RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 MBP02144 154 aa6.29□□□□□ -1.4
USP11-208ENST00000480104 PNRC1Q12796 327 aaPredicted RBP6.29□□□□□ -1.4
USP11-208ENST00000480104 BAGE2Q86Y30 109 aa6.29□□□□□ -1.4
USP11-208ENST00000480104 MT1FP04733 61 aa6.28□□□□□ -1.4
USP11-208ENST00000480104 LYZL1Q6UWQ5 148 aa6.28□□□□□ -1.4
USP11-208ENST00000480104 TCEAL7Q9BRU2 100 aa6.28□□□□□ -1.4
USP11-208ENST00000480104 CSDC2Q9Y534 153 aaKnown RBP6.28□□□□□ -1.4
USP11-208ENST00000480104 F2Z2F3 143 aa6.27□□□□□ -1.41
USP11-208ENST00000480104 SLC25A20O43772 301 aa6.27□□□□□ -1.41
USP11-208ENST00000480104 Q6Q795 121 aa6.27□□□□□ -1.41
USP11-208ENST00000480104 PPP1R1CQ8WVI7 109 aa6.27□□□□□ -1.41
USP11-208ENST00000480104 PSMG3Q9BT73 122 aaPredicted RBP6.27□□□□□ -1.41
USP11-208ENST00000480104 C9orf92A6NGG3 77 aa6.26□□□□□ -1.41
USP11-208ENST00000480104 RPL32P62910 135 aaKnown RBP6.26□□□□□ -1.41
USP11-208ENST00000480104 CST9LP1Q5W188 147 aa6.26□□□□□ -1.41
USP11-208ENST00000480104 TRBV6-5A0A0K0K1A5 114 aa6.25□□□□□ -1.41
USP11-208ENST00000480104 RPS20P60866 119 aaKnown RBP6.25□□□□□ -1.41
USP11-208ENST00000480104 RPS29P62273 56 aaKnown RBP6.25□□□□□ -1.41
USP11-208ENST00000480104 SERF2P84101 59 aa6.25□□□□□ -1.41
USP11-208ENST00000480104 TWIST1Q15672 202 aa6.25□□□□□ -1.41
USP11-208ENST00000480104 LINC00299Q6ZSB3 139 aa6.25□□□□□ -1.41
USP11-208ENST00000480104 FAM19A1Q7Z5A9 133 aa6.25□□□□□ -1.41
USP11-208ENST00000480104 TNFSF18Q9UNG2 199 aa6.25□□□□□ -1.41
USP11-208ENST00000480104 IGKV2-28A0A075B6P5 120 aa6.24□□□□□ -1.41
USP11-208ENST00000480104 CTXND1A0A1B0GTU2 59 aa6.24□□□□□ -1.41
USP11-208ENST00000480104 SCO2A0A1W2PP80 73 aa6.24□□□□□ -1.41
USP11-208ENST00000480104 IGKV2D-28P01615 120 aa6.24□□□□□ -1.41
USP11-208ENST00000480104 S100A9P06702 114 aaKnown RBP6.24□□□□□ -1.41
USP11-208ENST00000480104 S100A5P33763 92 aa6.24□□□□□ -1.41
USP11-208ENST00000480104 FHITP49789 147 aa6.24□□□□□ -1.41
USP11-208ENST00000480104 SPRR4Q96PI1 79 aa6.24□□□□□ -1.41
USP11-208ENST00000480104 MPC2O95563 127 aa6.23□□□□□ -1.41
USP11-208ENST00000480104 H2AFB2P0C5Z0 115 aa6.23□□□□□ -1.41
USP11-208ENST00000480104 TEX261Q6UWH6 196 aa6.23□□□□□ -1.41
USP11-208ENST00000480104 CBLN2Q8IUK8 224 aa6.23□□□□□ -1.41
USP11-208ENST00000480104 CCDC32Q9BV29 185 aa6.23□□□□□ -1.41
USP11-208ENST00000480104 RAB19A4D1S5 217 aa6.22□□□□□ -1.41
USP11-208ENST00000480104 PLA2G10O15496 165 aa6.22□□□□□ -1.41
USP11-208ENST00000480104 PET100P0DJ07 73 aa6.22□□□□□ -1.41
USP11-208ENST00000480104 FAM210AQ96ND0 272 aa6.22□□□□□ -1.41
USP11-208ENST00000480104 ST20Q9HBF5 79 aa6.22□□□□□ -1.41
USP11-208ENST00000480104 TGIF2-C20orf24A0A0A6YYL0 155 aa6.21□□□□□ -1.42
USP11-208ENST00000480104 TRBV27A0A0K0K1C4 114 aa6.21□□□□□ -1.42
USP11-208ENST00000480104 LYRM1O43325 122 aa6.21□□□□□ -1.42
USP11-208ENST00000480104 IFNA1P01562 189 aa6.21□□□□□ -1.42
USP11-208ENST00000480104 IL7P13232 177 aa6.21□□□□□ -1.42
USP11-208ENST00000480104 H2BFSP57053 126 aa6.21□□□□□ -1.42
USP11-208ENST00000480104 SMAGPQ0VAQ4 97 aa6.21□□□□□ -1.42
USP11-208ENST00000480104 HIGD2AQ9BW72 106 aa6.21□□□□□ -1.42
USP11-208ENST00000480104 TMEM238C9JI98 176 aa6.2□□□□□ -1.42
USP11-208ENST00000480104 SCO1O75880 301 aa6.2□□□□□ -1.42
USP11-208ENST00000480104 POLR2KP53803 58 aaKnown RBP6.2□□□□□ -1.42
USP11-208ENST00000480104 S100ZQ8WXG8 99 aa6.2□□□□□ -1.42
USP11-208ENST00000480104 GNB1LQ9BYB4 327 aa6.2□□□□□ -1.42
USP11-208ENST00000480104 CNFNQ9BYD5 112 aa6.2□□□□□ -1.42
USP11-208ENST00000480104 XKRY2A2RUG3 117 aa6.19□□□□□ -1.42
USP11-208ENST00000480104 FCER1GP30273 86 aa6.19□□□□□ -1.42
USP11-208ENST00000480104 KRTAP10-10P60014 251 aa6.19□□□□□ -1.42
USP11-208ENST00000480104 C9orf62Q8N4C0 152 aa6.19□□□□□ -1.42
USP11-208ENST00000480104 FAM104AQ969W3 186 aa6.19□□□□□ -1.42
USP11-208ENST00000480104 TMEM126AQ9H061 195 aa6.19□□□□□ -1.42
USP11-208ENST00000480104 IGLV5-37A0A075B6J1 123 aa6.18□□□□□ -1.42
USP11-208ENST00000480104 MAP1LC3B2A6NCE7 125 aa6.18□□□□□ -1.42
USP11-208ENST00000480104 IFITM10A6NMD0 228 aa6.18□□□□□ -1.42
USP11-208ENST00000480104 PAGE4O60829 102 aa6.18□□□□□ -1.42
USP11-208ENST00000480104 NKAPP1Q8N9T2 125 aa6.18□□□□□ -1.42
USP11-208ENST00000480104 TIMM21Q9BVV7 248 aa6.18□□□□□ -1.42
USP11-208ENST00000480104 MAP1LC3BQ9GZQ8 125 aa6.18□□□□□ -1.42
USP11-208ENST00000480104 RPL35P42766 123 aaKnown RBP6.16□□□□□ -1.42
USP11-208ENST00000480104 CKS1BP61024 79 aa6.16□□□□□ -1.42
USP11-208ENST00000480104 SMIM15Q7Z3B0 74 aa6.16□□□□□ -1.42
USP11-208ENST00000480104 M0R378 163 aa6.15□□□□□ -1.42
USP11-208ENST00000480104 KRTAP2-3P0C7H8 128 aa6.15□□□□□ -1.42
USP11-208ENST00000480104 MOBPQ13875 183 aa6.15□□□□□ -1.42
USP11-208ENST00000480104 TMUB2Q71RG4 321 aa6.15□□□□□ -1.42
USP11-208ENST00000480104 KRTAP2-4Q9BYR9 128 aa6.15□□□□□ -1.42
USP11-208ENST00000480104 ZNF706Q9Y5V0 76 aaPredicted RBP6.15□□□□□ -1.42
USP11-208ENST00000480104 PRSS2P07478 247 aa6.14□□□□□ -1.43
USP11-208ENST00000480104 RPL37P61927 97 aaKnown RBP6.14□□□□□ -1.43
USP11-208ENST00000480104 HBBP68871 147 aa6.14□□□□□ -1.43
USP11-208ENST00000480104 TOMM7Q9P0U1 55 aa6.14□□□□□ -1.43
USP11-208ENST00000480104 RPL39P62891 51 aaKnown RBP6.13□□□□□ -1.43
USP11-208ENST00000480104 CENPWQ5EE01 88 aa6.13□□□□□ -1.43
USP11-208ENST00000480104 VCYO14598 125 aa6.12□□□□□ -1.43
USP11-208ENST00000480104 PFDN1O60925 122 aa6.12□□□□□ -1.43
USP11-208ENST00000480104 GEMIN7Q9H840 131 aaKnown RBP6.12□□□□□ -1.43
USP11-208ENST00000480104 IGLV9-49A0A0B4J1Y8 123 aa6.11□□□□□ -1.43
USP11-208ENST00000480104 IGLV6-57P01721 117 aa6.11□□□□□ -1.43
USP11-208ENST00000480104 C6orf226Q5I0X4 101 aa6.11□□□□□ -1.43
USP11-208ENST00000480104 AKR1C8PQ5T2L2 129 aa6.11□□□□□ -1.43
USP11-208ENST00000480104 TMEM18Q96B42 140 aa6.11□□□□□ -1.43
USP11-208ENST00000480104 LGALS3P17931 250 aaKnown RBP6.1□□□□□ -1.43
USP11-208ENST00000480104 RGS21Q2M5E4 152 aa6.1□□□□□ -1.43
USP11-208ENST00000480104 FAM240BA0A1B0GVZ2 78 aa6.09□□□□□ -1.43
USP11-208ENST00000480104 F8VRH5 84 aa6.09□□□□□ -1.43
USP11-208ENST00000480104 MRPS36P82909 103 aaKnown RBP6.09□□□□□ -1.43
USP11-208ENST00000480104 RPL7L1Q6DKI1 246 aaKnown RBP6.09□□□□□ -1.43
USP11-208ENST00000480104 Q8IZM0 81 aa6.09□□□□□ -1.43
USP11-208ENST00000480104 SPANXA1Q9NS26 97 aa6.09□□□□□ -1.43
USP11-208ENST00000480104 SSBP3-AS1Q7Z2R9 100 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms