q9NZF1 115 aa8.48□□□□□ -1.05
SSR1-208ENST00000483409 TOMM7Q9P0U1 55 aa8.48□□□□□ -1.05
SSR1-208ENST00000483409 SRRM2Q9UQ35 2752 aaKnown RBP8.48□□□□□ -1.05
SSR1-208ENST00000483409 TINCRA0A1B0GVN0 87 aa8.47□□□□□ -1.05
SSR1-208ENST00000483409 COLCA2A8K830 154 aa8.47□□□□□ -1.05
SSR1-208ENST00000483409 RNF151Q2KHN1 245 aa8.47□□□□□ -1.05
SSR1-208ENST00000483409 C2orf82Q6UX34 121 aa8.47□□□□□ -1.05
SSR1-208ENST00000483409 BAGE3Q86Y29 109 aa8.47□□□□□ -1.05
SSR1-208ENST00000483409 CHCHD1Q96BP2 118 aaKnown RBP8.47□□□□□ -1.05
SSR1-208ENST00000483409 LINC00474Q9P2X8 69 aa8.47□□□□□ -1.05
SSR1-208ENST00000483409 C6orf48Q9UBA6 75 aa8.47□□□□□ -1.05
SSR1-208ENST00000483409 PRSS2P07478 247 aa8.46□□□□□ -1.06
SSR1-208ENST00000483409 RPL37AP61513 92 aaKnown RBP8.46□□□□□ -1.06
SSR1-208ENST00000483409 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms