RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 SH2D6Q7Z4S9 175 aa4.49□□□□□ -1.69
LSM5-210ENST00000480956 EP300Q09472 2414 aaPredicted RBP4.48□□□□□ -1.69
LSM5-210ENST00000480956 ASCC3Q8N3C0 2202 aaKnown RBP4.48□□□□□ -1.69
LSM5-210ENST00000480956 H3BRM9 83 aa4.48□□□□□ -1.69
LSM5-210ENST00000480956 RPL38P63173 70 aaKnown RBP4.48□□□□□ -1.69
LSM5-210ENST00000480956 SYS1-DBNDD2H3BUS1 97 aa4.47□□□□□ -1.69
LSM5-210ENST00000480956 DMAC1Q96GE9 116 aa4.47□□□□□ -1.69
LSM5-210ENST00000480956 NXT2Q9NPJ8 142 aaKnown RBP4.47□□□□□ -1.69
LSM5-210ENST00000480956 MRPL36Q9P0J6 103 aaKnown RBP4.47□□□□□ -1.69
LSM5-210ENST00000480956 A0A1W2PNU3 283 aaPredicted RBP4.46□□□□□ -1.69
LSM5-210ENST00000480956 MANBALQ9NQG1 85 aa4.46□□□□□ -1.69
LSM5-210ENST00000480956 OTOGLQ3ZCN5 2332 aa4.46□□□□□ -1.7
LSM5-210ENST00000480956 ZNF292O60281 2723 aa4.46□□□□□ -1.7
LSM5-210ENST00000480956 TRAV23DV6A0A075B6W5 121 aa4.46□□□□□ -1.7
LSM5-210ENST00000480956 PDCD5O14737 125 aa4.46□□□□□ -1.7
LSM5-210ENST00000480956 Q5BKY6 102 aa4.46□□□□□ -1.7
LSM5-210ENST00000480956 ZNF818PQ6ZRF7 136 aa4.46□□□□□ -1.7
LSM5-210ENST00000480956 DCHS1Q96JQ0 3298 aa4.45□□□□□ -1.7
LSM5-210ENST00000480956 A0A0J9YY99 117 aa4.45□□□□□ -1.7
LSM5-210ENST00000480956 SPACA4Q8TDM5 124 aa4.45□□□□□ -1.7
LSM5-210ENST00000480956 U3KQA8 63 aa4.45□□□□□ -1.7
LSM5-210ENST00000480956 ZFHX4Q86UP3 3567 aa4.45□□□□□ -1.7
LSM5-210ENST00000480956 RIF1Q5UIP0 2472 aaKnown RBP4.44□□□□□ -1.7
LSM5-210ENST00000480956 NUPR2A6NF83 97 aa4.44□□□□□ -1.7
LSM5-210ENST00000480956 C10orf128Q5T292 105 aa4.44□□□□□ -1.7
LSM5-210ENST00000480956 ODF3Q96PU9 254 aa4.44□□□□□ -1.7
LSM5-210ENST00000480956 AMELYQ99218 206 aa4.44□□□□□ -1.7
LSM5-210ENST00000480956 GAS8-AS1O95177 125 aa4.43□□□□□ -1.7
LSM5-210ENST00000480956 ETDBQ3ZM63 59 aa4.43□□□□□ -1.7
LSM5-210ENST00000480956 CYP2G1PQ6ZSU1 146 aa4.43□□□□□ -1.7
LSM5-210ENST00000480956 LAMA5O15230 3695 aa4.43□□□□□ -1.7
LSM5-210ENST00000480956 GVINP1Q7Z2Y8 2422 aa4.43□□□□□ -1.7
LSM5-210ENST00000480956 SPTBN2O15020 2390 aa4.43□□□□□ -1.7
LSM5-210ENST00000480956 H0YGG7 62 aa4.43□□□□□ -1.7
LSM5-210ENST00000480956 DEFB124Q8NES8 71 aa4.43□□□□□ -1.7
LSM5-210ENST00000480956 LIMD2Q9BT23 127 aa4.43□□□□□ -1.7
LSM5-210ENST00000480956 CEP250Q9BV73 2442 aa4.43□□□□□ -1.7
LSM5-210ENST00000480956 AKAP13Q12802 2813 aa4.42□□□□□ -1.7
LSM5-210ENST00000480956 UBE2D1P51668 147 aa4.42□□□□□ -1.7
LSM5-210ENST00000480956 KRTAP13-2Q52LG2 175 aa4.42□□□□□ -1.7
LSM5-210ENST00000480956 CYSTM1Q9H1C7 97 aa4.42□□□□□ -1.7
LSM5-210ENST00000480956 MED12LQ86YW9 2145 aa4.42□□□□□ -1.7
LSM5-210ENST00000480956 CNOT1A5YKK6 2376 aaKnown RBP4.42□□□□□ -1.7
LSM5-210ENST00000480956 TRBV7-3A0A075B6L6 115 aa4.41□□□□□ -1.7
LSM5-210ENST00000480956 A0A1W2PNN7 141 aa4.41□□□□□ -1.7
LSM5-210ENST00000480956 A0A1W2PPM0 123 aa4.41□□□□□ -1.7
LSM5-210ENST00000480956 FRYQ5TBA9 3013 aa4.41□□□□□ -1.7
LSM5-210ENST00000480956 FAM186AA6NE01 2351 aa4.41□□□□□ -1.7
LSM5-210ENST00000480956 TEX49A0A1B0GTD5 131 aa4.41□□□□□ -1.7
LSM5-210ENST00000480956 FAM167A-AS1Q96KT0 104 aa4.41□□□□□ -1.7
LSM5-210ENST00000480956 PRO1854Q9UHT4 67 aa4.41□□□□□ -1.7
LSM5-210ENST00000480956 COL5A1P20908 1838 aaPredicted RBP4.4□□□□□ -1.7
LSM5-210ENST00000480956 PRR9Q5T870 116 aa4.4□□□□□ -1.71
LSM5-210ENST00000480956 CFAP47Q6ZTR5 3102 aa4.4□□□□□ -1.71
LSM5-210ENST00000480956 PTPRZ1P23471 2315 aaPredicted RBP4.39□□□□□ -1.71
LSM5-210ENST00000480956 TRBV6-4A0A1B0GX49 114 aa4.39□□□□□ -1.71
LSM5-210ENST00000480956 S100A3P33764 101 aa4.39□□□□□ -1.71
LSM5-210ENST00000480956 V9GYH0 126 aa4.39□□□□□ -1.71
LSM5-210ENST00000480956 SPTBN4Q9H254 2564 aa4.39□□□□□ -1.71
LSM5-210ENST00000480956 SPENQ96T58 3664 aaKnown RBP4.39□□□□□ -1.71
LSM5-210ENST00000480956 LOC400499M0QZD8 3231 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 IGKV3-7A0A075B6H7 116 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 SDHAF1A6NFY7 115 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 IGLC2P0DOY2 106 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 IGLC3P0DOY3 106 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 LINC00315P59091 139 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 MPDZO75970 2070 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 ZGRF1Q86YA3 2104 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 H7BZZ5 65 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 IGHV3-30P01768 117 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 IGHV3-30-5P0DP03 117 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 UBE2D3P61077 147 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 UBE2D2P62837 147 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 WFDC2Q14508 124 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 NMSQ5H8A3 153 aa4.38□□□□□ -1.71
LSM5-210ENST00000480956 CEP295Q9C0D2 2601 aa4.37□□□□□ -1.71
LSM5-210ENST00000480956 IGKV2-24A0A0C4DH68 120 aa4.37□□□□□ -1.71
LSM5-210ENST00000480956 H3BRN7 92 aa4.37□□□□□ -1.71
LSM5-210ENST00000480956 PPYP01298 95 aa4.37□□□□□ -1.71
LSM5-210ENST00000480956 Q8N6K4 173 aa4.37□□□□□ -1.71
LSM5-210ENST00000480956 HIGD1BQ9P298 99 aa4.37□□□□□ -1.71
LSM5-210ENST00000480956 TRAV22A0A0B4J277 110 aa4.36□□□□□ -1.71
LSM5-210ENST00000480956 BVES-AS1Q5T3Y7 98 aa4.36□□□□□ -1.71
LSM5-210ENST00000480956 SHANK1Q9Y566 2161 aa4.36□□□□□ -1.71
LSM5-210ENST00000480956 AHCTF1Q8WYP5 2266 aa4.35□□□□□ -1.71
LSM5-210ENST00000480956 KANTRA0A1W2PQU2 76 aa4.35□□□□□ -1.71
LSM5-210ENST00000480956 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
LSM5-210ENST00000480956 EDDM3BP56851 147 aa4.35□□□□□ -1.71
LSM5-210ENST00000480956 MED13Q9UHV7 2174 aa4.35□□□□□ -1.71
LSM5-210ENST00000480956 KLK9Q9UKQ9 250 aa4.35□□□□□ -1.71
LSM5-210ENST00000480956 KNTC1P50748 2209 aa4.35□□□□□ -1.71
LSM5-210ENST00000480956 BOD1L1Q8NFC6 3051 aa4.34□□□□□ -1.71
LSM5-210ENST00000480956 A8MU10 97 aa4.34□□□□□ -1.71
LSM5-210ENST00000480956 JMJD7-PLA2G4BH0Y9G9 81 aa4.34□□□□□ -1.71
LSM5-210ENST00000480956 CFDP00746 253 aaPredicted RBP4.34□□□□□ -1.71
LSM5-210ENST00000480956 HMGN2P05204 90 aaKnown RBP4.34□□□□□ -1.71
LSM5-210ENST00000480956 PDE6GP18545 87 aa4.34□□□□□ -1.71
LSM5-210ENST00000480956 C10orf55Q5SWW7 151 aa4.34□□□□□ -1.71
LSM5-210ENST00000480956 Q5VV11 94 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms