RNA–Protein interactions for RNA: ENST00000479896.1

PTPRE-208, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 5,736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-208ENST00000479896 LST1O00453 97 aa9.02□□□□□ -0.97
PTPRE-208ENST00000479896 BRI3O95415 125 aa9.02□□□□□ -0.97
PTPRE-208ENST00000479896 ODF3L2Q3SX64 289 aa9.02□□□□□ -0.97
PTPRE-208ENST00000479896 RNASE8Q8TDE3 154 aaKnown RBP9.01□□□□□ -0.97
PTPRE-208ENST00000479896 PTPRQQ9UMZ3 2332 aa9.01□□□□□ -0.97
PTPRE-208ENST00000479896 POLR2KP53803 58 aaKnown RBP9.01□□□□□ -0.97
PTPRE-208ENST00000479896 C11orf21Q9P2W6 132 aa9.01□□□□□ -0.97
PTPRE-208ENST00000479896 TP73-AS1Q9UF72 201 aa9.01□□□□□ -0.97
PTPRE-208ENST00000479896 C6orf223Q8N319 242 aa9.01□□□□□ -0.97
PTPRE-208ENST00000479896 ZNF106Q9H2Y7 1883 aaKnown RBP9.01□□□□□ -0.97
PTPRE-208ENST00000479896 F8WDY8 70 aa9□□□□□ -0.97
PTPRE-208ENST00000479896 NHLRC4P0CG21 123 aaPredicted RBP9□□□□□ -0.97
PTPRE-208ENST00000479896 CDSNQ15517 529 aa9□□□□□ -0.97
PTPRE-208ENST00000479896 CREBBPQ92793 2442 aa8.99□□□□□ -0.97
PTPRE-208ENST00000479896 ESRGQ1W209 222 aa8.99□□□□□ -0.97
PTPRE-208ENST00000479896 C1orf137Q5JT78 98 aa8.99□□□□□ -0.97
PTPRE-208ENST00000479896 Q6ZTC4 211 aa8.99□□□□□ -0.97
PTPRE-208ENST00000479896 MT-ATP8P03928 68 aa8.99□□□□□ -0.97
PTPRE-208ENST00000479896 LINC01556Q5JQF7 62 aa8.98□□□□□ -0.97
PTPRE-208ENST00000479896 UNQ6190/PRO20217Q6UXQ8 127 aa8.98□□□□□ -0.97
PTPRE-208ENST00000479896 MRPS12O15235 138 aaKnown RBP8.98□□□□□ -0.97
PTPRE-208ENST00000479896 FAM30AQ9NZY2 134 aa8.98□□□□□ -0.97
PTPRE-208ENST00000479896 Q6JHZ5 121 aa8.97□□□□□ -0.97
PTPRE-208ENST00000479896 ALPK3Q96L96 1907 aa8.97□□□□□ -0.97
PTPRE-208ENST00000479896 CRIP2P52943 208 aaPredicted RBP8.96□□□□□ -0.97
PTPRE-208ENST00000479896 PLCE1Q9P212 2302 aa8.96□□□□□ -0.98
PTPRE-208ENST00000479896 SNURFQ9Y675 71 aa8.95□□□□□ -0.98
PTPRE-208ENST00000479896 A6NED7 52 aa8.95□□□□□ -0.98
PTPRE-208ENST00000479896 PRYO14603 147 aa8.95□□□□□ -0.98
PTPRE-208ENST00000479896 SERP2Q8N6R1 65 aa8.95□□□□□ -0.98
PTPRE-208ENST00000479896 IGHV6-1A0A0B4J1U7 121 aa8.94□□□□□ -0.98
PTPRE-208ENST00000479896 FHL2Q14192 279 aa8.94□□□□□ -0.98
PTPRE-208ENST00000479896 EDN2P20800 178 aa8.94□□□□□ -0.98
PTPRE-208ENST00000479896 KIAA1549LQ6ZVL6 1849 aa8.94□□□□□ -0.98
PTPRE-208ENST00000479896 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
PTPRE-208ENST00000479896 LINC00242Q5T6M2 205 aa8.94□□□□□ -0.98
PTPRE-208ENST00000479896 POM121L12Q8N7R1 296 aa8.94□□□□□ -0.98
PTPRE-208ENST00000479896 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
PTPRE-208ENST00000479896 LIMD2Q9BT23 127 aa8.93□□□□□ -0.98
PTPRE-208ENST00000479896 PRR4Q16378 134 aa8.93□□□□□ -0.98
PTPRE-208ENST00000479896 ZNF580Q9UK33 172 aa8.93□□□□□ -0.98
PTPRE-208ENST00000479896 DSCAMO60469 2012 aa8.93□□□□□ -0.98
PTPRE-208ENST00000479896 Q9BRP9 147 aa8.92□□□□□ -0.98
PTPRE-208ENST00000479896 NUP210LQ5VU65 1888 aa8.92□□□□□ -0.98
PTPRE-208ENST00000479896 NTM-AS1Q6ZSK4 140 aa8.92□□□□□ -0.98
PTPRE-208ENST00000479896 MED13LQ71F56 2210 aa8.92□□□□□ -0.98
PTPRE-208ENST00000479896 C2orf48Q96LS8 159 aa8.91□□□□□ -0.98
PTPRE-208ENST00000479896 CNFNQ9BYD5 112 aa8.91□□□□□ -0.98
PTPRE-208ENST00000479896 C9orf116Q5BN46 136 aaPredicted RBP8.91□□□□□ -0.98
PTPRE-208ENST00000479896 TNCP24821 2201 aa8.91□□□□□ -0.98
PTPRE-208ENST00000479896 X6R8D5 127 aa8.91□□□□□ -0.98
PTPRE-208ENST00000479896 NCOA6Q14686 2063 aaPredicted RBP8.9□□□□□ -0.98
PTPRE-208ENST00000479896 SMIM1B2RUZ4 78 aa8.9□□□□□ -0.98
PTPRE-208ENST00000479896 Q8N814 137 aa8.9□□□□□ -0.98
PTPRE-208ENST00000479896 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
PTPRE-208ENST00000479896 LYPD5Q6UWN5 251 aa8.89□□□□□ -0.99
PTPRE-208ENST00000479896 RETNLBQ9BQ08 111 aa8.89□□□□□ -0.99
PTPRE-208ENST00000479896 IGLV4-60A0A075B6I1 120 aa8.89□□□□□ -0.99
PTPRE-208ENST00000479896 COX6A2Q02221 97 aa8.88□□□□□ -0.99
PTPRE-208ENST00000479896 LINC00337Q8N6G1 96 aa8.88□□□□□ -0.99
PTPRE-208ENST00000479896 GAS8-AS1O95177 125 aa8.87□□□□□ -0.99
PTPRE-208ENST00000479896 CELA1Q9UNI1 258 aa8.87□□□□□ -0.99
PTPRE-208ENST00000479896 SHANK1Q9Y566 2161 aa8.87□□□□□ -0.99
PTPRE-208ENST00000479896 CSDC2Q9Y534 153 aaKnown RBP8.87□□□□□ -0.99
PTPRE-208ENST00000479896 FHL3Q13643 280 aa8.85□□□□□ -0.99
PTPRE-208ENST00000479896 LINC00208Q96KT6 92 aa8.85□□□□□ -0.99
PTPRE-208ENST00000479896 TRBV7-6A0A0J9YX20 115 aa8.85□□□□□ -0.99
PTPRE-208ENST00000479896 OTOGLQ3ZCN5 2332 aa8.85□□□□□ -0.99
PTPRE-208ENST00000479896 A0A1B0GUV1 79 aa8.85□□□□□ -0.99
PTPRE-208ENST00000479896 A0A0U1RQV1 116 aa8.85□□□□□ -0.99
PTPRE-208ENST00000479896 LINC00694P0DN24 101 aa8.85□□□□□ -0.99
PTPRE-208ENST00000479896 LINC01561Q8N1V8 128 aa8.85□□□□□ -0.99
PTPRE-208ENST00000479896 BEAN1Q3B7T3 259 aa8.84□□□□□ -0.99
PTPRE-208ENST00000479896 C2orf91Q6ZV80 131 aa8.84□□□□□ -0.99
PTPRE-208ENST00000479896 COX7CP15954 63 aa8.83□□□□□ -1
PTPRE-208ENST00000479896 Q8N2B8 174 aa8.83□□□□□ -1
PTPRE-208ENST00000479896 YPEL4Q96NS1 127 aa8.83□□□□□ -1
PTPRE-208ENST00000479896 PRR3P79522 188 aaKnown RBP8.82□□□□□ -1
PTPRE-208ENST00000479896 LINC01547P58512 204 aaPredicted RBP8.82□□□□□ -1
PTPRE-208ENST00000479896 MDFIQ99750 246 aa8.82□□□□□ -1
PTPRE-208ENST00000479896 TRAV7A0A075B6U4 112 aa8.81□□□□□ -1
PTPRE-208ENST00000479896 A0A087WYN8 130 aa8.81□□□□□ -1
PTPRE-208ENST00000479896 A0A087WSZ3 146 aa8.81□□□□□ -1
PTPRE-208ENST00000479896 SPINK1P00995 79 aa8.8□□□□□ -1
PTPRE-208ENST00000479896 A0A1W2PPR1 153 aa8.8□□□□□ -1
PTPRE-208ENST00000479896 AMELXQ99217 191 aa8.8□□□□□ -1
PTPRE-208ENST00000479896 ANKHD1Q8IWZ3 2542 aaKnown RBP8.8□□□□□ -1
PTPRE-208ENST00000479896 Q6ZRU5 148 aa8.79□□□□□ -1
PTPRE-208ENST00000479896 MUC22E2RYF6 1773 aaPredicted RBP8.79□□□□□ -1
PTPRE-208ENST00000479896 FREM1Q5H8C1 2179 aa8.79□□□□□ -1
PTPRE-208ENST00000479896 ARHGAP21Q5T5U3 1957 aa8.79□□□□□ -1
PTPRE-208ENST00000479896 DSCAML1Q8TD84 2053 aa8.79□□□□□ -1
PTPRE-208ENST00000479896 MED12LQ86YW9 2145 aa8.78□□□□□ -1
PTPRE-208ENST00000479896 PCOTHQ58A44 107 aa8.78□□□□□ -1
PTPRE-208ENST00000479896 LINC00575Q6W349 94 aa8.78□□□□□ -1
PTPRE-208ENST00000479896 CEP192Q8TEP8 1941 aa8.78□□□□□ -1
PTPRE-208ENST00000479896 FAM229AH3BQW9 127 aa8.77□□□□□ -1.01
PTPRE-208ENST00000479896 H0Y9P7 68 aa8.77□□□□□ -1.01
PTPRE-208ENST00000479896 PRLHP81277 87 aa8.77□□□□□ -1.01
PTPRE-208ENST00000479896 Q6ZSN1 163 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms