RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 PRR4Q16378 134 aa7.76□□□□□ -1.17
TMEM54-206ENST00000482771 FAM104BQ5XKR9 115 aa7.76□□□□□ -1.17
TMEM54-206ENST00000482771 ST20Q9HBF5 79 aa7.76□□□□□ -1.17
TMEM54-206ENST00000482771 C1orf196B1AJZ1 125 aa7.75□□□□□ -1.17
TMEM54-206ENST00000482771 PPP1R17O96001 155 aa7.75□□□□□ -1.17
TMEM54-206ENST00000482771 MRPL54Q6P161 138 aaKnown RBP7.75□□□□□ -1.17
TMEM54-206ENST00000482771 MRPL52Q86TS9 123 aaKnown RBP7.75□□□□□ -1.17
TMEM54-206ENST00000482771 C2orf48Q96LS8 159 aa7.75□□□□□ -1.17
TMEM54-206ENST00000482771 TRAV9-1A0A075B6T8 112 aa7.74□□□□□ -1.17
TMEM54-206ENST00000482771 RHEBQ15382 184 aa7.74□□□□□ -1.17
TMEM54-206ENST00000482771 C5orf38Q86SI9 138 aa7.74□□□□□ -1.17
TMEM54-206ENST00000482771 TRAV13-1A0A0B4J241 112 aa7.73□□□□□ -1.17
TMEM54-206ENST00000482771 C7orf77A4D0Y5 90 aa7.73□□□□□ -1.17
TMEM54-206ENST00000482771 H0Y9J4 135 aa7.73□□□□□ -1.17
TMEM54-206ENST00000482771 POLR2KP53803 58 aaKnown RBP7.73□□□□□ -1.17
TMEM54-206ENST00000482771 MRPL51Q4U2R6 128 aaKnown RBP7.73□□□□□ -1.17
TMEM54-206ENST00000482771 KRTAP11-1Q8IUC1 163 aa7.73□□□□□ -1.17
TMEM54-206ENST00000482771 IGLV1-50A0A075B6I6 118 aa7.72□□□□□ -1.17
TMEM54-206ENST00000482771 A0A0U1RQV1 116 aa7.72□□□□□ -1.17
TMEM54-206ENST00000482771 PPBPP02775 128 aa7.72□□□□□ -1.17
TMEM54-206ENST00000482771 NDUFA5Q16718 116 aa7.72□□□□□ -1.17
TMEM54-206ENST00000482771 RNASE13Q5GAN3 156 aaKnown RBP7.72□□□□□ -1.17
TMEM54-206ENST00000482771 NRACQ8N912 160 aa7.72□□□□□ -1.17
TMEM54-206ENST00000482771 TRBV24-1A0A075B6N3 115 aa7.71□□□□□ -1.18
TMEM54-206ENST00000482771 TRBV27A0A0K0K1C4 114 aa7.71□□□□□ -1.18
TMEM54-206ENST00000482771 FAM168BA1KXE4 195 aa7.71□□□□□ -1.18
TMEM54-206ENST00000482771 RPL32P62910 135 aaKnown RBP7.71□□□□□ -1.18
TMEM54-206ENST00000482771 RNF151Q2KHN1 245 aa7.71□□□□□ -1.18
TMEM54-206ENST00000482771 SVBPQ8N300 66 aa7.71□□□□□ -1.18
TMEM54-206ENST00000482771 C20orf78Q9BR46 151 aa7.71□□□□□ -1.18
TMEM54-206ENST00000482771 SMKR1H3BMG3 65 aa7.7□□□□□ -1.18
TMEM54-206ENST00000482771 SNAPINO95295 136 aa7.7□□□□□ -1.18
TMEM54-206ENST00000482771 APOC3P02656 99 aa7.7□□□□□ -1.18
TMEM54-206ENST00000482771 KRTAP1-4P0C5Y4 121 aa7.7□□□□□ -1.18
TMEM54-206ENST00000482771 S100PP25815 95 aa7.7□□□□□ -1.18
TMEM54-206ENST00000482771 CKS2P33552 79 aa7.7□□□□□ -1.18
TMEM54-206ENST00000482771 SUMO2P61956 95 aaKnown RBP7.7□□□□□ -1.18
TMEM54-206ENST00000482771 SPAG11BQ08648 103 aa7.7□□□□□ -1.18
TMEM54-206ENST00000482771 D6R8Y8 96 aa7.69□□□□□ -1.18
TMEM54-206ENST00000482771 VCYO14598 125 aa7.69□□□□□ -1.18
TMEM54-206ENST00000482771 FCER1GP30273 86 aa7.69□□□□□ -1.18
TMEM54-206ENST00000482771 RPS10P5Q9NQ39 176 aa7.69□□□□□ -1.18
TMEM54-206ENST00000482771 UBE2D4Q9Y2X8 147 aa7.69□□□□□ -1.18
TMEM54-206ENST00000482771 CSDC2Q9Y534 153 aaKnown RBP7.69□□□□□ -1.18
TMEM54-206ENST00000482771 TNFRSF6BO95407 300 aa7.68□□□□□ -1.18
TMEM54-206ENST00000482771 UBE2D1P51668 147 aa7.68□□□□□ -1.18
TMEM54-206ENST00000482771 SMAGPQ0VAQ4 97 aa7.68□□□□□ -1.18
TMEM54-206ENST00000482771 COX19Q49B96 90 aa7.68□□□□□ -1.18
TMEM54-206ENST00000482771 ORMDL3Q8N138 153 aa7.68□□□□□ -1.18
TMEM54-206ENST00000482771 MRPL35Q9NZE8 188 aaKnown RBP7.68□□□□□ -1.18
TMEM54-206ENST00000482771 LAMTOR2Q9Y2Q5 125 aa7.68□□□□□ -1.18
TMEM54-206ENST00000482771 GAGE2EQ4V326 116 aa7.67□□□□□ -1.18
TMEM54-206ENST00000482771 C10orf25Q5T742 122 aa7.67□□□□□ -1.18
TMEM54-206ENST00000482771 TMEM136Q6ZRR5 245 aa7.67□□□□□ -1.18
TMEM54-206ENST00000482771 FAM19A5Q7Z5A7 132 aaPredicted RBP7.67□□□□□ -1.18
TMEM54-206ENST00000482771 GAGE2DQ9UEU5 116 aa7.67□□□□□ -1.18
TMEM54-206ENST00000482771 PRSS47A8MTI9 375 aa7.66□□□□□ -1.18
TMEM54-206ENST00000482771 TCAPO15273 167 aa7.66□□□□□ -1.18
TMEM54-206ENST00000482771 NPYP01303 97 aa7.66□□□□□ -1.18
TMEM54-206ENST00000482771 UNQ6190/PRO20217Q6UXQ8 127 aa7.66□□□□□ -1.18
TMEM54-206ENST00000482771 OR10D4PQ8NGN7 298 aa7.66□□□□□ -1.18
TMEM54-206ENST00000482771 ORAOV1Q8WV07 137 aa7.66□□□□□ -1.18
TMEM54-206ENST00000482771 PRELID3AQ96N28 172 aa7.66□□□□□ -1.18
TMEM54-206ENST00000482771 KIR2DL4Q99706 377 aa7.66□□□□□ -1.18
TMEM54-206ENST00000482771 SMIM2Q9BVW6 85 aa7.66□□□□□ -1.18
TMEM54-206ENST00000482771 F8WDY8 70 aa7.65□□□□□ -1.18
TMEM54-206ENST00000482771 NDUFA1O15239 70 aa7.65□□□□□ -1.18
TMEM54-206ENST00000482771 TSPAN13O95857 204 aa7.65□□□□□ -1.18
TMEM54-206ENST00000482771 RPL13AP40429 203 aaKnown RBP7.65□□□□□ -1.18
TMEM54-206ENST00000482771 Q6ZUT4 128 aa7.65□□□□□ -1.18
TMEM54-206ENST00000482771 KRTAP7-1Q8IUC3 87 aa7.65□□□□□ -1.18
TMEM54-206ENST00000482771 SLC7A5P1Q8MH63 180 aa7.65□□□□□ -1.18
TMEM54-206ENST00000482771 GNB1LQ9BYB4 327 aa7.65□□□□□ -1.18
TMEM54-206ENST00000482771 FAT4Q6V0I7 4981 aa7.64□□□□□ -1.19
TMEM54-206ENST00000482771 TLX1NBP0CAT3 122 aa7.64□□□□□ -1.19
TMEM54-206ENST00000482771 UBE2BP63146 152 aa7.64□□□□□ -1.19
TMEM54-206ENST00000482771 C6orf48Q9UBA6 75 aa7.64□□□□□ -1.19
TMEM54-206ENST00000482771 KRTAP9-6A0A140TA67 174 aa7.63□□□□□ -1.19
TMEM54-206ENST00000482771 LCE2AQ5TA79 106 aaPredicted RBP7.63□□□□□ -1.19
TMEM54-206ENST00000482771 TMEM18Q96B42 140 aa7.63□□□□□ -1.19
TMEM54-206ENST00000482771 TIMM21Q9BVV7 248 aa7.63□□□□□ -1.19
TMEM54-206ENST00000482771 IGHV3OR16-9A0A0B4J2B5 98 aa7.62□□□□□ -1.19
TMEM54-206ENST00000482771 M0QXV9 152 aa7.62□□□□□ -1.19
TMEM54-206ENST00000482771 MAP1LC3AQ9H492 121 aa7.62□□□□□ -1.19
TMEM54-206ENST00000482771 FAM104AQ969W3 186 aa7.61□□□□□ -1.19
TMEM54-206ENST00000482771 TGIF2-C20orf24A0A0A6YYL0 155 aa7.6□□□□□ -1.19
TMEM54-206ENST00000482771 K7EMI3 77 aa7.6□□□□□ -1.19
TMEM54-206ENST00000482771 RPL39P62891 51 aaKnown RBP7.6□□□□□ -1.19
TMEM54-206ENST00000482771 Q8N8P6 123 aa7.6□□□□□ -1.19
TMEM54-206ENST00000482771 YPEL4Q96NS1 127 aa7.6□□□□□ -1.19
TMEM54-206ENST00000482771 ZNF861PO60384 105 aa7.59□□□□□ -1.19
TMEM54-206ENST00000482771 RAB5AP20339 215 aa7.59□□□□□ -1.19
TMEM54-206ENST00000482771 KIAA1644Q3SXP7 199 aa7.59□□□□□ -1.19
TMEM54-206ENST00000482771 MRPL18Q9H0U6 180 aaKnown RBP7.59□□□□□ -1.19
TMEM54-206ENST00000482771 NXT2Q9NPJ8 142 aaKnown RBP7.59□□□□□ -1.19
TMEM54-206ENST00000482771 SMCO4Q9NRQ5 59 aa7.59□□□□□ -1.19
TMEM54-206ENST00000482771 KIAA0087Q14695 138 aa7.58□□□□□ -1.2
TMEM54-206ENST00000482771 C9orf129Q5T035 196 aaKnown RBP7.58□□□□□ -1.2
TMEM54-206ENST00000482771 ALKBH7Q9BT30 221 aaPredicted RBP7.58□□□□□ -1.2
TMEM54-206ENST00000482771 LOC389332A0A1B0GUA5 103 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms