RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 SIPA1L3O60292 1781 aaPredicted RBP-0.82□□□□□ -2.54
KDM1A-204ENST00000481879 GOLGA4Q13439 2230 aaKnown RBP-0.82□□□□□ -2.54
KDM1A-204ENST00000481879 C10orf128Q5T292 105 aa-0.82□□□□□ -2.54
KDM1A-204ENST00000481879 GSKIPQ9P0R6 139 aa-0.82□□□□□ -2.54
KDM1A-204ENST00000481879 ZFHX4Q86UP3 3567 aa-0.82□□□□□ -2.54
KDM1A-204ENST00000481879 FAM186AA6NE01 2351 aa-0.82□□□□□ -2.54
KDM1A-204ENST00000481879 NRXN2Q9P2S2 1712 aa-0.83□□□□□ -2.54
KDM1A-204ENST00000481879 ARPC5O15511 151 aa-0.83□□□□□ -2.54
KDM1A-204ENST00000481879 SPINK4O60575 86 aa-0.83□□□□□ -2.54
KDM1A-204ENST00000481879 NCR2O95944 276 aa-0.83□□□□□ -2.54
KDM1A-204ENST00000481879 B2MP61769 119 aa-0.83□□□□□ -2.54
KDM1A-204ENST00000481879 KRTAP19-6Q3LI70 58 aa-0.83□□□□□ -2.54
KDM1A-204ENST00000481879 SCIMPQ6UWF3 145 aa-0.83□□□□□ -2.54
KDM1A-204ENST00000481879 KCNRGQ8N5I3 272 aa-0.83□□□□□ -2.54
KDM1A-204ENST00000481879 CASKIN1Q8WXD9 1431 aa-0.83□□□□□ -2.54
KDM1A-204ENST00000481879 PDE4DIPQ5VU43 2346 aa-0.83□□□□□ -2.54
KDM1A-204ENST00000481879 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.83□□□□□ -2.54
KDM1A-204ENST00000481879 SPTBN5Q9NRC6 3674 aaKnown RBP-0.84□□□□□ -2.54
KDM1A-204ENST00000481879 MT1BP07438 61 aa-0.84□□□□□ -2.54
KDM1A-204ENST00000481879 DEFB1P60022 68 aa-0.84□□□□□ -2.54
KDM1A-204ENST00000481879 PIGYQ3MUY2 71 aa-0.84□□□□□ -2.54
KDM1A-204ENST00000481879 TMEM170BQ5T4T1 132 aa-0.84□□□□□ -2.54
KDM1A-204ENST00000481879 TSTD1Q8NFU3 115 aa-0.84□□□□□ -2.54
KDM1A-204ENST00000481879 DAPK1P53355 1430 aa-0.84□□□□□ -2.54
KDM1A-204ENST00000481879 DNAH10Q8IVF4 4471 aa-0.84□□□□□ -2.54
KDM1A-204ENST00000481879 GUCA1AP43080 201 aaPredicted RBP-0.85□□□□□ -2.55
KDM1A-204ENST00000481879 ERCC6L2Q5T890 1561 aa-0.85□□□□□ -2.55
KDM1A-204ENST00000481879 Q6JHZ5 121 aa-0.85□□□□□ -2.55
KDM1A-204ENST00000481879 SDF2Q99470 211 aa-0.85□□□□□ -2.55
KDM1A-204ENST00000481879 LINC00472Q9H8W2 130 aa-0.85□□□□□ -2.55
KDM1A-204ENST00000481879 XIRP1Q702N8 1843 aaKnown RBP-0.85□□□□□ -2.55
KDM1A-204ENST00000481879 WNK3Q9BYP7 1800 aa-0.85□□□□□ -2.55
KDM1A-204ENST00000481879 PRG4Q92954 1404 aaPredicted RBP-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 TRAV13-2A0A0B4J235 113 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 H3BNG1 76 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 K7EP34 96 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 MT1GP13640 62 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 COX6B1P14854 86 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 HIST1H1DP16402 221 aaKnown RBP-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 ALX1Q15699 326 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 TTC9CQ8N5M4 171 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 PYDC1Q8WXC3 89 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 AQP10Q96PS8 301 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 V9GYH0 126 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 RANBP2P49792 3224 aaKnown RBP-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 MUC22E2RYF6 1773 aaPredicted RBP-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 PRUNE2Q8WUY3 3088 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 DOCK1Q14185 1865 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 IFT140Q96RY7 1462 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 WDR7Q9Y4E6 1490 aa-0.86□□□□□ -2.55
KDM1A-204ENST00000481879 MT2AP02795 61 aa-0.87□□□□□ -2.55
KDM1A-204ENST00000481879 COPZ1P61923 177 aa-0.87□□□□□ -2.55
KDM1A-204ENST00000481879 RPS25P62851 125 aaKnown RBP-0.87□□□□□ -2.55
KDM1A-204ENST00000481879 MT1MQ8N339 61 aa-0.87□□□□□ -2.55
KDM1A-204ENST00000481879 DEFB105AQ8NG35 78 aa-0.87□□□□□ -2.55
KDM1A-204ENST00000481879 LZICQ8WZA0 190 aa-0.87□□□□□ -2.55
KDM1A-204ENST00000481879 DPH3Q96FX2 82 aa-0.87□□□□□ -2.55
KDM1A-204ENST00000481879 AMELXQ99217 191 aa-0.87□□□□□ -2.55
KDM1A-204ENST00000481879 TPT1P8Q9HAU6 139 aa-0.87□□□□□ -2.55
KDM1A-204ENST00000481879 LRP6O75581 1613 aa-0.87□□□□□ -2.55
KDM1A-204ENST00000481879 MRC1P22897 1456 aa-0.87□□□□□ -2.55
KDM1A-204ENST00000481879 SPTAN1Q13813 2472 aaKnown RBP-0.88□□□□□ -2.55
KDM1A-204ENST00000481879 SPAARA0A1B0GVQ0 90 aa-0.88□□□□□ -2.55
KDM1A-204ENST00000481879 LENEPQ9Y5L5 61 aa-0.88□□□□□ -2.55
KDM1A-204ENST00000481879 CSMD2Q7Z408 3487 aa-0.88□□□□□ -2.55
KDM1A-204ENST00000481879 ADGRB1O14514 1584 aa-0.88□□□□□ -2.55
KDM1A-204ENST00000481879 KDM3BQ7LBC6 1761 aa-0.88□□□□□ -2.55
KDM1A-204ENST00000481879 TROQ12816 1431 aaPredicted RBP-0.89□□□□□ -2.55
KDM1A-204ENST00000481879 CENPEQ02224 2701 aa-0.89□□□□□ -2.55
KDM1A-204ENST00000481879 AKAP14Q86UN6 197 aa-0.89□□□□□ -2.55
KDM1A-204ENST00000481879 BAGE2Q86Y30 109 aa-0.89□□□□□ -2.55
KDM1A-204ENST00000481879 ZNF518AQ6AHZ1 1483 aa-0.89□□□□□ -2.55
KDM1A-204ENST00000481879 ANKRD30AQ9BXX3 1397 aa-0.9□□□□□ -2.55
KDM1A-204ENST00000481879 F8VRH5 84 aa-0.9□□□□□ -2.55
KDM1A-204ENST00000481879 H0YGG7 62 aa-0.9□□□□□ -2.55
KDM1A-204ENST00000481879 COX17Q14061 63 aa-0.9□□□□□ -2.55
KDM1A-204ENST00000481879 KRTAP19-5Q3LI72 72 aa-0.9□□□□□ -2.55
KDM1A-204ENST00000481879 COPZ2Q9P299 210 aa-0.9□□□□□ -2.55
KDM1A-204ENST00000481879 IFT172Q9UG01 1749 aa-0.9□□□□□ -2.55
KDM1A-204ENST00000481879 PAPPAQ13219 1627 aa-0.9□□□□□ -2.55
KDM1A-204ENST00000481879 DMDP11532 3685 aa-0.91□□□□□ -2.55
KDM1A-204ENST00000481879 KDM5AP29375 1690 aaKnown RBP-0.91□□□□□ -2.55
KDM1A-204ENST00000481879 COL4A6Q14031 1691 aa-0.91□□□□□ -2.55
KDM1A-204ENST00000481879 FREM2Q5SZK8 3169 aa-0.91□□□□□ -2.55
KDM1A-204ENST00000481879 MT1EP04732 61 aa-0.91□□□□□ -2.56
KDM1A-204ENST00000481879 SMCO1Q147U7 214 aa-0.91□□□□□ -2.56
KDM1A-204ENST00000481879 Q6AWC8 147 aa-0.91□□□□□ -2.56
KDM1A-204ENST00000481879 C9orf62Q8N4C0 152 aa-0.91□□□□□ -2.56
KDM1A-204ENST00000481879 ANP32BQ92688 251 aaKnown RBP-0.91□□□□□ -2.56
KDM1A-204ENST00000481879 MT1LQ93083 61 aa-0.91□□□□□ -2.56
KDM1A-204ENST00000481879 TCEAL4Q96EI5 215 aa-0.91□□□□□ -2.56
KDM1A-204ENST00000481879 TMEM191AQ9H0A3 160 aa-0.91□□□□□ -2.56
KDM1A-204ENST00000481879 WDFY3Q8IZQ1 3526 aa-0.91□□□□□ -2.56
KDM1A-204ENST00000481879 PARP14Q460N5 1801 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 ARFGEF1Q9Y6D6 1849 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 LRRC37A3O60309 1634 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 IGLC7A0M8Q6 106 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 C9orf92A6NGG3 77 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 UQCR11O14957 56 aa-0.92□□□□□ -2.56
KDM1A-204ENST00000481879 SMR3BP02814 79 aaPredicted RBP-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms