RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 LINC01546A6NGU7 62 aa4.49□□□□□ -1.69
CTNNB1-213ENST00000482042 COLCA2A8K830 154 aa4.49□□□□□ -1.69
CTNNB1-213ENST00000482042 LINC00614P0C842 121 aa4.49□□□□□ -1.69
CTNNB1-213ENST00000482042 REG3AQ06141 175 aa4.49□□□□□ -1.69
CTNNB1-213ENST00000482042 Q6ZN92 141 aa4.49□□□□□ -1.69
CTNNB1-213ENST00000482042 ZNF664Q8N3J9 261 aa4.49□□□□□ -1.69
CTNNB1-213ENST00000482042 Q8N976 141 aa4.49□□□□□ -1.69
CTNNB1-213ENST00000482042 C18orf32Q8TCD1 76 aa4.49□□□□□ -1.69
CTNNB1-213ENST00000482042 UBE2WQ96B02 151 aa4.49□□□□□ -1.69
CTNNB1-213ENST00000482042 PRR34Q9NV39 138 aa4.49□□□□□ -1.69
CTNNB1-213ENST00000482042 UBE2D4Q9Y2X8 147 aa4.49□□□□□ -1.69
CTNNB1-213ENST00000482042 HYDINQ4G0P3 5121 aa4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 KMT2CQ8NEZ4 4911 aaKnown RBP4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 KMT2AQ03164 3969 aa4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 IFITM10A6NMD0 228 aa4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 USP17L23D6RBM5 183 aa4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 TRGC2P03986 189 aa4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 MRPS36P82909 103 aaKnown RBP4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 SS18Q15532 418 aa4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 C2orf66Q6UXQ4 117 aa4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 LINC00269Q8N2A0 174 aa4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 CHCHD1Q96BP2 118 aaKnown RBP4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 Q9HAA7 133 aa4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 CDC42SE2Q9NRR3 84 aa4.48□□□□□ -1.69
CTNNB1-213ENST00000482042 IGLV4-60A0A075B6I1 120 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 IGKV2D-24A0A075B6R9 120 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 PRSS2P07478 247 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 C14orf177Q52M58 125 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 SERTAD4-AS1Q5TG53 156 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 ENHOQ6UWT2 76 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 BAGE3Q86Y29 109 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 DEFB104AQ8WTQ1 72 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 TOMM6Q96B49 74 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 TMEM141Q96I45 108 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 TIMM17AQ99595 171 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 C2orf88Q9BSF0 95 aa4.47□□□□□ -1.69
CTNNB1-213ENST00000482042 A0A0U1RRA0 63 aa4.46□□□□□ -1.7
CTNNB1-213ENST00000482042 C1orf196B1AJZ1 125 aa4.46□□□□□ -1.7
CTNNB1-213ENST00000482042 HSBP1O75506 76 aa4.46□□□□□ -1.7
CTNNB1-213ENST00000482042 SCO1O75880 301 aa4.46□□□□□ -1.7
CTNNB1-213ENST00000482042 HBDP02042 147 aa4.46□□□□□ -1.7
CTNNB1-213ENST00000482042 SEC11AP67812 179 aa4.46□□□□□ -1.7
CTNNB1-213ENST00000482042 TEX43Q6ZNM6 134 aa4.46□□□□□ -1.7
CTNNB1-213ENST00000482042 DNAH2Q9P225 4427 aa4.45□□□□□ -1.7
CTNNB1-213ENST00000482042 RYR2Q92736 4967 aa4.45□□□□□ -1.7
CTNNB1-213ENST00000482042 LINC00959A0A1B0GUT2 108 aa4.45□□□□□ -1.7
CTNNB1-213ENST00000482042 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.45□□□□□ -1.7
CTNNB1-213ENST00000482042 RTL8CO15255 209 aa4.45□□□□□ -1.7
CTNNB1-213ENST00000482042 ATP5LO75964 103 aa4.45□□□□□ -1.7
CTNNB1-213ENST00000482042 RPL39P62891 51 aaKnown RBP4.45□□□□□ -1.7
CTNNB1-213ENST00000482042 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
CTNNB1-213ENST00000482042 Q6ZRN7 208 aaPredicted RBP4.45□□□□□ -1.7
CTNNB1-213ENST00000482042 SCGB3A1Q96QR1 104 aa4.45□□□□□ -1.7
CTNNB1-213ENST00000482042 FRAS1Q86XX4 4008 aa4.44□□□□□ -1.7
CTNNB1-213ENST00000482042 IGLV4-3A0A075B6K6 122 aa4.44□□□□□ -1.7
CTNNB1-213ENST00000482042 A0A0A0MQY5 61 aa4.44□□□□□ -1.7
CTNNB1-213ENST00000482042 IGKV3OR2-268A0A0C4DH90 116 aa4.44□□□□□ -1.7
CTNNB1-213ENST00000482042 APOMO95445 188 aa4.44□□□□□ -1.7
CTNNB1-213ENST00000482042 VPREB1P12018 145 aa4.44□□□□□ -1.7
CTNNB1-213ENST00000482042 CLPSL2Q6UWE3 100 aa4.44□□□□□ -1.7
CTNNB1-213ENST00000482042 Q6ZUT4 128 aa4.44□□□□□ -1.7
CTNNB1-213ENST00000482042 GEMIN7Q9H840 131 aaKnown RBP4.44□□□□□ -1.7
CTNNB1-213ENST00000482042 DNAH17Q9UFH2 4485 aa4.44□□□□□ -1.7
CTNNB1-213ENST00000482042 IGIPA6NJ69 53 aa4.43□□□□□ -1.7
CTNNB1-213ENST00000482042 CD164L2Q6UWJ8 174 aa4.43□□□□□ -1.7
CTNNB1-213ENST00000482042 CHCHD10Q8WYQ3 142 aaPredicted RBP4.43□□□□□ -1.7
CTNNB1-213ENST00000482042 AMELXQ99217 191 aa4.43□□□□□ -1.7
CTNNB1-213ENST00000482042 DNAH10Q8IVF4 4471 aa4.43□□□□□ -1.7
CTNNB1-213ENST00000482042 IGLV10-54A0A075B6I4 117 aa4.42□□□□□ -1.7
CTNNB1-213ENST00000482042 A0A087WTM6 91 aa4.42□□□□□ -1.7
CTNNB1-213ENST00000482042 HERVK_113P63121 156 aa4.42□□□□□ -1.7
CTNNB1-213ENST00000482042 PMVKQ15126 192 aa4.42□□□□□ -1.7
CTNNB1-213ENST00000482042 FAM19A3Q7Z5A8 133 aa4.42□□□□□ -1.7
CTNNB1-213ENST00000482042 LINC01561Q8N1V8 128 aa4.42□□□□□ -1.7
CTNNB1-213ENST00000482042 PACRGQ96M98 296 aaPredicted RBP4.42□□□□□ -1.7
CTNNB1-213ENST00000482042 PKIGQ9Y2B9 76 aa4.42□□□□□ -1.7
CTNNB1-213ENST00000482042 RYR3Q15413 4870 aa4.42□□□□□ -1.7
CTNNB1-213ENST00000482042 TRAV13-1A0A0B4J241 112 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 IGHV1-58A0A0C4DH39 117 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 LRCOL1A6NCL2 159 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HIST1H2BKO60814 126 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 LEPROTL1O95214 131 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HIST1H2BJP06899 126 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HIST1H2BOP23527 126 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HIST1H2BBP33778 126 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HIST1H2BDP58876 126 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HIST1H2BCP62807 126 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HIST2H2BEQ16778 126 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 PDZD11Q5EBL8 140 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 Q8N814 137 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HIST1H2BHQ93079 126 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HIST1H2BNQ99877 126 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HIST1H2BMQ99879 126 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 HSPB8Q9UJY1 196 aa4.41□□□□□ -1.7
CTNNB1-213ENST00000482042 A0A087WYN8 130 aa4.4□□□□□ -1.7
CTNNB1-213ENST00000482042 A0A096LNJ9 63 aa4.4□□□□□ -1.7
CTNNB1-213ENST00000482042 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.4□□□□□ -1.7
CTNNB1-213ENST00000482042 COX7A2LO14548 114 aa4.4□□□□□ -1.7
CTNNB1-213ENST00000482042 SERF1AO75920 110 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms