RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 ZNF561-AS1K7EIQ3 104 aa10.72□□□□□ -0.69
HMGN1-214ENST00000482733 RAB5BP61020 215 aa10.72□□□□□ -0.69
HMGN1-214ENST00000482733 ERASQ7Z444 233 aa10.72□□□□□ -0.69
HMGN1-214ENST00000482733 C5orf38Q86SI9 138 aa10.72□□□□□ -0.69
HMGN1-214ENST00000482733 Q8N1X5 172 aa10.72□□□□□ -0.69
HMGN1-214ENST00000482733 SCGB3A1Q96QR1 104 aa10.72□□□□□ -0.69
HMGN1-214ENST00000482733 IGHV3-64A0A075B6Q5 118 aa10.71□□□□□ -0.69
HMGN1-214ENST00000482733 IGHV3OR16-9A0A0B4J2B5 98 aa10.71□□□□□ -0.69
HMGN1-214ENST00000482733 LINC00614P0C842 121 aa10.71□□□□□ -0.69
HMGN1-214ENST00000482733 UBE2D1P51668 147 aa10.7□□□□□ -0.7
HMGN1-214ENST00000482733 LINC00242Q5T6M2 205 aa10.7□□□□□ -0.7
HMGN1-214ENST00000482733 SDIM1Q6ZPB5 146 aa10.7□□□□□ -0.7
HMGN1-214ENST00000482733 FAT1Q14517 4588 aa10.69□□□□□ -0.7
HMGN1-214ENST00000482733 LINC00173Q6ZV60 143 aa10.69□□□□□ -0.7
HMGN1-214ENST00000482733 CHAC1Q9BUX1 264 aa10.69□□□□□ -0.7
HMGN1-214ENST00000482733 PKIGQ9Y2B9 76 aa10.69□□□□□ -0.7
HMGN1-214ENST00000482733 SEC11AP67812 179 aa10.68□□□□□ -0.7
HMGN1-214ENST00000482733 OR10D4PQ8NGN7 298 aa10.68□□□□□ -0.7
HMGN1-214ENST00000482733 A0A087WZ39 114 aa10.67□□□□□ -0.7
HMGN1-214ENST00000482733 ZC2HC1BQ5TFG8 222 aa10.67□□□□□ -0.7
HMGN1-214ENST00000482733 FAM19A3Q7Z5A8 133 aa10.67□□□□□ -0.7
HMGN1-214ENST00000482733 C2orf48Q96LS8 159 aa10.67□□□□□ -0.7
HMGN1-214ENST00000482733 CARD19Q96LW7 228 aa10.67□□□□□ -0.7
HMGN1-214ENST00000482733 IGLV4-69A0A075B6H9 119 aa10.66□□□□□ -0.7
HMGN1-214ENST00000482733 HAMPP81172 84 aa10.66□□□□□ -0.7
HMGN1-214ENST00000482733 SYCNQ0VAF6 134 aa10.66□□□□□ -0.7
HMGN1-214ENST00000482733 SCXQ7RTU7 201 aa10.66□□□□□ -0.7
HMGN1-214ENST00000482733 LINC01561Q8N1V8 128 aa10.66□□□□□ -0.7
HMGN1-214ENST00000482733 LINC00526Q96FQ7 95 aa10.66□□□□□ -0.7
HMGN1-214ENST00000482733 URB1-AS1Q96HZ7 61 aa10.66□□□□□ -0.7
HMGN1-214ENST00000482733 F8WDY8 70 aa10.65□□□□□ -0.7
HMGN1-214ENST00000482733 HBDP02042 147 aa10.65□□□□□ -0.7
HMGN1-214ENST00000482733 HERVK_113P63121 156 aa10.65□□□□□ -0.7
HMGN1-214ENST00000482733 COX6A2Q02221 97 aa10.65□□□□□ -0.7
HMGN1-214ENST00000482733 SPAG11BQ08648 103 aa10.65□□□□□ -0.7
HMGN1-214ENST00000482733 ORAOV1Q8WV07 137 aa10.65□□□□□ -0.7
HMGN1-214ENST00000482733 EPM2AB3EWF7 344 aa10.64□□□□□ -0.71
HMGN1-214ENST00000482733 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-214ENST00000482733 TRGC2P03986 189 aa10.64□□□□□ -0.71
HMGN1-214ENST00000482733 CIRBP-AS1Q8TBR5 109 aa10.64□□□□□ -0.71
HMGN1-214ENST00000482733 CHCHD1Q96BP2 118 aaKnown RBP10.64□□□□□ -0.71
HMGN1-214ENST00000482733 CAMK2N2Q96S95 79 aa10.64□□□□□ -0.71
HMGN1-214ENST00000482733 COLCA2A8K830 154 aa10.63□□□□□ -0.71
HMGN1-214ENST00000482733 FAM229AH3BQW9 127 aa10.63□□□□□ -0.71
HMGN1-214ENST00000482733 SMR3BP02814 79 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-214ENST00000482733 PMVKQ15126 192 aa10.63□□□□□ -0.71
HMGN1-214ENST00000482733 KRTAP17-1Q9BYP8 105 aa10.63□□□□□ -0.71
HMGN1-214ENST00000482733 GEMIN7Q9H840 131 aaKnown RBP10.63□□□□□ -0.71
HMGN1-214ENST00000482733 ABCA13Q86UQ4 5058 aa10.62□□□□□ -0.71
HMGN1-214ENST00000482733 A0A096LNJ9 63 aa10.62□□□□□ -0.71
HMGN1-214ENST00000482733 CIRBPQ14011 172 aaKnown RBP10.62□□□□□ -0.71
HMGN1-214ENST00000482733 CST9LQ9H4G1 147 aa10.62□□□□□ -0.71
HMGN1-214ENST00000482733 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.62□□□□□ -0.71
HMGN1-214ENST00000482733 ATP5LO75964 103 aa10.61□□□□□ -0.71
HMGN1-214ENST00000482733 Q5VSD8 79 aa10.61□□□□□ -0.71
HMGN1-214ENST00000482733 Q6ZRU5 148 aa10.61□□□□□ -0.71
HMGN1-214ENST00000482733 A0A0J9YXV3 536 aa10.6□□□□□ -0.71
HMGN1-214ENST00000482733 TINCRA0A1B0GVN0 87 aa10.6□□□□□ -0.71
HMGN1-214ENST00000482733 PMCHL1Q16048 86 aa10.6□□□□□ -0.71
HMGN1-214ENST00000482733 RNF151Q2KHN1 245 aa10.6□□□□□ -0.71
HMGN1-214ENST00000482733 PDZD11Q5EBL8 140 aa10.6□□□□□ -0.71
HMGN1-214ENST00000482733 BAGE3Q86Y29 109 aa10.6□□□□□ -0.71
HMGN1-214ENST00000482733 DPH3Q96FX2 82 aa10.6□□□□□ -0.71
HMGN1-214ENST00000482733 LINC00474Q9P2X8 69 aa10.6□□□□□ -0.71
HMGN1-214ENST00000482733 NDUFA1O15239 70 aa10.59□□□□□ -0.71
HMGN1-214ENST00000482733 SPACA4Q8TDM5 124 aa10.59□□□□□ -0.71
HMGN1-214ENST00000482733 PACRGQ96M98 296 aaPredicted RBP10.59□□□□□ -0.71
HMGN1-214ENST00000482733 KRTAP4-5Q9BYR2 181 aa10.59□□□□□ -0.71
HMGN1-214ENST00000482733 MRPL35Q9NZE8 188 aaKnown RBP10.59□□□□□ -0.71
HMGN1-214ENST00000482733 PCLOQ9Y6V0 5065 aa10.58□□□□□ -0.72
HMGN1-214ENST00000482733 PANO1I0J062 215 aa10.58□□□□□ -0.72
HMGN1-214ENST00000482733 LINC00528Q8N1L1 170 aa10.58□□□□□ -0.72
HMGN1-214ENST00000482733 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
HMGN1-214ENST00000482733 VPS13BQ7Z7G8 4022 aa10.57□□□□□ -0.72
HMGN1-214ENST00000482733 LOC107984640A0A0U1RRK4 108 aa10.57□□□□□ -0.72
HMGN1-214ENST00000482733 HSBP1O75506 76 aa10.57□□□□□ -0.72
HMGN1-214ENST00000482733 PRSS2P07478 247 aa10.57□□□□□ -0.72
HMGN1-214ENST00000482733 CHTF8P0CG12 524 aa10.57□□□□□ -0.72
HMGN1-214ENST00000482733 NDUFA6P56556 154 aa10.57□□□□□ -0.72
HMGN1-214ENST00000482733 KIAA0087Q14695 138 aa10.57□□□□□ -0.72
HMGN1-214ENST00000482733 LINC00469Q8N7U9 141 aa10.57□□□□□ -0.72
HMGN1-214ENST00000482733 IGLV5-45A0A087WSX0 123 aa10.56□□□□□ -0.72
HMGN1-214ENST00000482733 IGKV2-24A0A0C4DH68 120 aa10.56□□□□□ -0.72
HMGN1-214ENST00000482733 MAJINQ3KP22 176 aa10.56□□□□□ -0.72
HMGN1-214ENST00000482733 A0A087WYN8 130 aa10.55□□□□□ -0.72
HMGN1-214ENST00000482733 A0A096LNI7 61 aa10.55□□□□□ -0.72
HMGN1-214ENST00000482733 SCO1O75880 301 aa10.55□□□□□ -0.72
HMGN1-214ENST00000482733 PLA2G1BP04054 148 aaKnown RBP10.55□□□□□ -0.72
HMGN1-214ENST00000482733 Q8IZM0 81 aa10.55□□□□□ -0.72
HMGN1-214ENST00000482733 H3BRM9 83 aa10.54□□□□□ -0.72
HMGN1-214ENST00000482733 IGLC3P0DOY3 106 aa10.54□□□□□ -0.72
HMGN1-214ENST00000482733 C6orf226Q5I0X4 101 aa10.54□□□□□ -0.72
HMGN1-214ENST00000482733 PLAC8Q9NZF1 115 aa10.54□□□□□ -0.72
HMGN1-214ENST00000482733 TRBV30A0A0K0K1B3 111 aa10.53□□□□□ -0.72
HMGN1-214ENST00000482733 PTTG1IPP53801 180 aa10.53□□□□□ -0.72
HMGN1-214ENST00000482733 CKS1BP61024 79 aa10.53□□□□□ -0.72
HMGN1-214ENST00000482733 UNQ6190/PRO20217Q6UXQ8 127 aa10.53□□□□□ -0.72
HMGN1-214ENST00000482733 TOMM7Q9P0U1 55 aa10.53□□□□□ -0.72
HMGN1-214ENST00000482733 GAGE2BQ13066 116 aa10.52□□□□□ -0.73
HMGN1-214ENST00000482733 C10orf25Q5T742 122 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms