RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 SLPIP03973 132 aa5.62□□□□□ -1.51
COL4A5-205ENST00000483338 MIFP14174 115 aa5.62□□□□□ -1.51
COL4A5-205ENST00000483338 DEFB1P60022 68 aa5.62□□□□□ -1.51
COL4A5-205ENST00000483338 Q9H8V8 135 aa5.62□□□□□ -1.51
COL4A5-205ENST00000483338 ADGRG4Q8IZF6 3080 aa5.62□□□□□ -1.51
COL4A5-205ENST00000483338 IGKV2-29A2NJV5 120 aaPredicted RBP5.62□□□□□ -1.51
COL4A5-205ENST00000483338 DAD1P61803 113 aa5.62□□□□□ -1.51
COL4A5-205ENST00000483338 LAMTOR3Q9UHA4 124 aa5.62□□□□□ -1.51
COL4A5-205ENST00000483338 RELNP78509 3460 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 USP9YO00507 2555 aaPredicted RBP5.61□□□□□ -1.51
COL4A5-205ENST00000483338 RBM12B-AS1Q9P1G2 102 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 CDKN2A-AS1Q9UH64 79 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 LENEPQ9Y5L5 61 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 LRRK2Q5S007 2527 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 TRBV7-4A0A0J9YYF1 115 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 OVOL2Q9BRP0 275 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 LECT2O14960 151 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 IGLV1-47P01700 117 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 LINC00337Q8N6G1 96 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 C11orf45Q8TAV5 145 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 TM2D3Q9BRN9 247 aa5.61□□□□□ -1.51
COL4A5-205ENST00000483338 FAM215AQ9Y5M1 114 aa5.6□□□□□ -1.51
COL4A5-205ENST00000483338 IGLV3-9A0A075B6K5 115 aa5.6□□□□□ -1.51
COL4A5-205ENST00000483338 SMIM11BQ8TCY0 68 aa5.6□□□□□ -1.51
COL4A5-205ENST00000483338 Q9UF83 564 aa5.6□□□□□ -1.51
COL4A5-205ENST00000483338 IGKV3-20P01619 116 aa5.59□□□□□ -1.51
COL4A5-205ENST00000483338 CCDC168Q8NDH2 2452 aa5.59□□□□□ -1.51
COL4A5-205ENST00000483338 ITLN2Q8WWU7 325 aaPredicted RBP5.59□□□□□ -1.51
COL4A5-205ENST00000483338 UBL5Q9BZL1 73 aa5.59□□□□□ -1.51
COL4A5-205ENST00000483338 Q6ZTI0 123 aa5.59□□□□□ -1.52
COL4A5-205ENST00000483338 BBC3Q96PG8 261 aaPredicted RBP5.59□□□□□ -1.52
COL4A5-205ENST00000483338 IGKV2-28A0A075B6P5 120 aa5.58□□□□□ -1.52
COL4A5-205ENST00000483338 IGKV2D-28P01615 120 aa5.58□□□□□ -1.52
COL4A5-205ENST00000483338 CRPP02741 224 aa5.58□□□□□ -1.52
COL4A5-205ENST00000483338 SEM1Q6ZVN7 128 aa5.58□□□□□ -1.52
COL4A5-205ENST00000483338 ORMDL1Q9P0S3 153 aa5.58□□□□□ -1.52
COL4A5-205ENST00000483338 PF4P02776 101 aa5.58□□□□□ -1.52
COL4A5-205ENST00000483338 KLK9Q9UKQ9 250 aa5.58□□□□□ -1.52
COL4A5-205ENST00000483338 USP9XQ93008 2570 aaPredicted RBP5.58□□□□□ -1.52
COL4A5-205ENST00000483338 Q6ZTC4 211 aa5.57□□□□□ -1.52
COL4A5-205ENST00000483338 RNF5Q99942 180 aa5.57□□□□□ -1.52
COL4A5-205ENST00000483338 CLEC19AQ6UXS0 136 aa5.57□□□□□ -1.52
COL4A5-205ENST00000483338 IGLV5-39A0A0G2JS06 123 aa5.57□□□□□ -1.52
COL4A5-205ENST00000483338 F6UB75 175 aa5.57□□□□□ -1.52
COL4A5-205ENST00000483338 H0YGX0 51 aa5.57□□□□□ -1.52
COL4A5-205ENST00000483338 Q6ZRP5 223 aa5.57□□□□□ -1.52
COL4A5-205ENST00000483338 IGHV1OR15-1A0A075B7D0 117 aa5.56□□□□□ -1.52
COL4A5-205ENST00000483338 A8MU10 97 aa5.56□□□□□ -1.52
COL4A5-205ENST00000483338 IGHV3-11P01762 117 aa5.56□□□□□ -1.52
COL4A5-205ENST00000483338 RPL36AP83881 106 aaKnown RBP5.56□□□□□ -1.52
COL4A5-205ENST00000483338 COX6A2Q02221 97 aa5.56□□□□□ -1.52
COL4A5-205ENST00000483338 LY6EQ16553 131 aa5.56□□□□□ -1.52
COL4A5-205ENST00000483338 TMEM254Q8TBM7 123 aa5.56□□□□□ -1.52
COL4A5-205ENST00000483338 RPL36ALQ969Q0 106 aaKnown RBP5.56□□□□□ -1.52
COL4A5-205ENST00000483338 DPM3Q9P2X0 92 aa5.56□□□□□ -1.52
COL4A5-205ENST00000483338 IGLV5-45A0A087WSX0 123 aa5.56□□□□□ -1.52
COL4A5-205ENST00000483338 LINC01547P58512 204 aaPredicted RBP5.56□□□□□ -1.52
COL4A5-205ENST00000483338 ZNF843Q8N446 348 aa5.56□□□□□ -1.52
COL4A5-205ENST00000483338 IGHV3-38A0A0C4DH36 116 aa5.56□□□□□ -1.52
COL4A5-205ENST00000483338 E7EQL1 145 aa5.55□□□□□ -1.52
COL4A5-205ENST00000483338 UBE2E2Q96LR5 201 aa5.55□□□□□ -1.52
COL4A5-205ENST00000483338 LAMA5O15230 3695 aa5.55□□□□□ -1.52
COL4A5-205ENST00000483338 LRCOL1A6NCL2 159 aa5.55□□□□□ -1.52
COL4A5-205ENST00000483338 Q1T7F1 81 aa5.55□□□□□ -1.52
COL4A5-205ENST00000483338 Q8N3U1 123 aa5.55□□□□□ -1.52
COL4A5-205ENST00000483338 ABCA2Q9BZC7 2435 aa5.55□□□□□ -1.52
COL4A5-205ENST00000483338 IGSF10Q6WRI0 2623 aa5.55□□□□□ -1.52
COL4A5-205ENST00000483338 CHD6Q8TD26 2715 aa5.55□□□□□ -1.52
COL4A5-205ENST00000483338 GRNP28799 593 aaKnown RBP5.55□□□□□ -1.52
COL4A5-205ENST00000483338 CCDC140Q96MF4 163 aa5.55□□□□□ -1.52
COL4A5-205ENST00000483338 POLQO75417 2590 aa5.55□□□□□ -1.52
COL4A5-205ENST00000483338 JMJD7-PLA2G4BH0Y9G9 81 aa5.54□□□□□ -1.52
COL4A5-205ENST00000483338 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
COL4A5-205ENST00000483338 CENPEQ02224 2701 aa5.54□□□□□ -1.52
COL4A5-205ENST00000483338 PSPHP1O15172 72 aa5.54□□□□□ -1.52
COL4A5-205ENST00000483338 FUSP35637 526 aaKnown RBP eCLIP5.54□□□□□ -1.52
COL4A5-205ENST00000483338 KHDC1LQ5JSQ8 128 aa5.54□□□□□ -1.52
COL4A5-205ENST00000483338 NPBQ8NG41 125 aa5.54□□□□□ -1.52
COL4A5-205ENST00000483338 SVEP1Q4LDE5 3571 aa5.54□□□□□ -1.52
COL4A5-205ENST00000483338 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.54□□□□□ -1.52
COL4A5-205ENST00000483338 C11orf68Q9H3H3 251 aaKnown RBP5.54□□□□□ -1.52
COL4A5-205ENST00000483338 HAMPP81172 84 aa5.53□□□□□ -1.52
COL4A5-205ENST00000483338 NREPQ16612 68 aa5.53□□□□□ -1.52
COL4A5-205ENST00000483338 SMIM1B2RUZ4 78 aa5.53□□□□□ -1.52
COL4A5-205ENST00000483338 APOC4P55056 127 aa5.53□□□□□ -1.52
COL4A5-205ENST00000483338 CHCHD7Q9BUK0 85 aa5.53□□□□□ -1.52
COL4A5-205ENST00000483338 SND1-IT1Q9HBX3 110 aa5.53□□□□□ -1.52
COL4A5-205ENST00000483338 G3V318 75 aa5.53□□□□□ -1.52
COL4A5-205ENST00000483338 J3QKU1 62 aa5.53□□□□□ -1.52
COL4A5-205ENST00000483338 hDV103S1A0JD37 113 aa5.52□□□□□ -1.53
COL4A5-205ENST00000483338 M0R2N4 97 aa5.52□□□□□ -1.53
COL4A5-205ENST00000483338 PRYO14603 147 aa5.52□□□□□ -1.53
COL4A5-205ENST00000483338 LINC00588Q9Y4M8 146 aa5.52□□□□□ -1.53
COL4A5-205ENST00000483338 IGHV3-16A0A0C4DH30 117 aa5.52□□□□□ -1.53
COL4A5-205ENST00000483338 DYNLRB2Q8TF09 96 aa5.52□□□□□ -1.53
COL4A5-205ENST00000483338 LINC00467Q9BRT7 94 aa5.52□□□□□ -1.53
COL4A5-205ENST00000483338 KLLNB2CW77 178 aa5.51□□□□□ -1.53
COL4A5-205ENST00000483338 K7EQG2 157 aa5.51□□□□□ -1.53
COL4A5-205ENST00000483338 M0R378 163 aa5.51□□□□□ -1.53
COL4A5-205ENST00000483338 LINC00242Q5T6M2 205 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms