RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CEMP1Q6PRD7 247 aaPredicted RBP7.13□□□□□ -1.27
VEGFA-212ENST00000480614 MRGPRG-AS1Q2M3A8 158 aa7.13□□□□□ -1.27
VEGFA-212ENST00000480614 MUC22E2RYF6 1773 aaPredicted RBP7.12□□□□□ -1.27
VEGFA-212ENST00000480614 TRBV6-5A0A0K0K1A5 114 aa7.12□□□□□ -1.27
VEGFA-212ENST00000480614 IGLV2-8P01709 118 aa7.12□□□□□ -1.27
VEGFA-212ENST00000480614 Q8NA96 180 aa7.12□□□□□ -1.27
VEGFA-212ENST00000480614 MLST8Q9BVC4 326 aa7.12□□□□□ -1.27
VEGFA-212ENST00000480614 IGLV4-69A0A075B6H9 119 aa7.11□□□□□ -1.27
VEGFA-212ENST00000480614 ZNF80P51504 273 aaPredicted RBP7.11□□□□□ -1.27
VEGFA-212ENST00000480614 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.1□□□□□ -1.27
VEGFA-212ENST00000480614 ZFAND3Q9H8U3 227 aa7.1□□□□□ -1.27
VEGFA-212ENST00000480614 KPRPQ5T749 579 aaPredicted RBP7.1□□□□□ -1.27
VEGFA-212ENST00000480614 MBD6Q96DN6 1003 aa7.1□□□□□ -1.27
VEGFA-212ENST00000480614 C6orf99Q4VX62 202 aa7.09□□□□□ -1.27
VEGFA-212ENST00000480614 COX7CP15954 63 aa7.09□□□□□ -1.27
VEGFA-212ENST00000480614 Q8N976 141 aa7.09□□□□□ -1.27
VEGFA-212ENST00000480614 COL4A3Q01955 1670 aa7.09□□□□□ -1.27
VEGFA-212ENST00000480614 WFDC11Q8NEX6 87 aa7.09□□□□□ -1.27
VEGFA-212ENST00000480614 LY6LH3BQJ8 138 aa7.09□□□□□ -1.27
VEGFA-212ENST00000480614 C3orf84H3BNL1 204 aa7.09□□□□□ -1.28
VEGFA-212ENST00000480614 HELZ2Q9BYK8 2649 aaKnown RBP7.08□□□□□ -1.28
VEGFA-212ENST00000480614 GDF5OSQ5U4N7 250 aa7.08□□□□□ -1.28
VEGFA-212ENST00000480614 C10orf25Q5T742 122 aa7.08□□□□□ -1.28
VEGFA-212ENST00000480614 TP53TG3Q9ULZ0 132 aa7.08□□□□□ -1.28
VEGFA-212ENST00000480614 Q8IZM0 81 aa7.08□□□□□ -1.28
VEGFA-212ENST00000480614 ZNF73O43830 326 aaPredicted RBP7.08□□□□□ -1.28
VEGFA-212ENST00000480614 PSMG3-AS1Q96PY0 264 aa7.08□□□□□ -1.28
VEGFA-212ENST00000480614 FLNAP21333 2647 aaKnown RBP7.08□□□□□ -1.28
VEGFA-212ENST00000480614 UBE2D2P62837 147 aa7.07□□□□□ -1.28
VEGFA-212ENST00000480614 RNF185Q96GF1 192 aa7.07□□□□□ -1.28
VEGFA-212ENST00000480614 A0A096LNI7 61 aa7.07□□□□□ -1.28
VEGFA-212ENST00000480614 C1orf195Q5TG92 126 aa7.07□□□□□ -1.28
VEGFA-212ENST00000480614 XAGE1AQ9HD64 81 aa7.07□□□□□ -1.28
VEGFA-212ENST00000480614 NBEAL1Q6ZS30 2694 aa7.07□□□□□ -1.28
VEGFA-212ENST00000480614 RPL28P46779 137 aaKnown RBP7.07□□□□□ -1.28
VEGFA-212ENST00000480614 LST1O00453 97 aa7.07□□□□□ -1.28
VEGFA-212ENST00000480614 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
VEGFA-212ENST00000480614 SLPIP03973 132 aa7.07□□□□□ -1.28
VEGFA-212ENST00000480614 SCXQ7RTU7 201 aa7.07□□□□□ -1.28
VEGFA-212ENST00000480614 TSHBP01222 138 aa7.06□□□□□ -1.28
VEGFA-212ENST00000480614 EIF4EBP1Q13541 118 aaPredicted RBP7.06□□□□□ -1.28
VEGFA-212ENST00000480614 CHCHD7Q9BUK0 85 aa7.06□□□□□ -1.28
VEGFA-212ENST00000480614 Q6JHZ5 121 aa7.06□□□□□ -1.28
VEGFA-212ENST00000480614 KLLNB2CW77 178 aa7.06□□□□□ -1.28
VEGFA-212ENST00000480614 PLA2G5P39877 138 aa7.06□□□□□ -1.28
VEGFA-212ENST00000480614 SPINK6Q6UWN8 80 aa7.06□□□□□ -1.28
VEGFA-212ENST00000480614 WFDC13Q8IUB5 93 aa7.06□□□□□ -1.28
VEGFA-212ENST00000480614 F8WDY8 70 aa7.06□□□□□ -1.28
VEGFA-212ENST00000480614 Q6ZSV7 163 aa7.05□□□□□ -1.28
VEGFA-212ENST00000480614 NRACQ8N912 160 aa7.05□□□□□ -1.28
VEGFA-212ENST00000480614 CLUHP3Q96NS8 147 aa7.05□□□□□ -1.28
VEGFA-212ENST00000480614 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.05□□□□□ -1.28
VEGFA-212ENST00000480614 A0A0U1RQV1 116 aa7.05□□□□□ -1.28
VEGFA-212ENST00000480614 Q6ZQY7 126 aa7.05□□□□□ -1.28
VEGFA-212ENST00000480614 C2orf91Q6ZV80 131 aa7.05□□□□□ -1.28
VEGFA-212ENST00000480614 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
VEGFA-212ENST00000480614 PLAC8L1A1L4L8 177 aa7.04□□□□□ -1.28
VEGFA-212ENST00000480614 NUPR2A6NF83 97 aa7.04□□□□□ -1.28
VEGFA-212ENST00000480614 TRAV7A0A075B6U4 112 aa7.04□□□□□ -1.28
VEGFA-212ENST00000480614 M0QXV9 152 aa7.04□□□□□ -1.28
VEGFA-212ENST00000480614 CCDC179H3BU77 68 aa7.03□□□□□ -1.28
VEGFA-212ENST00000480614 FRMD6-AS1P0C7T7 363 aa7.03□□□□□ -1.28
VEGFA-212ENST00000480614 NOTCH1P46531 2555 aa7.03□□□□□ -1.28
VEGFA-212ENST00000480614 Q6ZVQ6 151 aa7.03□□□□□ -1.28
VEGFA-212ENST00000480614 BBC3Q96PG8 261 aaPredicted RBP7.03□□□□□ -1.28
VEGFA-212ENST00000480614 IGKV2-28A0A075B6P5 120 aa7.03□□□□□ -1.28
VEGFA-212ENST00000480614 IGKV2D-28P01615 120 aa7.03□□□□□ -1.28
VEGFA-212ENST00000480614 ITPR3Q14573 2671 aa7.03□□□□□ -1.28
VEGFA-212ENST00000480614 INAFM1C9JVW0 142 aa7.03□□□□□ -1.28
VEGFA-212ENST00000480614 MSMPQ1L6U9 139 aa7.03□□□□□ -1.28
VEGFA-212ENST00000480614 CNFNQ9BYD5 112 aa7.03□□□□□ -1.28
VEGFA-212ENST00000480614 IGLV2-11P01706 119 aa7.02□□□□□ -1.29
VEGFA-212ENST00000480614 LINC00959A0A1B0GUT2 108 aa7.02□□□□□ -1.29
VEGFA-212ENST00000480614 DCANP1Q8TF63 244 aa7.02□□□□□ -1.29
VEGFA-212ENST00000480614 A0A1W2PNU3 283 aaPredicted RBP7.02□□□□□ -1.29
VEGFA-212ENST00000480614 MRPS12O15235 138 aaKnown RBP7.02□□□□□ -1.29
VEGFA-212ENST00000480614 LINC00526Q96FQ7 95 aa7.02□□□□□ -1.29
VEGFA-212ENST00000480614 CRIP1P50238 77 aa7.02□□□□□ -1.29
VEGFA-212ENST00000480614 XGP55808 180 aa7.02□□□□□ -1.29
VEGFA-212ENST00000480614 BAHCC1Q9P281 2608 aa7.01□□□□□ -1.29
VEGFA-212ENST00000480614 PRYO14603 147 aa7.01□□□□□ -1.29
VEGFA-212ENST00000480614 EGFEM1PQ0D2K5 195 aa7.01□□□□□ -1.29
VEGFA-212ENST00000480614 SNURFQ9Y675 71 aa7.01□□□□□ -1.29
VEGFA-212ENST00000480614 MAPKAPK5-AS1Q8N8E1 139 aa7□□□□□ -1.29
VEGFA-212ENST00000480614 IGLV9-49A0A0B4J1Y8 123 aa7□□□□□ -1.29
VEGFA-212ENST00000480614 C11orf71Q6IPW1 123 aa7□□□□□ -1.29
VEGFA-212ENST00000480614 SMIM11BQ8TCY0 68 aa7□□□□□ -1.29
VEGFA-212ENST00000480614 A0A0J9YWU9 116 aa6.99□□□□□ -1.29
VEGFA-212ENST00000480614 RNASE3P12724 160 aaKnown RBP6.99□□□□□ -1.29
VEGFA-212ENST00000480614 POLR2KP53803 58 aaKnown RBP6.99□□□□□ -1.29
VEGFA-212ENST00000480614 HRCT1Q6UXD1 115 aa6.99□□□□□ -1.29
VEGFA-212ENST00000480614 NTM-AS1Q6ZSK4 140 aa6.99□□□□□ -1.29
VEGFA-212ENST00000480614 Q8N6K4 173 aa6.99□□□□□ -1.29
VEGFA-212ENST00000480614 ZNF702PQ9H963 129 aa6.99□□□□□ -1.29
VEGFA-212ENST00000480614 BRWD1-AS2P59051 145 aa6.99□□□□□ -1.29
VEGFA-212ENST00000480614 REG3GQ6UW15 175 aa6.98□□□□□ -1.29
VEGFA-212ENST00000480614 PPDPFQ9H3Y8 114 aa6.98□□□□□ -1.29
VEGFA-212ENST00000480614 CR1P17927 2039 aa6.98□□□□□ -1.29
VEGFA-212ENST00000480614 CDC42SE2Q9NRR3 84 aa6.98□□□□□ -1.29
VEGFA-212ENST00000480614 Q8N814 137 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms